Empidonax traillii (willow flycatcher): 114055307
Help
Entry
114055307 CDS
T05887
Symbol
AQR
Name
(RefSeq) LOW QUALITY PROTEIN: RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114055307 (AQR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etl03041
]
114055307 (AQR)
Spliceosome [BR:
etl03041
]
Complex B
Other components
Prp19-related factors
114055307 (AQR)
Complex C
114055307 (AQR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
SLFN-g3_helicase
DEAD
UvrD_C_2
AAA_16
AAA
Parvo_NS1
AAA_22
PhoH
DnaB_C
nSTAND3
NB-ARC
DUF4088
Motif
Other DBs
NCBI-GeneID:
114055307
NCBI-ProteinID:
XP_027735072
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MAATAASSAPPKKIVAPTVSQINAEYVTQLANKYWAPHVKKTLSFDLKVIEDVYTKEIVR
SKXQLMKYSLSLHSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKP
EHFPFFFKRILEASLVENESEYSLHEQTVLLLFLDHCFNSLEVDLIRGQVQQLISLPMWM
ALQPNRLEHELKKTPKLRKFWNLIKKNDAKMDEEARMQAYRERRFLSQLIQKFISVLKTI
PVSGPISMDKVHYCERFIELMLDLEALLPTRRWFNTVLDDSHLVVHCYLSSLAKREKEGH
LFCQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNV
AAVDTRDALVKLFGPLSSNVLHQVASYLCLLPPLAEGEETTYEKEFLLELLVSRHERRIS
QIQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLE
STYEIRQDIEDSVSRMKPWLSEYGGVVFGGWARMAQPIVSFTVVEVAKPNIGENWPMRVR
ADVTINLNVRDNIKDEWEGLRKHDVCFLITVRPMQPYGTKFDRRQPFVEQTGLVYVRGCE
IQGMLDEKGRVIEEGPEPKPRLKGDCRTYRVFLDPNQYQQDMTNTIQNGAEDVYETFNII
MRRKPKENNFKALLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFND
TFLSIDHLKASFPGYNVKVTVNNPVLHVPPFRITFPIKGGKGTKRKEDGSEENPEEAKTL
IVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQII
SNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGR
VNYVLARRLELLREVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWEEYISKVKVKGGK
LPEVTDVSSFFPFHQYFANAPQPVFKGKSYEEDMEIAEGCFRHIKKIFTQLEEFRAFELL
RSGLDRSKYLLVKEAKIIAMTCTHAALKRRDLVELGFKYDNILMEESAQILEIETFIPLL
LQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRIGVPTVDLDAQG
RARASLCNLYNWRYKNLGNLPHVQLLPEFRTANAGFLYDFQLINVEDFNGIGESEPNPYF
YQNLGEAEYVVAVFMYMCLLGYPADKISILTTYNGQKHLIRDVINQRCGNNPLIGRPNKV
TTVDRFQGQQNDYILLSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELT
PAFSQLTARPLHLHIVPTECFPTARQNGERPSHQIHVIKNMPQMANFVYNMYMHMIQSTR
HHHQQHLLPPPAMIEEPEITQTEETEVEGEGQDVQEDAEENTVLEEMMKEGGLSVVEVDE
HRKMPEHPGRDSDSGDSEPENETEK
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacggcggcgtcctcggccccgccgaagaagatcgtggcacccacggtgtcg
cagatcaacgcggagtacgtgacacagttagcaaataaatattgggctccacatgtgaag
aaaacattgtcttttgatttaaaggtcattgaagatgtatatacaaaagaaattgtcagg
tcaaagtaacaactaatgaaatactctttgtctcttcacagtcagtaccttgaaaattac
ttatggatgaattattctccagaggtgtccagtaaggcatatttaatgtcaatctgctgt
atggtgaatgagaagttcagagagaatgtccctgcgtgggagacattcaaaaaaaagcca
gaacactttcctttctttttcaaacgaatactggaagcatcgctggttgaaaatgagagt
gagtactctctgcatgaacagacagtcctgctgcttttccttgatcactgcttcaatagt
ttggaagtggacttgatcagaggtcaggtgcagcagctcatttccctaccgatgtggatg
gctctacaacctaatcgactggaacatgagctgaaaaagacaccaaaactaagaaaattc
tggaatctaattaagaaaaatgatgcaaaaatggatgaagaggcaagaatgcaagcgtat
cgggagagaagatttctttcacagctcattcagaaattcatttctgtgctgaagacgata
cctgtctcgggtcctatttctatggacaaagttcattattgtgaaaggtttattgaactc
atgctagacctcgaggctttgcttcccacacggcgctggttcaatacagtgttggatgac
tcccatctggttgttcactgttacctgtctagtcttgctaaaagagagaaagagggtcac
ctcttctgccagcttttagatatgcttaaattctacactggctttgaaatcaatgatcag
actggaaatgctttgacagagaatgagatgacaacaattcactacgacagaattacttct
ctacagagagccgcatttgcacatttcccggagttatatgactttgcactctcaaatgta
gctgcagtagatactcgtgatgcactggtgaagttatttggaccccttagctccaacgtt
ctccaccaggtggcgtcgtacctgtgcctcctgccgcccctggccgaaggggaagagacg
acctacgagaaggagtttctgctggagttgctggtttcccgtcatgagcgacgaatatct
caaattcagcaactcaaccagatgcctctttatcccacagagaagattatttgggatgaa
aatattgtaccaactgaatattattctggagaaggctgtcttgcacttcccaaattgaat
ctacagtttctgactcttcatgactacctgctgaggaacttcaatcttttccgcttagag
tctacctatgaaatcagacaggacattgaagatagtgtcagtaggatgaagccatggtta
tcggaatacggaggtgtggtctttggtggatgggctaggatggcacaacccattgtgtct
tttacggtggtggaggtggcaaagcccaatattggtgaaaactggcccatgcgagtaaga
gcagatgttacaattaatttgaatgtccgagataacatcaaagatgaatgggaaggtctg
cgtaaacatgatgtctgctttttgattacggtgcgtcccatgcaaccttatggcaccaag
tttgaccgacggcaaccttttgtggagcaaactggtctggtgtatgtcagaggctgtgaa
attcagggcatgttggatgagaaagggcgtgttattgaagaaggacctgaacccaagcca
agacttaaaggtgattgcagaacatacagagtatttctggacccaaaccaatatcaacaa
gacatgaccaatacaatccaaaatggagcagaagatgtttatgagacatttaatataata
atgagaagaaaaccaaaagaaaacaatttcaaggctcttctggagactattaggaatttg
atgaacacagattgtgtggttcctgactggctgcatgacatcattcttggatatggagac
ccaagtagtgcacattattccaaaatgccaaatcaaattgcaactctggattttaatgac
actttcctgtccattgatcacttaaaagctagctttcctggatacaatgttaaagtcact
gttaacaatccagttctgcacgtacctcccttcagaataactttcccaataaagggaggt
aaaggaactaaaagaaaagaggatggaagtgaagagaaccccgaagaagctaaaacactg
attgtagagcctcatgtcattccaaacaggggaccatacccatataatcaaccaaaacgc
aatactattcaatttacccacactcagattgaagctattcgtgcaggaatgcagcctgga
ctaactatggtagtgggtccaccaggtactggaaaaactgatgtagcagtccagataata
tccaatctttatcataatttcccagaacaacgaactcttatagttacccactctaatcag
gccttgaaccagctgtttgaaaaaatcatggctctagacattgatgagcgccaccttctg
cgtctgggtcatggagaagaggaattagagacagagaaagatttcagcaggtatggaaga
gttaattatgtgctggctcgaagacttgaacttctgcgagaagttgggcgactacaagag
agtcttggagtcccaggagatgtttcttacacttgtgaaacagctggccactttttctta
taccaagtaatgtctcgttgggaagagtatatcagcaaagtgaaagttaaaggtggaaag
ttgccagaggtcacagatgtctccagtttctttcctttccaccagtattttgcaaatgct
cctcaaccagttttcaaaggcaaatcctatgaagaagatatggaaattgctgaagggtgt
tttagacatattaagaaaatattcactcagcttgaggaattcagagcatttgaacttctc
cgcagtggcctggatagatccaaatacctgttggtgaaagaagcaaaaatcattgccatg
acttgtactcatgctgctctgaaacgacgtgacctggttgaattaggcttcaaatatgac
aacatcctaatggaagagtctgctcagatcctggagatagaaacctttatacctctcctt
ttgcagaacccccaagatggattcagtcgtttgaagcggtggattatgattggtgatcat
catcagttgccgccagtcattaagaacatggcttttcaaaaatattccaacatggagcag
tctctttttacacggtttgttcgtattggagtgccaactgtggatttggatgcacaagga
agagcaagagcaagtctatgtaacctctacaactggcgttacaagaatctaggtaacttg
cctcatgtgcagcttctgccagagttcagaacagccaatgctgggtttttgtacgacttc
cagcttataaatgtagaagacttcaacggtataggagagtctgaacccaatccctatttc
tatcagaatcttggtgaagcagagtacgttgtagcagttttcatgtatatgtgcctactt
ggttatcctgcagacaagataagtatcctgacaacatacaatggacagaaacacctgatc
cgtgatgtcattaatcagcggtgtggaaataatccactcattggacggccaaacaaggta
acaactgtggacagatttcaaggtcaacaaaatgattatattctcctttcactagtgcgt
accaaagctgtgggccaccttagggatgttcgacgattggtcgttgccatgtcaagagcc
agacttggactttatatctttgcaagggtatcactatttcagaactgttttgaactaact
ccagctttcagccaactcacagctcgaccgcttcacctccatattgttcccacagaatgt
tttccaacagcaagacagaatggagaaagaccatctcaccaaatacatgttattaagaac
atgcctcagatggccaactttgtgtacaatatgtatatgcacatgattcagagtacccgc
caccatcatcaacagcatttactgcccccacctgccatgattgaagaaccagaaattact
caaactgaagagactgaagtagaaggtgaagggcaagacgtgcaggaagatgcagaagaa
aatacagtactggaagaaatgatgaaggaaggaggattgagtgtggtagaagtggatgaa
catcgaaaaatgccagaacaccccggaagagacagtgacagtggagacagtgaacctgag
aatgagactgaaaagtga
DBGET
integrated database retrieval system
