Empidonax traillii (willow flycatcher): 114055805
Help
Entry
114055805 CDS
T05887
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03020
RNA polymerase
etl04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114055805 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
114055805 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etl03021
]
114055805 (POLR3A)
Enzymes [BR:
etl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114055805 (POLR3A)
Transcription machinery [BR:
etl03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
114055805 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
114055805
NCBI-ProteinID:
XP_027736088
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHSPLQYGVLDHRM
GTSEKDRPCETCGKSLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCRIMLSVE
ERKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSTFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFRRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVCNGPDVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCRNEPALSKNELMLTSESIMKKNEFLC
CQDSFLQTLTETGYEKYNEEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKAISTPIITAHLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICISKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYV
LQSLKEELPKVVVQGIPEVSRAVIHVDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSS
NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
ESTPPRRPLIFDNSEFHIPIVT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagaccgatgtggccaagaaaataagccacatctgcttt
ggcatgaaatctccagaagagatgcgacaacaagctcacattcaagtggtcagcaaaaac
ttgtatagtcaggacaaccatcactctccactgcagtatggggtgctggaccatcgcatg
ggaaccagtgaaaaagaccgtccctgtgaaacctgtggaaaaagtctggctgattgttta
ggacattatgggtacattgacttagagctgccatgttttcatgttggatacttcaaagct
gtgataggcatcttacagatgatctgcaaaacctgttgccgtatcatgctgtcagtggaa
gaaagaaaacagtttttggattacctaaagcgacctggccttacataccttcagaagaga
gggctaaaaaagaaagtgtctgagaagtgccgaaagaaaaacacttgtccttactgtggg
gcctttaatggaactgtgaagaaatgtggtttgttgaaaataatacatgaaaagtacaag
acaaacaagaaagtcgtagatccaatagtatctacttttctgcagtcctttgaaactgcc
attgaacataacaaagaagtagaacccttactgggaagagctcaggaaaacttgaatcct
ttggtagtattgaacctctttagaagaatcccagcagaagacattcctctacttctaatg
aacccagaagcaggtaaaccttcagatttgatcctcacacgactcttggtgcctccactg
tgtatcagaccctctgtggtgagtgacctgaagtcgggcaccaatgaagacgacttgaca
atgaaactgacagagatcattttcctcaatgatgtaataaaaaagcataggatatcagga
gccaaaacacagatgattatggaagactgggattttcttcagctacagtgtgccctgtac
attaatagtgagctctcgggaattcctctcaacatggcacctaagaaatggaccagaggt
tttgttcagaggcttaagggaaagcaaggtcgttttagaggcaatctgtctggaaagcga
gtggatttttctggcagaacagtaatttctcctgatcctaacttaagaatagatgaagta
gcagtgcctattcatgttgctaaaatactaacctttcctgaaaaggtgaacaaagcaaat
attaattttatgaggaaacttgtttgcaatggtcctgatgttcaccctggagccaacttc
atacagcaaaggcacacccaaatgaaaagatttttgaaatatgggaaccgagaaaagatg
gcccaggagctgaaatttggtgatatcgtggagcgacaccttatagatggtgacatagtc
ctgttcaaccgccagccctcccttcacaagctgagcatcatggctcacattgctagagta
aaacctcataggacattcagattcaatgaatgtgtctgcacaccatacaatgcagacttt
gatggagatgagatgaaccttcaccttcctcagacggaagaagcaaaagcagaagcactt
gttttaatggggactaaagcaaacttggtaacaccaagaaatggagaacctcttattgct
gctattcaggattttctcacaggtgcctatcttcttacattaaaagataccttttttgat
cgagccaaagcctgtcaaattattgcttctattctggttggcaaggatgaaaagattaaa
gttcgcctcccacccccagcaattctgaagcctgtaacactctggacaggaaaacaggtt
ttcagcctcattctcaaacccagtgatgattgtcctgtaaaagccaatctacgaacaaag
ggcaaacaatattgtggcaaaggggaggacctgtgttacaacgattcttatgtcacaatt
caaaacagtgagttaatgagtggcagtatggacaaaggaacactgggttcgggatccaag
aacaacattttctacatcttgttgagagactggggacaggtggaagctgcggatgccatg
tcacgtctagccagacttgctccagtctatctctctaaccgtggcttttcaattggaatt
ggtgatgtgacccctggtcagggcctgctaaaagctaagtatgagctcctgaatgctggc
tataagaaatgtgatgagtatattgaagctctgaacactggcaagctacagcagcagcct
ggttgtactgcagaagagacactagaggccttgatccttaaagaactctccgtcatcaga
gatcacgctggcagcgcctgtctcagagaactggacaagagcaacagtccccttatcatg
gccctctgtggttctaaaggctccttcattaatatatcccagatgattgcttgtgtaggt
cagcaggctatcagtgggtcccgcgttcctgatggatttgagaacagatctttgcctcac
tttgagaagcattctaagctccctgcagcaaaaggctttgttgctaacagcttctattct
gggttgactcccactgaattttttttccatacaatggcgggtcgagaaggtctggttgac
acagctgtgaaaacagctgaaactggatatatgcagaggcggctggtaaaatcactcgaa
gatctttgctcacagtatgacttaacagtcagaagttctactggtgacattatacagttt
atttatggaggagatggattggatcctgcagctatggaagggaaggatgagccactggaa
ttcaagcgagttctagataatatcagggctgtgtatccgtgccgaaatgaaccagccctc
agtaaaaatgaattgatgttaacgtctgagtccatcatgaagaagaatgaattcctttgc
tgccaagacagttttctgcagacattaactgagacaggttatgaaaaatataatgaggaa
attaaaaaattcatcaaaggcgtttctgagaagataaaaaaaactagagacaagtatgga
attaatgacaatggcacaacagagccacgagttttatatcagttggataggattactcca
acacaattagagaagtttctagagacttgtagagacaaatacatgagagcacagatggag
cctggttctgcagtaggagctctttgtgcacagagtattggtgagcctggcacacaaatg
actctgaagactttccattttgctggtgttgcttcaatgaacattactttgggtgtgcca
agaatcaaagaaatcattaatgcttcaaaggctattagcacccctattataacagcacac
ttggacaaagatgatgatcctgattttgcccgtctggttaaaggaagaattgagaaaact
ttgttaggagagatttctgaatatattgaagaagtgtttctgccagatgattgtttcatc
ctagtgaagctgtctttagagcgcattagactgctgaggttagaggtgaatgcagagact
gtgcgctactccatttgcatttctaaactcagagtaaagcctggggatgttgctgtccat
ggagaagcagttgtatgtgtgacccctcgtgaaaatagcaagagttcaatgtattatgtc
ttgcagtccctgaaggaagaactaccgaaggttgtagtgcaaggtataccagaggtttcc
agagctgtcattcatgttgatgaacaaagtggaaaggaaaagtacaaacttctagttgaa
ggtgataatctacgagctgttatggctactcatggagtgaaaggaacaaaaacatcctct
aacaacacttatgaggtggagaaaacactaggaattgaagctgctcggacaaccattatc
aatgagattcagtatacaatggtgaaccacggtatgagcattgacaggagacatgttatg
ttgctgtctgatctaatgacttacaagggtgaagtgctgggcattactaggtttggactg
gcaaaaatgaaggaaagtgtcttgatgctggcttcttttgaaaagactgcagaccatctc
tttgatgctgcctactttggacagaaggattctgtttgtggtgtctctgagtgcatcatc
atgggaattccaatgaatattgggacgggactttttaaactgttgcacaaagcagacaaa
gaatcaacccctcctaggaggcctctgatatttgataatagtgaatttcatattcccatt
gttacatag
DBGET
integrated database retrieval system
