Empidonax traillii (willow flycatcher): 114055516
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Entry
114055516 CDS
T05887
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etl03036
]
114055516 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
etl04812
]
114055516 (CLASP1)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
114055516 (CLASP1)
Cytoskeleton proteins [BR:
etl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
114055516 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
HEAT_2
Cnd1
RTP1_C1
PDS5
HEAT_DAAF5
ParcG
MMS19_N
MMS19_C
TAN
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
114055516
NCBI-ProteinID:
XP_027735546
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MEPSMEYCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGIDIISALVSRLQDRFKAQIGTVLPSLLDRLGDSKDSVREQDQTLLLKIME
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSSGDKL
FDDEDSVDGNRPSSASSSTSSKAPANSRRVGMGTTRRLGSAPLGSKSSTAKEGAGAVDEE
DFIKAFEDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRVSALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKVMATSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTPGSLQRSRS
DVDVNAAASAKSKVTSSGSSTPFSSAAALPPGSYASLGRIRTRRQSSGSATSVTSTPADT
RGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSSYGGLSGGTSRVQPVPSSSEKRSK
IPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLASRRHS
RSTSALSTADSVGQSDRFGLGQPGRIPASVNALRVLSTSTDLEAAVADALLLGDSRSKKK
PVRRRYEPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWS
ERKEGLIGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKD
DLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTP
NLKVKVAILKYIESLARQMDPTDFGNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISL
FELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTLGRTPSRHSSSRTSP
LTSPTNCSHGGLSPSRLWGWSADGLSKHPPPLSQPNSIPTAPSHKTFRRSYSPSMLDYDT
ENLNSDEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGLALPTGDVRG
GSDIVEGGRMALDNKTSLLNTQPPRAFSGPRAREYNPYPYADTINTYDKTALKEAVFDDD
MDQLRDEGPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDNLGVWEEHFKTIL
LLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAE
EAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQLLPDIIPG
LLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNS
SSSSDVSTHS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagtatggagtactgcttggcgcaggtgctgcagaaggatgttggaaagaga
ctccaggttggccaggaactgattgattacttctcagataaacagaagtcagctgacctc
gaacatgatcagactatgctggataaaatggttgatggacttgccacttcttgggtaaat
tccagcaattataaggtggttctcctggggattgacatcatttctgcactcgtgtcccgc
ttgcaagatcgcttcaaggcccagattggcacagtgctgccaagtttacttgatagactg
ggagattctaaagactctgtgagggagcaggatcagaccttgctgctgaaaatcatggaa
caagctgctaaccctcagtacgtgtgggacaggatgctgggaggattcaaacacaagaat
tttcggacaagagaagggatttgcctctgccttattgcaacactcaatgcatctggagct
cagagtttaacgctgagtaagatagtgccacatatatgtaacttacttggagatccaaac
agccaggttcgagatgcagcaataaacagcctcgtggaaatttacagacatgttggtgaa
cgtgtaagggctgatctcagtaaaaaaggattaccacaatctcggttgaatgtaattttt
acaaaattcgatgaggtccaaaaatctggaaacatgatccagagttcaggtgataaactt
tttgatgatgaagactccgtggatgggaacagaccttcctcagccagctcctctacatct
tccaaggctcctgcaaactcgcgcagagttgggatggggactacccgcagactcgggtct
gcacctctgggctccaagtcttctacagccaaagagggagcaggtgctgtggatgaagaa
gacttcattaaggcatttgaagatgtcccaacggttcagatttattccagccgggatctt
gaggaatccataaacaaaatccgagagatactatcagatgacaagcacgactgggaacag
agagtttctgcgttgaaaaagatccgctccttacttttggctggagctgcagaatatgat
aacttcttccaacacttaaggcttttggatggagcatttaaattatctgctaaagatctg
cgctctcaagtagttcgagaggcttgtatcacgttgggacatttgtcatcagttctggga
aacaagtttgaccatggggcagaagccatcatgccaacaatttttaatctaattccgaat
agtgccaaagtcatggccacttctggtgttgtagcagttagattaatcattcgacatacg
cacatccctcggttaatacccatcataaccagtaattgtacctccaagtctgttgcagtt
agaaggcgctgttatgaatttttagacttgctgttgcaggagtggcaaacacactcccta
gaaagacacatatcagtgttagctgaaacaataaagaagggaattcatgatgcagactct
gaagccaggatagaggcaagaaagtgttactggggtttccacagtcacttcagccgagag
gcagagcatttgtaccacaccttggagtcttcctaccagaaggccctgcagtcgcatttg
aagaactctgacagcatcgtgtccttgccacagtcagatcgctcctcctccagctcccag
gagagtctcaaccgtccgttgtctgccaaaagaagtcctactggaagtaccacatctaga
gcatctacagtaagtacaaaatctgtgtcaacaccaggatctctgcagcgatcccgcagt
gacgtcgatgtgaatgcagcagctagtgccaagtcaaaagtgacgtcttctggatcatcc
acccccttcagttctgctgcagccttgcccccagggtcatacgcatcactaggtcggatc
cgtacaaggagacagagctctggcagtgccacaagtgtcacctcaacgcctgccgatact
cgaggccgcagccgggctaaagtagtttcccagtcccagcgatccagatcagctaatcct
gctggtgctggcagccgatccagttctccgggtaagctcttaggaagctcctatggtggc
ctgagcggcggaacatccagagtccagccagtgccatcatcttcagagaagcgcagcaag
atccctcggagccagggatgcagtcgagagacgagtcccaacagaataggactagcacgg
agcagtcgtatcccccgacccagcatgagtcaggggtgcagtcgtgataccagccgtgag
agcagtcgagatacaagccctgctcggggctttcctccacttgcttctcgacgtcattcc
aggtccactagtgctctctccactgctgattctgttgggcagtcagaccggtttggactc
ggacagccaggcaggattcctgcttctgtgaatgccctgcgagtcctgagcaccagcaca
gatctggaggctgctgtggccgatgcactgctgttaggagactccaggagcaagaaaaag
ccagtgagaagaagatatgaaccctatgggatgtactccgatgacgatgccaacagtgac
gcatcaagcgcttgctcggagcgctcctatggctccaggaatgggggcattccacactac
ctgcggcagacggaagatgtggctgaggtcctgaaccactgtgccagctccaactggtct
gaaaggaaggaagggcttataggtcttcagaatttactgaaaagccagcggacactgagc
cgagtcgagttaaaaaggctgtgtgaaatatttactcgcatgtttgctgaccctcacagc
aagagagtcttcagcatgtttctggaaaccctggttgatttcatcatcattcataaagat
gacttacaggactggctttttgttctcctgacccagttgctaaagaaaatgggagcagat
ttgttggggtctgtgcaggcaaaagttcaaaaagctctggatgtcaccagggattctttt
ccgtttgatcagcaatttaacattttgatgaggtttattgtagatcagacccaaacacca
aatctgaaggtgaaagttgctatcctgaagtatattgagtccttggcaagacagatggat
ccaacagactttggaaactccagtgagacaaggcttgctgtatctagaattataacttgg
acaacagaaccaaagagctcggatgtgagaaaggcagcacaaatagtcctgatttctctc
tttgaattgaacactcctgagtttaccatgttacttggtgccttgccaaaaacattccag
gatggtgctaccaagctcctgcacaaccacctcaagaactccagtaacaccagtgtgggt
tcccccagcaatacccttggtcgaactccttcccggcactccagcagcagaaccagcccc
ttaacttcacctaccaactgttcccatggtggactgtctccaagtcggctctggggttgg
agtgcagatgggctgtcgaagcacccccctcccctttctcagcctaactccatccccact
gctccttcccacaagactttcagacgctcttactctcccagtatgctggattatgacacg
gagaacctaaattctgatgaaatctacagctctcttcgtggggtcacagaagcgattgaa
aagtttagtttccgtagtcaagaggacctgaatgagccaatcaaacgtgatggaaagaaa
gactgtgacattgtgtctcgagatggtggccttgctctccctaccggagatgtccgtgga
ggcagtgacattgtggaaggtggaaggatggctctggataacaaaacctccctgctgaac
acgcagcctccccgcgccttttcagggccacgtgctcgggagtataacccctatccttat
gctgacacaattaacacgtacgacaagactgccctgaaggaagcagtgttcgatgatgac
atggaccagcttcgggatgaaggacccattgaccactcggatttggtggctgatcttctg
aaagagctttccaaccacaacgagcgggtggaggagcggaaaggagctctcctggaattg
ctaaagatcacaagggaggataatctcggagtttgggaagagcacttcaaaaccattctg
ctcttgctgctggaaacgcttggagacaaagatcattcaataagagccctggcactgcga
gtcctgagagagatcctacggaaccagccggcaaggtttaagaactatgcggagctgact
atcatgaaaacactggaagcacataaggattcccacaaggaggtcgtcagagctgccgaa
gaagctgcttccacgctggcgagttccatccaccccgagcagtgcatcaaggtgctttgc
cctatcattcagactgcagattatccaattaacttggctgccatcaaaatgcagacaaaa
gtcatcgagaggatttccaaggaatcgttgcatcagctcctacctgatatcattcctggg
ttgttacagggttacgataacacagagagcagtgtccgtaaagccagcgtgttttgcctg
gtggcaatttattcagtaattggagaagaactgaaacctcatctcgcacagctcacagga
agcaagatgaagctactaaacttgtatataaagagggcccagaccaccaacagcaacagc
agttcctcttcagatgtttcaacgcacagttaa
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integrated database retrieval system
