KEGG   Empidonax traillii (willow flycatcher): 114056133
Entry
114056133         CDS       T05887                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
etl  Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:etl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:etl03036]
    114056133 (KDM4C)
Enzymes [BR:etl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     114056133 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     114056133 (KDM4C)
Chromosome and associated proteins [BR:etl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    114056133 (KDM4C)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 Tudor_5
Other DBs
NCBI-GeneID: 114056133
NCBI-ProteinID: XP_027736863
LinkDB
Position
Unknown
AA seq 1020 aa
MAAVISDSPPNPSCKIMTFRPSMDEFREFNKYLAYMESQGAHRAGIAKVIPPKEWKPRKH
YNDIEDLVIPAPIQQIVTGQSGLFTQYNIQKKPMTVKEFKQLANSNKYRTPRYTDYEDLE
RKYWRNLTFVAPIYGADINGSIYDEGVKEWNIAHLNTILDVVGEECGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFL
RHKITLISPSILKNYGIPFDKITQEAGEFVITFPYGYHAGFNHGYNCAESTNFATIRWID
YGKAAKLCTCRKDMVSISMDIFVRKFQPDRYQLWKKGKDIFTIDHTKPTPGSTPEIKAWL
QRRKKMQNFPKSFQHPRSRSRKLKTPEDKRVSAMMTTGFKVSEEPEKKGRVINRVPSGEE
ENSCRMQLNQHLLDRVKVAGNLTSDSILSPVPVTKKTKMDNEDILCHKAEGQTSEAENPD
KEESVSTEDDISNLESCGSSLEHGEVPVVKNDEEDGMETSSSEEAARKKISKSWRHPLNK
PPARSPMTLVKQQATSDEELPETTLTEEKVLETEAWARPLVYLWQTRVPNFNAEKEYNAA
CAKKEPHCAICTLLMPYYKPDNHDEEGPTFREANSAETLKAENEKTKPLIPEMCFIYSEE
NTENYPSNAFIEEDGTSLLISCVKCCVRVHASCYGVPSQEIHNGWLCSRCRKKAWTAECC
LCNLRGGALKQTTDKKWAHVICAVAIPEVRFGNVTERTPIDTSRIPLQRLKLKCNLCRQR
VKKISGACIQCSYGRCPASFHVTCAHAAGVLMRPDDWPFVVYMTCFRHKSNRNVRAKASE
KTITVGQTVITKHRNTRYYSCRVIGVTSQLFYEIMFDDGSFSLDTFPEDIVSRDCLRLGP
PAEGEVVQVKWPDGKLYSAKYLGTNIVYMYQVEFEDGSQIVVKREEIYTLEEELPKRVKA
RFSTASDMRFEDTFNGSDIILGEKKRQRVLSSRFKNEYVDDPGYRTFLKSSFQKKCQKGL
NT seq 3063 nt   +upstreamnt  +downstreamnt
atggctgctgtcatctcagatagtcctccgaacccaagctgcaaaatcatgacttttagg
ccttcaatggatgaattcagggaattcaacaaatacttagcatacatggaatcacagggt
gctcatagggctggaattgcaaaggttatcccaccgaaggagtggaagccaagaaaacat
tataatgatattgaagatttggtgattcctgctccaattcaacagatagtcactgggcag
tcggggcttttcacacagtacaacattcagaaaaagcccatgacagtgaaggagttcaag
cagctggccaacagtaacaaataccgcaccccaagatacacagattacgaagatttggag
cgtaaatattggaggaacttgacttttgtggcaccaatttatggagcagatatcaatggg
agcatttatgatgaaggtgttaaggaatggaatattgcccatcttaacacaatattggat
gttgtaggagaagagtgtggaatttctatcgagggtgtaaatacaccatatctgtatttt
gggatgtggaaaacgacatttgcgtggcacactgaagacatggatctctacagtattaat
tatctccatttcggggagccaaagtcatggtatgctattcctccagagcatggaaaacgg
cttgaaagactggctcaagggttcttcccaagcagctctcaaggatgtgatgcttttctt
cgccacaagataactctgatttctccatcaatattgaaaaattatggaattccttttgac
aagataacgcaagaggcaggagaatttgtgatcactttcccatatggatatcatgcggga
tttaaccatggatataactgtgcggagtcaacaaactttgccaccattcgatggattgat
tatggaaaagcagcaaaattgtgcacttgtaggaaagacatggtgtcaatatccatggat
atctttgtgaggaagtttcaaccagacaggtaccagctgtggaaaaaaggcaaggatata
tttaccattgatcatacaaaaccaactcctggatcaacacctgaaataaaggcctggcta
cagagaagaaagaaaatgcaaaactttcccaagagcttccagcaccccagatctcgatct
agaaagcttaaaactccagaggacaagagagtatctgctatgatgactactggcttcaag
gtcagtgaagaacctgaaaaaaaagggagagtaataaacagagtgccttctggggaagaa
gaaaacagttgcagaatgcagctgaatcaacatttgttggatcgtgttaaggttgcagga
aacctcacttcagactcaatcttgagccctgttcctgtaacaaagaaaacaaaaatggac
aatgaggacattctatgccataaagcagagggacaaacttctgaagcagaaaatccggat
aaagaggaaagtgtctcgacagaggatgatatcagcaacctagaaagctgtggaagtagt
ttggaacatggagaagtgcccgttgtaaaaaacgatgaagaagatggcatggaaacatct
agttcagaggaagctgcaagaaagaaaatatctaagagttggcgtcatccactaaataaa
cccccagctagatctcccatgactttggttaaacagcaagcaactagtgatgaagaactg
cctgagactaccttaactgaagagaaagttctagagacagaggcatgggccaggcctctg
gtgtacctgtggcagacaagagtacccaatttcaatgctgaaaaagaatacaatgcagct
tgtgcaaaaaaagaacctcattgtgccatttgtactcttctcatgccgtactataagcca
gacaatcatgatgaagaaggtcctactttcagggaagcaaactcagcagaaacattgaag
gcagaaaatgaaaagactaaacctcttattccagagatgtgttttatttatagtgaagaa
aacactgaaaactatccatcaaatgcctttattgaagaagatggaacaagtcttctgatt
tcctgtgtaaaatgttgtgtacgggttcatgcaagttgctatggtgttccttctcaagaa
attcataatggatggttgtgttctcgatgcagaaaaaaagcctggacagctgaatgttgt
ctctgcaatttgagaggtggtgcattaaagcaaactactgacaaaaagtgggcacatgta
atatgtgcagttgccatcccagaagtcagatttggtaatgtcacagagcgtactccgata
gacactagcagaatacctttgcaaaggttaaaattgaaatgtaacttgtgcagacagaga
gttaagaaaatctctggtgcctgcattcagtgttcatatggacgctgcccggcatccttc
catgttacctgtgcccatgctgcaggagtgctgatgcgacccgatgactggccatttgtt
gtctacatgacgtgtttcaggcacaaaagcaaccgcaacgtgagagctaaagcatctgag
aagaccattacagttgggcagacagtcatcacgaaacatagaaatacccgatactatagt
tgcagagtcataggagtgacatctcagcttttctatgaaatcatgtttgatgatggctct
ttcagtctggatacttttcctgaagacattgtaagcagagattgcctgaggctgggtcca
cctgcagagggagaggttgtccaagtgaaatggcctgatggaaaactgtacagtgcaaag
tatctgggaacaaacatagtttatatgtatcaggttgagtttgaagatggttctcaaata
gtagtgaagagagaagaaatatatacactagaagaagagcttcctaagagagtaaaagcg
cgtttttctacagcctctgacatgagatttgaagacacatttaatggatcagatattatc
ttgggagagaagaagaggcagagagtattgagttctcgctttaagaatgaatacgtggat
gatccgggataccgcacattcttgaaaagctcattccagaagaaatgccagaaggggcta
taa

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