Empidonax traillii (willow flycatcher): 114056009
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Entry
114056009 CDS
T05887
Symbol
MLH3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114056009 (MLH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etl03400
]
114056009 (MLH3)
DNA repair and recombination proteins [BR:
etl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
114056009 (MLH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
114056009
NCBI-ProteinID:
XP_027736585
LinkDB
All DBs
Position
Unknown
AA seq
1446 aa
AA seq
DB search
MIKPLVEDVRTRLRSGVTVSSLGQCVEELVLNSIDAKATCVAIRVDLEAFKIQVVDNGSG
MGKEDLKAIGKRYFTSKCSSVGDLEKLTFYGFRGEAVASIANVASVVEISSKTSRTAKTF
VKLFHNGQPLEVCEAELNRPSGGTTVTVCNLFHQLPVRRKCMDPVLEFERVRQKVEAVSL
MHPSVSLSLRNDVSCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREINHKSGGFEISGFIS
TEGHYNKNMQFLYVNRRLVLKTRIHKLIDFLLRKESVICKAKGVPASRQAGSSPGRHRCG
PDLYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCVEEGVKIFLKREHLFIEPCS
EDIREFNEDNDFCLHSAPVLKTSVLDKKSIQESFKKACDEILDSYEMCTLQSKDVKRKSI
TGKKKSSLTELGKNVQETEIAPNQKTAELSNPFSNNKAEIPLPDEDGTASDFIKSDTSEQ
EPKYSKSSKKASDTHLKLSESLRSSFSGGPRSEIRAIDNCGDLQDCAQNNIKDVGSHQGK
VTQKSNNVCILNKDVTQSLPEREDPTETAVGPETVSGSSLMRHCNARRDRETTEVIDDAR
RRCISSIPSKLCSTSLIRCVTQSEPPRDSEQTEANLELNTQCKPGSVSAKDIFGHKLNFA
IQSLNHKGISSNTNKEYAASYTRKACMTDGNKNKTLPGQVREEIAMPTATSKRCYETLND
TELPLPTSSVIPHKKIVIKRTRRQITVPRPQSSKKLSMSTQLGSLEKFRRYYGRVESTLP
TPISERSELDLTVLNSQTNCDISKNDCVNHGNLSSCEIPPVEGTDSNTSQAFGSLEKTLF
CSGETSQDKQALCQSPLTLSDYALLSGKKTSCKRSPGSLSSKLSRMKTDHKEVEQHGEQF
QADSNRKDDHTFDLESSNNDFLYDTSQTSKSSVEKVREHNNSVSKGIACSQSDDVVAESV
ESSVSPSPLSSIEGEYTVSSGSILSLPDKNDCTSMICKDKSMLDESSSQDKDAEVPHVTL
QSNLEFSADNTSTGNPRSDLCCSVWLQDFDASSGKTIYINKATGLSTYGTPPSERFQAAC
VQDITTMAVNVVSENGFQFRCHPFRSEIVLPFLPRPQNEKTQASQDLRDIKGKSLQSLLL
EWDNPVFVPCPEIAVDVTSGQADSLAVKIHNILYPYRFTKDMVHSMQVLQQVDNKFIACL
INTRNEMDKKADGNLLILVDQHAAHERIRLEQLIADSYEKETSACGKKKILSSSISPPLE
IEVTEEQRRFLRCCYKNLVDLGLELSFPEANSSVILVRKVPMCFMEREANELRRKRQPIT
KSIVEELIQEQIELVQTTGGAARGTLPLTFLKVLASQACHGAIKFNEHLTLEESCGLIEA
LSSCKLPFQCAHGRPSMLPLADIDHLQQEEQPKPNLSRLRKMVRAWQLFGKKGPYSKKVK
TVSCNL
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacctttggtggaagatgtgcgaaccaggctgcgttctggagtgactgtcagc
tcccttggccagtgtgttgaggagcttgtcctcaacagtattgatgccaaagcaacatgt
gtagctatcagggtggatttggaagcttttaagatccaggtggtggacaatggctctggg
atggggaaagaggacttaaaggctatcggaaagagatacttcaccagcaagtgcagttca
gtgggagacttggagaaactgacattctatggcttcagaggggaggctgtggcaagtata
gccaacgtggccagtgtagtagaaatttcatctaagacaagcaggacagccaaaactttt
gtgaaactatttcacaatggacaaccactggaagtatgcgaagctgaattgaacagacca
agtggcggaactacagtcactgtgtgcaatctgttccatcagttaccggtgaggagaaag
tgtatggatcctgtgttggaattcgaaagagtgagacagaaggtagaggctgtttcacta
atgcatccttctgtctccctttctttaaggaacgatgtttcttgttctatggtgcttcaa
ctccctaagacaagagatgtatactctcgtttttgtcaaatttatggactgggcagatcc
cagaagttgcgagaaataaatcacaaatctgggggatttgagataagtggttttatcagt
actgagggacattacaataagaatatgcagttcttgtatgtgaatagaaggcttgtttta
aagacaagaatacataaactaattgattttttattaagaaaagaaagtgtaatttgcaaa
gcaaaaggtgtccctgcgagccggcaggctggttcaagtcctggccgccatcgctgtggg
ccagatttatacgggatctttattctcaatgtgacctgtgcatacagtgactacgacgtg
tgcctggaacctgcaaagactctaattgagttccagaactgggatgttcttctaacttgc
gtagaggaaggagtgaaaatatttttgaaacgagaacatttatttattgaaccgtgtagt
gaggacatcagagaatttaatgaagacaatgacttctgtttgcacagtgctccagttctg
aagacctcagtccttgacaagaagagcatccaagaaagtttcaagaaagcatgtgatgaa
attttggattcctatgaaatgtgtaccttgcaatcgaaagatgtcaaaaggaagtccatt
actggaaaaaagaaatccagtcttacagagttaggtaaaaatgtacaggaaactgaaatc
gccccaaaccagaagactgctgagttatctaatccatttagcaacaataaagcagagatt
ccattgcccgatgaagatggcacagcttctgatttcattaaatcagatacctcagaacag
gagccaaaatacagtaagagttccaaaaaagcatctgatactcatctgaaactttcagaa
agtcttcgttcctctttcagtggagggcccagatcagaaataagagcaatagacaattgt
ggtgacctgcaggactgtgctcagaataacataaaagatgtgggcagccaccaaggcaaa
gtaacacagaaaagcaataatgtctgtattttaaataaggatgttactcagtcactgccc
gagagagaagaccctactgaaacagcagtgggacctgaaactgtctctggaagttcactg
atgagacactgtaatgcaagaagagacagggaaacaactgaagtgatagatgatgccaga
agaaggtgcattagttcaataccatcaaagctgtgctctacaagcctcataagatgcgtt
acgcaaagtgagcccccccgtgactctgaacaaacagaagcaaatcttgaattaaatacg
cagtgtaagcccggctccgtcagtgccaaggatatttttggccacaaattgaattttgct
attcagtctttaaatcataagggtatttccagtaatacaaataaagaatatgcagcttct
tataccagaaaagcatgcatgactgatggtaataagaacaaaactttgcctggtcaggtg
agggaggaaatagccatgcctactgccaccagtaaaagatgttatgaaacactgaatgat
acagaattgccactgccaacttcctcagttattcctcacaagaaaattgttattaaaaga
actagaaggcaaataactgtgccaagacctcagtcctctaagaaactgagcatgtccacg
cagctgggttcgttagaaaagttcaggagatattatgggagagtcgagtctacgctacca
acacccatatcagagcgaagtgaattagatctcacggttcttaattcgcaaactaattgt
gacatttcaaagaatgactgtgtcaatcatggtaacttgagctcttgtgaaattccaccc
gtggaaggtacagattctaatactagccaagcttttggttctttggaaaagactttattt
tgcagtggagaaacatcacaggacaaacaagccctttgtcagagtcctttgacattgtct
gattatgccctgcttagtggaaaaaaaacaagttgtaaaagatctccaggatctttatca
tccaaactgtctagaatgaaaactgaccacaaagaagtagaacaacatggtgaacaattc
caagcagactcaaataggaaagatgaccacacttttgatcttgaatcctcaaataatgat
tttttatatgacacttctcaaacttctaaatcctcagtggaaaaagtgagagaacataat
aacagtgtttctaaggggattgcatgctcgcaatcagatgatgtggtagcagagtctgtg
gagagttctgtcagcccatcaccactcagcagcatagaaggggagtacacagtctcttca
ggcagcattttgtcattgcctgataaaaatgattgtactagcatgatctgtaaagataaa
agtatgttagatgaatcctcatcacaagataaagatgctgaggttccccatgtgacctta
caaagtaacttggaattctctgcagacaacacaagcacaggcaatcccaggagtgatttg
tgttgttctgtctggctgcaagattttgatgcttcttcgggtaagacaatatacatcaat
aaagcaactggactgagcacctatggcactcctcctagtgaaagatttcaagctgcttgt
gtccaagatatcacaacaatggctgtgaatgttgtttcagagaatgggtttcagttcaga
tgccatccctttagaagtgagattgtgttacccttccttcctagacctcaaaatgagaag
actcaggcaagccaggatctgagagatattaaagggaagtctctccagtcattgcttttg
gaatgggataatcctgtttttgttccctgcccagagattgcagttgatgtgaccagtggt
caggccgacagtctggctgtgaaaattcataatatcttgtatccttatcggttcaccaaa
gacatggttcattcaatgcaggttcttcagcaagtggacaataaatttatcgcttgttta
attaacactaggaatgaaatggataaaaaggcagatggaaacctcttaattttggtggac
caacatgcagctcatgaacggatccgcttggagcagcttattgcagattcctatgagaag
gaaacttcagcatgtggcaagaagaaaatattgtcgtcctccatctctccccctttggag
attgaagttacagaagagcaaagaagatttctacgatgctgctacaaaaatttggtggac
ttgggtcttgaattatcatttcctgaggcaaacagctccgtgattcttgtgaggaaagtg
ccaatgtgttttatggaaagagaagccaatgaattacgacggaaaagacaacctatcact
aaaagtattgtggaggagcttattcaagaacaaattgagctagtgcagaccacaggagga
gcagcacgagggaccctgccactgacgtttctgaaggtgttagcttcccaggcctgtcat
ggagctatcaagtttaatgagcatttgactttggaggagagctgtgggcttattgaagct
ttgtcatcttgtaagctgcccttccagtgtgctcatggaagaccttccatgctacctctt
gcagacatagaccatctacagcaggaagaacagcctaaacctaatttgagtagactgcgg
aagatggtgcgagcatggcagctatttggaaaaaaaggaccctattcaaaaaaagttaag
actgtaagctgcaacctctag
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