Empidonax traillii (willow flycatcher): 114055376
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Entry
114055376 CDS
T05887
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etl03041
]
114055376 (DDX17)
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114055376 (DDX17)
Spliceosome [BR:
etl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114055376 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114055376
NCBI-ProteinID:
XP_027735218
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MRGFGDRGRDRDRGGFGASRGGPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEV
ARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQG
FPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQ
QVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGN
LELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRD
GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGG
GGGRSRYRTSSSVNNPNLMYQEECDRRLRGVKEGRRDSGGFRDRERADSYANGANKTYGS
AYGSPNSAFGAAQSQYGYTQGSYGAAAYGTSGYGTAEYSASGYGASTTAATAGRTSQSTT
QQQYAGMVGRSGQQPQPLMSQQFPQPPATNVMGYMGQTATYQYPPPPPPPPPSRK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcttcggggaccggggccgcgaccgagaccgcggcgggtttggagcaagtcgc
ggaggtcctcttcctccaaagaaatttgggaacccaggagaacgcttgcgtaagaaaaaa
tgggatttgaatgaactgcccaagtttgaaaagaatttttatgtggaacacccggaagtg
gccaggcttaccccatatgaagttgaagaattgcgaaggaagaaagagataacaattcga
ggaatggagggctgccccaaaccagtgtttgccttccaccagtgcagctttccccaatat
gtgatggatgccttgatggaccagaacttcacagaacccactccaattcagtgccaaggc
tttccactcgccctcagcggtcgtgatatggtgggcattgcgcagactggctctgggaag
actctggcatacttgctgcctgcaattgttcacatcaaccatcagccatatttggagaga
ggggatggcccaatctgtctcgttctagcacctactagagagttggcccagcaagtgcag
caggtggctgatgattatggcaagtgttcaagactgaagagtacttgcatatacggagga
gcacccaaaggtccccagatcagagatctagaaagaggtgtggagatctgcattgctaca
ccaggtcgcctgattgacttccttgaggctggaaagaccaaccttcgtcggtgtacatac
ttggtgttggatgaagcagacagaatgttggacatggggtttgagccccaaattcgtaaa
attgttgaccagatcaggcctgaccgacagactctgatgtggagtgccacctggccaaaa
gaagtgcgccagcttgctgaggacttcctgcaggactatgttcagatcaatgtgggaaac
ttggagctgagtgccaaccacaatatcctgcagatagtggatgtatgcatggaaagtgag
aaagaccataaactgatacaactgatggaagaaatcatggcagagaaggaaaacaagact
atcatctttgtggagacgaagaggcgatgtgatgatctcactcgaaggatgcgcagagat
ggttggccagctatgtgtatccatggagacaagagtcaaccagaaagagattgggtgctt
aatgagtttcgttctggaaaggctcctatcctcattgctaccgacgttgcatctcgtggg
ctagatgtggaagatgttaaatttgtgataaactacgactatccgaacagctccgaagat
tacgtgcaccgtattggccgtaccgcacgtagtaccaacaaaggtactgcctacaccttc
ttcacaccaggaaacctgaaacaagccagggagcttatcaaagtgttggaagaagctaat
caagccatcaatccaaagctgatgcagcttgtggaccacagaggaggaggaggtggtggt
ggaggaggtcgttctcgttaccgaacgagcagttcagtaaacaaccctaacctgatgtac
caggaagagtgtgacaggaggctccggggagtgaaagagggccggagagactcaggtggc
ttcagagaccgtgagcgtgctgacagttacgccaacggagccaacaagacctatggcagt
gcctacgggagcccaaattctgcttttggggcagcacagagccagtatggttacactcaa
gggagctatggagcagctgcctatggcacgagtggctatggcactgcagagtacagtgct
agtggctatggtgccagcaccacagctgccaccgctgggagaacctcacagagcactacc
caacagcagtatgcagggatggtggggcgctcaggccagcagccacagccgctcatgtca
caacagtttccgcagccccctgccactaacgtgatgggctatatgggacagactgccacc
taccagtacccaccccctcccccacccccgcccccctcccgcaaatga
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integrated database retrieval system
