Empidonax traillii (willow flycatcher): 114056338
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Entry
114056338 CDS
T05887
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
114056338 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114056338 (DMXL1)
Membrane trafficking [BR:
etl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114056338 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
114056338 (DMXL1)
RAVE complex
114056338 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
Beta-prop_EML
Beta-prop_HPS5
MIOS_WD40
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
114056338
NCBI-ProteinID:
XP_027737268
LinkDB
All DBs
Position
Unknown
AA seq
3061 aa
AA seq
DB search
MNLHQVLTGAVNPGDSCFSVGSLRDQPFTAYASGCDIVVLGTDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGKVICIFEPVNLLKQSSSHHNVLHYQWQKSAQITLETIVHNLTW
DPTGTRLLTGSSCLQLWSNVPLENPSDNDSTERTHIGLGEWRCIWQCKTASQVCLMKFSP
DGEFFATAGKDDCLVKVWYNTESWRSAITPPGINPENQAKEIDFSFVYLAHPRSVNAFSW
RKTSKFMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLLYGGGYSNWSEAVNFSNNFKRN
ISSKEKVQSALELNLRHFRRGRRRSGAVVAHTGYALHQQDPHEVHRNIPPHANALCHFHI
AASINPATDIPLLPSITSLSLGENEEKSGPFVVHWLNNKELHFTLSMEVFLQQLKRSFEH
HSPETNTEESNQMDGRSEEEADENGDEQKGNQEKKELSDEKTTPDSSLVPLSSAIIDHEI
EVLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDA
NSLCRSVVMYACTKNVDLAIQQGKQKPPGLTRSSSMLFSSGHSKSTNSLKLSIFTPNVMM
ISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHN
ALISPDVENAVQANDSLKSQESPVRLQSRANADMTSQDPNAVYSELILWRVDPVGPLSFS
GGVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQHLKLYQAVIDA
TKLLCELSNPEISKYVGEVFNIISQQSTARPGCIIELDAITELHGRKTQLFHVFQEDFIL
NNQEKEMPAKKNNLSDSGNQQNGFSEKFYLIVIEYTQSRSLLHMWHLHLKSVPVSIDEKI
GSNPPEEATQTEEIFSSPDPEKIQSPFTQKYRACKANLQSTSRLTLSSRMVYSQELSMPE
GVEIISVKPSAGHLSSSSIYPVCRAPYLLATSCSDGKVRFWRCRVVTESSASSMPEYSTL
GDVKYVWEEWPLLIEDGLPSSSAISVPGRPTEVSCAHTNRLAVAYKQVASKNSHQDFVMH
VSIFECESTGGSSWILEQTLNLDEVGTIFDSSVSIDSNLVAYNQQDTSLSHGGSITLSTK
HLVHLDWMSREDGSHILTVGIGSKLYMFGQLSGKRQEQNGNEIVAISHSGSTKGTTTLSG
FVLLRCVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQSPAKQELVSTDSYS
GSMSCITSVIKQSQSAASGLHPPKRTLTRSMTSLAQKLSGKRSACDLSVEMEDSGLFEAA
HTLSPTLPQYHPYQLLELMDLGKVRRAKAILSHLVKCIAGEVVAINESEPNHDKRLRSLT
ISASGSTARDPKTFSKAETTDYIEIDSVPPLPLYALLAADDDSSYSCSEKTSNQNSQNKK
DTPNDNYENLFQNPVISTDDLVTFDADEESVKPKVIDLSQYNPAYFGPEHAQVLSRHLLH
SSLPGLTRMEQMSLLALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTT
ALPPVHRAQLLRQGLSTSHFAWAFHSVAEEELLSMLPAVQKGDPTWSELRAMGIGWWVRN
IHSLRKCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGNNFTE
DRWRKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLHDIQLALVISRLYESE
FEVSSTYKSVLQKRVLGVFTGKESSGNIHCDPFLRSMAYWILEDYSKALDTLIKHSVEDK
GGEGDGSSTCNPAVFNFYNYLRTHPLLLRRHFGSSYTSSTHICLTVENGLADKINLGERR
LFFTTAYAHLKAGCPMLALEVLSKMPKVVKRSKPFCKSPSLMDTSKDFSPSSPVKEFETK
DQASSIDWSQPVWNGLGSSSDCSSEKHSSSTLSFDWSQPSVVFQDEPLQLQTDSDENDES
EDSSPVMRELRPLKKTEKLYETSSSYTESFSVVDDKNVLSPSEDIISAQLKFRACLKILT
VELRTLSTGYEVDGGKLRYQLYQWLEREVVALQKTCDYNVEVEEIQSGIGVMPEEPTLHE
NTEDAADQQKSMLQREDFQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLL
QESQQEQSVQMPSRPPPEQSSIPLLFACTASAKTVVANPLLHLGNLTHDILHAIINLDSP
PHPDTQNNKIYVMHTLAASLSACIYQCLCDGHSYSSFQANQFTGTVYQTVLLTRRHSLRT
ASLEETVTPNTSPAQWPGMTALIRLLNSAGEEAQPGLTVLLCEILTAVYLSLFIHGLATH
SSDELYRIIAHPLNDKMWSAVFGGGAHTPGKGQQQLKTKTDDGEKQQKRYRVSSKTSPKE
SSRLPALPLVEQEFPSHKERFIPPELSIWDYFIAKPFLPSQSRVEYDSEESQESDEDDED
IDGDICASNSRNQEHSNSNSYSWSLMRLAMVQLVLHNLKIFYPLAGHDLSELPVSSPICH
AVLKTLQRWEQVLLRRLELYGGPPQHYISVHASEDALAAGPALLRHKTLLEPTNTPFRSS
SHVALSVKRLWQYLVKQEEVQETFIRNIFTKKRCLNESLEEHNETMKNSVVEEHIINKIE
TDLGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDIQELDVSAILATQIYTWVDD
DVEIENKGADDFLVIHARDDLVNVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVEYSNK
FNGIRKELARKEMLKKAINNVRRMASHPTLPYYLTGAQDGSVRMFEWGHAQQITCFRSGG
NSRVTRMRFNYQGNKFGIVDADGYISLYQTNWKCCPLTGTSPKPYLTWQCHNKTANDFVF
ISSSSLIATAGLSSDNRNICLWDTLVSPTNSLVHAFVCHDSGATVLAYAPKHQLLISGGR
KGFTCVIDLRQKQQQQLLQSHDSPVKAIAVDPTEEYFVTGSAEGNIKVWSLSTFNLLHTF
INEHARQSLFRNIGTGVMQIETGPANHIFSCGADGTVKMRILPDRFSPLKDVLKNDVKFM
I
NT seq
9186 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgacgggcgccgtgaaccccggcgacagctgcttctccgtg
ggcagcctgcgcgaccagcccttcacggcatatgcatcaggatgtgatattgtggtactg
gggactgactttgaaagattacagataatccctggagcaaaacatggaaacattcaagtg
ggatgtgtggactgctcaatgcaacaggggaagattgcagcttcttacggaaaggtgatt
tgtatctttgaaccagtcaacctcttgaagcagagcagcagtcatcataatgtgctacat
tatcagtggcagaagagtgctcagatcacactggaaaccatagtacataatctaacatgg
gatcccacaggtactcgcctcttgactggttccagttgtcttcaactttggtcaaatgtt
cctttggaaaacccttctgacaatgacagtacggaaaggacacatattggacttggggag
tggagatgtatctggcaatgcaaaactgcttctcaagtttgtttaatgaaattctcacca
gatggggaattttttgctactgctggaaaggatgactgtcttgtgaaagtatggtacaac
acagagagctggcgatcagccataacaccacctggtatcaatcctgaaaaccaagcaaaa
gaaatcgatttttcatttgtttatttggctcatcctcggtcagtgaatgcattttcatgg
aggaagaccagtaaattcatgccacgtggtgctgtctgcaatgtactcctgacttgctgt
aaggataatgtttgtcgtctctgggcagagactttgttacccaatgacagtctcttgtat
ggtggaggatacagcaattggagtgaagctgtgaacttttcaaataacttcaagagaaat
atttcaagcaaagaaaaagtgcaaagtgctttagagttaaacctgaggcacttccgacga
ggaaggaggaggtcaggtgctgttgtagcacatactggatatgctctgcatcagcaagat
ccccatgaagttcacagaaacatccctcctcatgcaaatgccctttgtcacttccatatt
gctgccagcatcaacccagccacagatatccctctactcccttctatcacatccttgagt
cttggtgaaaatgaagaaaaaagtggaccttttgttgtgcactggctaaacaataaagaa
cttcattttaccttatccatggaagtgtttttgcagcaacttaaaaggagttttgaacat
cattctcctgagactaatactgaggaatctaatcaaatggatggcagatcagaagaagaa
gctgatgagaatggggatgaacaaaaaggaaaccaagaaaagaaggaactgagcgatgag
aaaactactccagattcaagccttgttcctttatcttctgctattattgatcatgaaatt
gaagttctgctctctgaatggagtaaaaatgctgacatgctattcagtatacatcctatg
gatggttcactgctggtgtggcatgtggactggctggatgaataccagcctggcatgttt
cgccaggtgcaggtgtcatttgtttcgagaattcctgttgcatttccaacgggtgacgca
aactctctttgcagaagtgtagtgatgtatgcttgtaccaaaaatgttgacttagctatt
caacaaggcaaacaaaagcctcctggccttacaagatcttcatctatgcttttctcttct
ggacacagtaaatcaactaacagtttaaaactaagcatcttcacacctaatgttatgatg
atttccaaacatgcagatgggtcattgaaccagtggctagtgagttttgctgaggaatct
gctttttcaactgtactcagtatttcacataaatcccgatattgtggtcaccgttttcat
cttaatgacttggcttgccactcagtattaccactgctgcttacaacctcacatcacaat
gctctaatttcaccagatgttgagaatgcagtacaggcaaatgattctttaaagtctcag
gagtcaccagtaagacttcagagtagagccaatgcagatatgacatcccaggatcccaat
gcggtttacagtgaacttattctttggagagtagatcctgttggacctttgtccttttct
ggtggagtttctgaacttgcccggatcaattctcttcatgtttcagctttttctaatgtt
gcatggctgcccacacttatacccagctattgccttggtgcatactgtaattctccaagt
gcctgctttgtggctagtgatggacagcatttgaaattatatcaagctgtaatagatgct
acgaaacttttgtgtgagctctccaatccagaaatttctaagtatgttggtgaagttttt
aacatcataagtcagcaatctacggctcgcccagggtgtatcattgaactggatgctatc
acagagcttcatggccggaagacacagttattccatgtttttcaagaagacttcatttta
aataaccaggagaaggaaatgcctgcaaagaagaacaatttatcagactctggaaaccag
cagaatggattctctgaaaaattctacttaatagtaatagaatatactcaaagccgctca
ttactacatatgtggcatttacatttgaagtcagttcctgtctcaatagatgaaaagata
ggttccaatccacctgaagaagcaacacaaacagaagaaatattttcttcacctgatcca
gagaagatccagtcaccttttactcaaaagtatcgggcctgtaaagcaaaccttcagagc
accagccggcttactctgtcttccagaatggtgtatagtcaagagttgagtatgccagaa
ggagtagagataataagcgtgaagccgtcagcaggacatctcagttcttcttccatatat
cccgtttgtcgtgcaccttatctgctggctacttcatgctctgatggaaaagttcgattc
tggagatgcagagttgtgactgaatcatcagcttcttccatgccggaatatagcacactt
ggtgatgttaaatatgtatgggaagaatggccattactgattgaggatggacttcctagc
agtagtgctattagtgttccaggaaggccaactgaagtcagctgtgcacacaccaacaga
ttagcagtagcatacaagcaggtagcatctaaaaatagccatcaagattttgtaatgcat
gttagtatttttgaatgtgaatctacagggggttcttcttggattttagaacagactctt
aatttagatgaggtgggcaccatatttgactctagtgttagtattgacagcaatttagtg
gcatataaccagcaggacacttctctgtctcatggtgggagtattacactcagcaccaag
cacttggtacacttagactggatgtctagggaagatggttcgcatatcctgacagtggga
attggatcaaaactctatatgtttggtcagctctctgggaagaggcaagaacaaaatggt
aatgagattgtagcaatctcccatagtggcagcactaagggtacaacaaccctttctgga
tttgttttgctgcgttgtgttgatttggtttcatctgtagaaggatcacctccttttccc
gtctccttgtcttgggtgcgcgatggcattcttgtagttggaatggattgtgaaatgcat
gtttactcccagtggcaatctcctgccaagcaggaactagttagtacagattcctacagt
ggaagtatgtcatgtataacgagcgtaattaaacaaagccagtcagccgcctcaggtctg
catccaccaaagagaaccttgaccagatctatgaccagccttgcacagaaacttagtggg
aaaaggtctgcctgtgatctctcagtggaaatggaagattctggtctttttgaagcagct
catacattatctccaactttacctcagtaccatccatatcaactgctggaactcatggat
cttggtaaagtacgcagagcaaaagccattctgtcccatttggtgaagtgcattgctgga
gaagttgttgctataaatgaatctgagcctaatcatgataagaggctcagatctctgacc
atcagtgccagtggaagtactgcaagagatcccaaaacgttcagcaaggcggagactaca
gactatattgaaatagattctgttccgccattgcctttgtatgccctgcttgctgcagat
gatgattcatcttattcctgttcagagaagactagtaatcaaaatagtcaaaataaaaaa
gatacacccaatgacaattatgaaaatctctttcaaaatcctgttataagtacagatgat
cttgttacatttgatgcagatgaagagagtgtgaaaccgaaagtcattgatctttctcag
tataacccagcttactttggaccagaacatgctcaagttctttctcgtcacttgcttcat
tcaagcttgccaggtctgactaggatggagcaaatgtcgttgcttgccttggcagataca
attgctactaccagtactgacattggagaaagcagagacagaagtcaaggtggagaaact
cttgatgagtgtggtttaaagtttttattggctgttcggcttcacacatttctgacaact
gcacttcctcctgtacatcgagctcagctacttcgtcaagggttatctactagtcacttt
gcctgggcgtttcattcagtagcggaagaagaactgctgagtatgctccctgcagtgcag
aagggagatccaacatggtcagagctcagagctatggggataggatggtgggttcgaaat
atccacagcctgcgaaaatgcatagaaaaggtggctaaagcagcctttcagcgaaacaat
gacccacttgatgcagccattttttaccttgcaatgaagaagaaggctgttatctgggga
ttatacaggtcccaaaaagatactaaaatgacacagttttttggaaacaactttactgag
gacagatggcgtaaagcagcattaaaaaatgctttttctctgcttggcaaacagcgtttt
gaacattctgcagcatttttcttgttagcaggacacttaaaagatgcagtggaggtctgc
cttgaaaaactgcacgacattcaattggctcttgtaatatcaagactttacgaatcggag
tttgaagtctctagtacttacaaatctgtactacagaaaagagttttgggtgtgtttact
ggaaaagagagctcaggaaacatacactgtgacccttttctgcgaagtatggcatactgg
attttggaagattatagcaaggctcttgacactttgataaaacattctgttgaagataaa
ggaggtgaaggagatggttcatcaacttgtaaccctgcagtgtttaacttctataactac
ttaagaacacatccacttttgttgagacgtcattttggctcttcttatacatcttccaca
cacatttgcttaacagtagaaaatggattagctgacaaaatcaatctaggtgaaagacga
ctgttctttaccactgcatatgctcatttgaaagctggttgtcctatgttggccttagaa
gtgttatcaaagatgcccaaagttgtcaagaggtcaaagccattctgtaaatcccctagt
ttaatggataccagtaaagatttctcaccatcttctccagttaaagagtttgaaacaaaa
gaccaagcttccagtattgattggtcgcaaccagtatggaatggtctaggttcatcttca
gattgttcatcagaaaagcattcaagttcaactctttcctttgactggagtcagccaagt
gtggtgttccaagatgagcccttgcaactacagacagacagtgatgaaaatgatgagagt
gaagattcttccccagtcatgagagagctaagacctctgaagaaaactgaaaaattatat
gaaacaagttctagctacacggaatcttttagtgtagttgatgacaaaaatgttctcagt
ccatcagaagatatcatttcagcacagctgaagtttagagcatgcctgaaaattcttact
gtagagcttcgtacactgtccactggttatgaggtagatggtgggaagttgcggtatcag
ctttatcagtggcttgagagagaagtggtagctcttcagaagacctgtgattataatgtt
gaagtagaagagatacagtcaggaattggagtgatgccagaggaacctacattacatgaa
aacactgaagacgcagctgaccagcaaaaaagtatgctacagagagaagactttcagaag
agacgtcagtggcttctgaagtaccagtccctgctaagaatgtttcttagttactgtata
cttcatggctcacatggtggaggcttggcatctgtcagaatggaattaattctgctattg
caagaatctcagcaggagcagtcagtacagatgccttccaggcctccaccagagcaaagt
tccatacctctcctgtttgcttgcacagctagtgccaaaacagtggtggctaacccattg
ctacatcttggtaatttaactcatgatatattacatgccataataaaccttgattcgcca
cctcatccagatactcagaacaacaagatatatgtcatgcacaccttagcagcgtcactc
tccgcttgcatctaccaatgtctttgtgatggccacagctacagctcatttcaagcaaat
cagttcactggaacagtgtatcagacagtgctgttaactcggcgccactctttaagaaca
gcaagcttagaagaaacagtgactcccaatacatcacctgctcagtggccaggaatgaca
gctctaatacgcctcctgaattctgctggtgaggaagcccagccaggtctcacagtttta
ctttgtgaaattttaactgcggtctatctaagtctgttcatccatggccttgcaacacat
tctagcgatgagttgtatagaattatagctcatccacttaatgacaaaatgtggtctgct
gtctttggaggaggagctcatacacccggcaaaggacaacagcaattaaagacaaaaact
gatgatggtgagaaacagcaaaaacgttacagggtttcatcaaaaacctctccaaaagag
agttctcggttgcctgcattgccattggtggagcaagaatttccatctcacaaagaaaga
tttatccctcctgagcttagcatctgggattatttcattgcaaagccatttcttccatca
caaagtagagtggaatatgattcagaagagagtcaggaaagtgatgaagatgatgaagat
attgatggagatatatgtgcatcaaattcacgtaatcaagagcattctaattcaaattct
tacagttggtcactgatgagattggcaatggttcagctggtacttcacaatttgaagatt
ttctaccctttggctggacatgatctttcagagcttccagttagctccccaatatgccat
gcagttttaaagactttgcagcgctgggaacaagttcttctccgacgtcttgagctctat
gggggtccacctcaacattatatttcagttcatgcttctgaagatgccctagctgctggt
cctgcattgcttcgccataaaactttacttgagcctacaaacactcctttcagatctagc
agtcatgttgcactgtctgtgaagaggctctggcagtacttggttaaacaggaagaagtc
caggaaacctttatcagaaatatttttacaaagaagcgatgcctaaatgagtcattagag
gagcacaatgaaaccatgaaaaattctgtggtggaagagcacatcatcaataagatagaa
acagatctgggatacccaggaggcaaggcaagaataattcataaagagtctgacatcatt
actgcttttgcagtcaataaggcaaatcggaactgcattgcaatagcatcaagtcatgat
attcaagagttagacgtttctgcgattctagctacacaaatctatacctgggttgatgat
gatgtggaaatagaaaataaaggggctgatgatttcttagttatacatgctcgtgatgat
ctggtaaacgttcagggaactactccttatactcatagtaatcctggcacacctatcaat
atgccttggcttggtagtacacaaactggcaggggtgcatctgtggaatattccaataaa
tttaatggaatcagaaaggaattggcaagaaaagagatgctcaagaaagctattaataat
gtcagaagaatggcttctcacccaacactaccatactacctaacaggtgctcaagatggt
agtgtaagaatgtttgaatggggtcatgcccagcaaatcacatgttttcgatctggtggc
aactcaagggtaactcgcatgagattcaattaccaaggaaataagtttggaattgttgat
gctgatggatatataagtttatatcagacaaactggaaatgttgcccacttactggaact
tcacctaagccatatttgacgtggcaatgtcataacaaaacagccaatgactttgttttc
atcagttcatcatctttgatagctacagcaggattgtcttctgacaacagaaatatttgt
ctttgggataccttggtttcacccacaaatagcttggtgcatgcttttgtctgtcatgat
agtggagcaactgtgctggcatatgctccaaaacatcaactgttaatatctggaggcaga
aaaggctttacatgtgtaattgatcttcgccaaaaacagcagcaacaattacttcagagt
catgattctccagtcaaagcaattgctgttgatcctacagaagagtattttgtcacagga
tctgctgaaggcaacataaaggtgtggagtctgtctacatttaatcttcttcacaccttc
ataaatgagcatgctcgacagtctctcttcagaaacattgggacgggagtcatgcaaatt
gagacaggaccagcaaatcacatattctcctgtggtgctgatggaacagtaaagatgaga
atcttgcctgatagattcagccctttaaaggatgtgttaaaaaatgatgtgaaatttatg
atctaa
DBGET
integrated database retrieval system
