Empidonax traillii (willow flycatcher): 114056433
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Entry
114056433 CDS
T05887
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114056433 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etl03021
]
114056433 (TAF4)
03036 Chromosome and associated proteins [BR:
etl03036
]
114056433 (TAF4)
Transcription machinery [BR:
etl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114056433 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
114056433 (TAF4)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
114056433 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
114056433
NCBI-ProteinID:
XP_027737437
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSGSSSSSSPSPSPGGVVVGGNANAQTESGSGSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTGSAAFSGTPVTANPAPAPAVAPLVNNGPGSVGKGNTVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPPPSVGTGAPTVTLVRPPIHTAGPTVAAAGAAT
QNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSAVPAAPATQVIKSESPKT
IVQAVSQQQTLATGGQPSTTGGNMIIGQTIQAGLSNVAPNPGGIPPAAPGTPTGMAKGTA
NTVAQTLPRTPTPTTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQTLAQMQAQAHAQSQPQNTLTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEPEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSAAAVLLSSS
VQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQTTPLVIQQSQKAGALIRPPQVTLT
QTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQVAAAQKNKLKE
PGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRI
LEIGKKHGITEIHPDVVSYVSHATQQRIQNLVEKLSETAQQRNISYKDDERYEQASDVRA
QLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRD
LIFCLENERETSHSLLLYKAFLK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcggcagcagtagcagcagcagcccaagccccagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcggcagcggcagcaagatgggactgagtgcccca
gagatcacaaaagcaggagcaggaggagtacaggggggtgttattaatcataacaccagg
tcccagacttcagctctggatggagccaccacaactagcaccagcaccaccactgcagca
gcaggaggatctgaagtcactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcaccatggcaactgccttgtccaccaggaatggcaagattgggaccacaacagtg
cagactttgaatgggagtaacgtggtgatgaactctcaccacacaggaagtgctgctttc
tctgggactcctgtgaccgccaaccccgctcccgcacctgctgttgcccctctcgttaac
aatggacctggatccgtggggaagggaaacactgttaatgctgttttgccctcagcttcc
aacactgtcatccagacttctttccttaacactgctgtgtcctctgcatcttcctcctcg
cccacagttatctcctcacagccaccgccgagcgtcgggaccggggcgcccacggtgacg
ctcgtgaggcccccgatccacacagcaggacccacggtagctgcagctggtgcagccact
cagaatgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgtt
gccacagccactgtgggatctggagtttccctccagacatcgctggtgaacagccagtct
ggttccgctgtgccagcagctcctgccacacaggtcatcaaatctgagtctcctaaaact
atagtccaggcagtgtcccaacagcagacgctggctactggtggccagcccagtactaca
gggggtaacatgattattgggcaaactatacaagctgggctctccaatgttgctcccaat
cctggtgggatacctcctgcggctcctggcacccccacaggaatggctaaaggcactgcc
aacacggtggcacaaactctgccgaggactccaacaccaactaccagtggaatcagagca
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccgactaac
attcagaactttcagttaccaccaggcatggtccttgtgcgcagtgagaacgggcagttg
ctgatgatcccccaacaaaccttggcacagatgcaagcacaggcacatgcccagtctcag
cctcagaatactctgactcctcgtcctgctacgccgaccagtgcacccccagtgcagata
tcgacagtgcaggctccaggaacacccattattgcacgacaggtgacaccaactactatt
atcaagcaagtgtctcaggctcaaacaacagtgcaacccacgacaacgctacagcgtccc
ccggttgtgcaacctcagattgttctgggtggtactgcccaaacaaccacgttggggaca
gcaacagctgtacaaactggaactcctcagagaacagtgcaaggaacaacggccacctcc
actgctgccacagaaactatggaaaatgtgaagaaatgcaaaaactttctgtccacatta
ataaaactggcatcgtctggaaaacagtcttcagagactgcggccaacgtgaaagaatta
gtacagaacctgctggatggtaaaattgaaccagaagactttaccagtaggctgtacaga
gaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgcc
ttgagacagttaacaccagactctgcagctttcattcagcagagccagcagcagcagccg
acgacgcaggcgacgatagccacgatcccgtcggcggcggccgtgctgctcagctcctcg
gtacagcgcacggcggggaaggcgactgccactgtcacaagcaccctccagcaacctgtc
atcagcctcactcagcccacacaagttggtgttagtaaacaaggccagaccacgccactg
gttatccaacagtctcagaaagcaggggcgttgataaggcccccccaggtgacattgaca
cagacacccatggtagcattgcggcagccacacagtcgtattatgctcacaactcctcaa
attcaactgaatcaacttcagacagtacctgtggtaaaaccagcagtattacctggaaac
aaagctattgctactgtttcaacacaagtagctgctgctcagaagaataaactgaaagaa
cctgggggaggctcttttagggatgatgatgacattaatgatgttgcatcaatggctgga
gtcaacctgtcagaagaaagtgctcggatattggcaacgaactctgagttggtgggcaca
ttaacaaggtcctgtaaagatgaaacctttcttttcccagcacctttacaaagaaggata
ttagaaataggtaaaaaacatggaataacagaaatccatcctgatgtagttagctacgtg
tcgcacgccacacaacaaagaatacaaaacctcgtggagaagttatcagagactgctcaa
caaaggaatatttcttacaaggatgatgaaagatacgagcaagcaagtgacgttcgggca
cagctgaagttctttgaacagcttgatcaaatagaaaagcagcgcaaagatgaacaagaa
agggaaattttaatgcgcgcagcaaagtctcgatctcgacaagaagatccagaacagctt
cggttgaaacagaaggccaaggagatgcagcagcaggagctcgcccagatgagacagagg
gacgccaacctgactgcgttagctgccatcggccccaggaagaagaggaaagtggactca
ccgggatctggatcagggacagagggatctggttcaagcgcagcagtcccaggcagctct
ggagttggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggac
ctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaagca
ttccttaagtaa
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integrated database retrieval system
