Empidonax traillii (willow flycatcher): 114055252
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Entry
114055252 CDS
T05887
Symbol
CHSY1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
etl01100
Metabolic pathways
Module
etl_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
114055252 (CHSY1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
etl01003
]
114055252 (CHSY1)
Enzymes [BR:
etl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
114055252 (CHSY1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
114055252 (CHSY1)
Glycosyltransferases [BR:
etl01003
]
Glycan extension
O-Glycan
114055252 (CHSY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
114055252
NCBI-ProteinID:
XP_027734988
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MAGRGRRAWLSVLLGLVLGFVLASRLVLPRASELAAAARPHRARPQGCRPPPAAAAAAPP
RRPGPPAQSFLFVGVMTAQKYLRSRAVAAHRTWSKTIPGKVEFFSSEGSDTSIPIPIVPL
PGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDKLENFLRSLNSSEPLFL
GQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGECLREMYTTHEDVEVG
RCVRRFAGVQCVWSYEMQQLFYENYEKNKKGYIRDLRNSKIHRAITLHPNKNPPYQYRLH
SYMLSRKIAELRHRTVQLHREIVLMSKYSNTEIHKEDLQLGMPPSFMRFQPRHREEILEW
EFLTGKYLYSGADGQPPRRGMDSSQREALDDIIMQVMEMINANAKTRGRIIDFKEIQYGY
RRVNPMYGAEYVLDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFMEHEEMDAKELASK
INQDSGSLSFLSNSLKMFVPFQLSRSRAERKELKDKKINILIPLSGRFDMFARFMGNFEK
TCLIPNQNVKLVVLIFNSNSNPDKAKQIDLMREYRSKYPKADMQVLPVSGEFSRALALEV
GSSQFQNESLLFFCDVDLVFTAEFLQRCRANTVLGQQVYFPIIFSQYDPKIVYSGKVPSD
NHFAFTQKTGFWRNYGFGITCIYKGDLLQAGGFDVSIQGWGLEDVDLFNKVIQAGLKIFR
SQEIGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEIWFEKNDPNFGKSSNTN
GSVRTA
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcggccgccgcgcctggctcagcgtcctgctggggctggtgctgggcttc
gtgctcgcatcgcgcctcgtcctgccccgcgcctccgagctggcggcggcggcgcggccc
caccgagcccgcccgcagggctgccgcccgccgcccgccgccgccgccgccgccccgccg
cgccgccccggcccgccggctcagagcttcctcttcgtgggggtcatgacggcgcagaag
tacctgcggagccgcgccgtggccgcgcaccgaacgtggtccaaaaccattcctggcaag
gttgagttcttctccagcgagggttcggacacctctattcccatccccatcgtgccgctc
ccgggcgtagatgactcttacccaccccagaagaaatctttcatgatgctcaaatacatg
catgaccactacttggacaaatacgaatggtttatgagggctgacgacgacgtttacatc
aaaggggacaagctggagaacttcctgcggagcctgaacagcagcgagccgctcttcctg
gggcagaccgggctcggcaccaccgaggagatggggaagctggcgctggaaccgggcgag
aacttctgcatgggggggccaggagtgatcatgagccgggaggtgctgcggaggatggtg
ccccacatcggcgagtgcctgcgggagatgtacacgacccacgaggacgtggaagtgggg
agatgcgtgcggaggtttgcgggagtgcagtgcgtgtggtcctacgagatgcagcagctg
ttctacgagaattatgagaagaacaaaaagggctacatccgagacctgaggaacagcaaa
atacaccgagccataacgctgcaccccaacaagaaccccccgtaccagtacaggcttcac
agctacatgctgagccgcaagatagcggagctgcgccaccggaccgtgcagctgcaccgg
gagatcgtcctgatgagcaaatacagcaacaccgaaatccacaaagaagacctgcagctg
gggatgccgccctccttcatgcgattccagccccgccaccgggaagagatcttggagtgg
gagtttctcacaggaaaatatttgtattcgggtgccgacgggcagcccccgcggagagga
atggactcatcccagcgcgaagcgttggatgacatcattatgcaggtcatggaaatgatc
aacgccaacgccaagacccgggggaggatcatagatttcaaggaaatacagtatggctat
cgcagggtgaaccccatgtatggggcagagtacgttctggacttgttgctcctgtacaag
aagcacaaggggaagaagatgacggtccccgtccggaggcacgcgtacctgcagcagaca
ttcagcaagatccagttcatggagcacgaggagatggacgccaaagagctggccagcaaa
atcaaccaggactccggatccttgtcgttcctctccaactcgctgaagatgttcgttccc
ttccagctcagcagatccagagcagagaggaaggagctcaaagacaagaagatcaacatc
ctgattcctctctccgggcgtttcgacatgttcgcaaggttcatggggaattttgaaaag
acgtgcctcattccaaaccagaatgtcaagctggttgtcctgattttcaactccaactcc
aaccctgacaaagcgaagcagatcgatctgatgagggagtaccgctccaagtaccccaag
gctgacatgcaggtcctgccggtgtcgggggagttctcgagggcactggctctggaagtt
ggatcttctcagttccagaacgagtctttacttttcttctgtgatgttgacttagtgttc
accgcagaattcctccagcggtgtagagccaatacagttttgggtcaacaagtatatttt
cccatcatttttagccagtatgatccaaagattgtttatagtggaaaggttcctagtgac
aatcattttgccttcacccagaaaacaggtttctggaggaactatggctttggtatcacc
tgtatttacaaaggtgatcttcttcaagcaggtggctttgatgtctccatccaaggttgg
ggccttgaagacgtagatctgtttaacaaagtcattcaagctggcttaaaaattttccga
agccaagaaattggagtagtccacgtgcatcaccctgttttttgtgaccctaatcttgat
ccaaaacaatataaaatgtgcttggggtccaaagcttcaacttatgggtccacacaacag
ctggctgaaatatggtttgaaaaaaatgaccccaattttgggaaaagcagcaatactaat
ggctcagtgaggacagcctaa
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