Empidonax traillii (willow flycatcher): 114055611
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Entry
114055611 CDS
T05887
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etl03041
]
114055611 (PTBP2)
Spliceosome [BR:
etl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114055611 (PTBP2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_NFXL1
MSP1a
Motif
Other DBs
NCBI-GeneID:
114055611
NCBI-ProteinID:
XP_027735726
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MDGIVTDVAVGVKRGSDELLSGSVLNSPNSNMSSMVVTANGNDNKKFKSDDKMDGAPSRV
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPH
LRNQPIYIQYSNHKELKTDNTLNQYEEYHRAQAVLQAVTAVQATNAPISGTTVSESAVTP
AQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQFGDPVNAQQAK
QALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPTLDPAIAAAFA
KETSLLGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVAAGGNTVLLVSNLNEEMV
TPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLS
KHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEED
LRTLFANTGGTVKAFKFFQRDHKMALLQMSTVEEAIQALIDLHNYNLGESHHLRVSFSKS
TI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcactgatgttgcagttggtgttaagagaggatctgacgaacttctt
tcaggcagtgtactcaatagcccgaactctaacatgagcagcatggtagttactgctaat
ggtaatgacaacaagaaattcaaaagtgatgataaaatggatggggctccttctcgtgtt
cttcatatcaggaaattgcctggggaagtgacagaaacagaagttattgctttaggttta
ccctttggtaaagtaaccaacattctgatgctgaaaggaaaaaatcaggcatttttggaa
cttgctacagaagaggcagctatcactatggttaattactactctgctgtgacacctcat
cttcgtaaccaacctatttatatccagtattccaatcataaagaattaaagactgataac
acacttaaccagtatgaggagtatcatcgggcccaagctgttcttcaggcagtgacggct
gtgcaggcaacaaacgctcccattagtgggaccactgttagtgagagtgcagtgactcca
gcacagagtccagtacttagaataattattgacaatatgtactatccagtaaccctggat
gttcttcatcagatattctctaaatttggtgctgtattgaagataatcacattcacaaag
aataaccagtttcaagctttactgcagtttggtgatccagtaaatgcacagcaagcaaaa
caagccttagatggtcaaaatatttataatgcttgctgtaccctacggattgatttttcc
aaattggtgaatttgaatgtcaagtacaacaacgataagagcagggactacactcgtcct
gaccttccatctggtgatggacagccaacgctggacccagctattgctgcagcatttgca
aaggagacctctcttctagggcttcctgttgcagctgttccaggggctctgagtcctttg
gctattccaaatgctgctgctgcagctgcagctgctgctgctggtcgtgtaggaatgcct
ggagttgcagctggtggcaatacagtcctcctggttagcaatttaaatgaagagatggtt
acgccccaaagtctgtttaccctcttcggtgtttatggtgatgtgcagcgtgtgaagatt
ttatacaataagaaagatagtgctcttatacagatggctgatggaaaccagtcacagctg
gccatgagccatcttaatggacaaaaaatgtacggaaagattattcgggttaccctttct
aaacatcaaacagtacaactacctcgagagggacttgatgaccaagggctgactaaagat
tttggtaattcacctttgcatcgcttcaagaaacctggttcaaagaactttcaaaatata
tttcctccttctgcaacacttcatctgtccaatattccaccatcagtagcagaagaggat
ctacgcacattgtttgctaacactggaggcactgtgaaagcatttaaattttttcaaaga
gatcacaagatggcacttcttcagatgtcaacagtagaagaagctattcaggctttgatt
gatcttcacaattacaatttgggagaaagtcaccatctgagagtttctttctccaagtca
actatttaa
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