Empidonax traillii (willow flycatcher): 114056375
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Entry
114056375 CDS
T05887
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114056375 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
etl04990
]
114056375 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
etl04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
114056375 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
114056375
NCBI-ProteinID:
XP_027737347
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MVDSLIVSLRLLSSLAVLGFQFVIPQPSTEHRKVPQRTEEQGDASEDSSAGIPGMWGNWG
PWSACSRSCSGGVMEQTRPCLPAYYRERERDRGYRRPGWQFPASDRTHHNPHQEDSLSAY
PGHVISAIRTSVPLHRNEEQLWAGLRAPVPAGGRNSSHGGRGTLRGSRHSQNQQHSQNHR
HSAQAEKRSRNRNPIGPGKYGYGKVPYILPLQTDTGQQPQKLRRQRQSSRSHVFHASPNL
MSTYSQAAAPPVQHGNLYQEASGPQAGHQVLGPSVYQSPSFPVSQSLFHSSDPNQHNPGS
AQTLQEQPQPPRATAIVCVGTYKQYKLCNTIMCPESSRNIREVQCASYNNKPFMGRFYEW
EPFAEVKGSQKCELNCRAIGYRFYVRQAEKVIDGTPCDQNGTSICVAGQCKSIGCDDYLG
SDKVIDKCGICGGDNTACKVVSGVFKHTLTNLGYHKIVEIPEGATKINITEMSKSNNYLA
LRSRSGRSIINGNWAIDRPGRYEGGGTMFTYRRPNEISSTAGESFLADGPTNEVLDVYMI
HQQPNPGIHYEYIIPGDNVISPQLLAHRRPGEPLNGQLGMPESTSREEEDLHRETDILTG
QSAGTFPVIQPGRFPSHQPENQVPAMQPPRQNQEHNWKQVGKTECTTTCGKGSQYPVFHC
VNRITHEEVPEGYCDSSTKPIPEEEACNLFPCPAFWDIGEWSECSKTCGLGMQHRQILCR
QIYANRTLTVQQYRCHQLEKPETTSTCQLKICSEWQIRTEWTSCSVPCGVGQRTRDVKCV
SNLGDVVDDEECNMKLRPNDIENCDMGPCAKSWFLTEWSDRCSAECGAGIRTRSVVCMTN
HVSSLPLEGCGNNRPSETTPCNNGPCAGKVEWFAGGWTQCSSECGSGTQQREVICVRKTE
GNFDVLDPYECSYLEKPPIQQSCYLKPCGSKWFHTEWSTCSKSCEGGFRVREVRCLSDDM
AASSQCDPQLKPEEKESCNTQDCVPEIDENCKDKYYNCNVVVQARLCVYTYYKTACCASC
TRVANRQSGFLGRR
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagtttaatagtttctttgagacttctcagttccctagcagtgttgggattt
cagtttgtgatcccacagccttcaactgaacacagaaaggttccccagaggacagaagag
caaggagatgcatctgaggacagcagtgcaggaatcccaggcatgtggggcaactggggc
ccctggtctgcctgctcccggagctgcagtggaggtgtgatggagcagacacggccctgt
ctccctgcctattaccgggaaagggagcgggatcgggggtaccggcgcccggggtggcag
ttcccagcctcggacaggactcaccacaacccccaccaggaggactcgctctctgcctat
cccggccatgtaatttctgccatccggacatctgtgccactccacaggaacgaggagcag
ctttgggctgggcttcgtgcccctgtccctgctgggggccgtaacagcagccatgggggc
agggggacactaaggggcagccggcactcccagaaccagcagcattcccagaaccaccgg
cacagcgcccaggcagaaaagagaagcagaaacagaaatcctattggtccaggaaaatat
ggatatggaaaagtgccatacattttacctttacaaactgatactggtcagcagcctcag
aaactccggaggcagcgccagtcctcgaggagccacgtgttccatgcgagcccgaacctc
atgagcacctacagccaggcagctgcacctcctgtccaacatggcaatctctatcaagaa
gcaagtgggcctcaggcaggacatcaggtcctggggccctcagtttatcagtccccgtca
tttcctgtgtctcaaagcctgttccatagcagtgacccaaaccagcacaaccctgggtca
gcccaaaccctgcaggagcagccccagccgccaagggccacggccatcgtgtgcgttggc
acctacaagcaatataaactctgcaacacaattatgtgtcctgaaagcagcagaaatatt
agagaggtgcaatgtgcatcatacaataacaagccatttatgggtcgattttatgaatgg
gaaccttttgcagaagtgaagggaagccagaagtgtgagctgaactgccgtgccattggg
taccgcttctacgtgaggcaggctgagaaggtgatagatgggaccccctgtgaccagaac
ggtacctccatctgcgtggcagggcagtgcaagagcattggctgtgacgactatctgggt
tctgacaaggtgattgacaagtgtggaatatgtggaggggacaacactgcttgcaaggtg
gtgtctggagttttcaaacacacgctaacaaatcttggctaccacaagatagtggaaatt
cctgaaggagctaccaaaatcaacattactgagatgtcaaagagcaacaactatttggcc
ctgcggagccgctcaggacggtccatcatcaatggaaactgggcaatcgatcgtcccggg
agatacgaaggtggtgggacaatgttcacttacaggcgcccaaacgaaatctccagcact
gcaggggagtcatttttagctgatggcccaacaaatgaagtccttgatgtctatatgata
catcagcagcctaacccaggcatacattacgagtatatcattccaggagacaatgtcatt
agtcctcagctgcttgctcacaggaggccaggggagccgttgaatggtcagttgggaatg
ccagaaagtacaagtcgtgaggaggaggatttgcacagagagacagacattctcactgga
cagtcagctggaacttttccagttattcagccaggaagatttccttctcatcagccagaa
aaccaggtgcctgctatgcaaccgccaagacaaaaccaggaacacaactggaaacaggtt
ggaaaaactgagtgcacaactacctgtgggaaaggatcacagtacccagttttccactgt
gtcaacagaatcactcacgaggaggtccccgagggttactgtgacagcagtaccaaaccc
atcccagaagaggaggcctgcaacctcttcccatgtccagctttctgggacataggggag
tggtctgagtgcagcaaaacctgtggcctggggatgcagcaccgccagatcttgtgccgg
caaatctacgccaaccgcaccctgacggtccagcagtaccggtgccatcagctggagaaa
cctgagaccaccagcacctgccagctgaagatctgcagtgaatggcagatcaggacagag
tggacctcatgttcagtgccttgtggagtggggcagaggactcgggatgtgaagtgtgtc
agcaaccttggggacgttgtcgatgacgaggaatgtaacatgaagctgcggccaaatgac
attgagaactgtgacatgggcccctgtgccaagagctggttcctcacagagtggagtgac
aggtgctctgcagaatgcggggccgggatccgcacacgctccgtggtctgtatgacaaac
catgtcagcagtttgcctctggaaggctgtggcaacaacagaccctcggaaacaaccccc
tgcaataatggaccctgtgctggcaaagtggagtggttcgctgggggctggacacagtgc
tcttctgaatgtggcagtggaactcaacagagagaagtcatttgtgttaggaaaactgaa
ggtaattttgatgttttggacccctatgaatgttcatatttggaaaaacctcccatccag
caatcctgctacctcaaaccgtgtggatctaagtggtttcatacagaatggagcacatgt
tccaaatcctgtgaaggaggatttcgggtccgggaggtgcgctgtctctccgatgacatg
gcagccagttctcagtgtgatccacagctgaaacctgaagagaaagaatcatgtaacaca
caagattgtgtccctgaaatagatgagaactgtaaagataaatactacaactgcaatgtg
gtggttcaagccaggctctgtgtctacacctactacaaaacagcctgttgtgcatcctgc
acacgtgtggcgaacagacagtcggggttcctgggccggagataa
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