Empidonax traillii (willow flycatcher): 114056616
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Entry
114056616 CDS
T05887
Symbol
MSI1
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114056616 (MSI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114056616 (MSI1)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114056616 (MSI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
114056616
NCBI-ProteinID:
XP_027737742
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MRRAAGGPAGVGGAGQVVPAGPSSLAPSPPGGEGSGEGAAWPVRPAPFPALICPGSAAPL
LAGRRGPNGDRRQPARPRLPGLPARPLQNVHRGTELADHARGLAGVLQPVRRGEGVPGDA
GPADKEIQVRGRARASLRPRRGPAATLTNFLSSLRIPFPARAAGLRGFGFVTFMDQAGVD
KVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV
DDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGS
ARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASRSYTGIAPGYTYQFPEFRVERTPLPS
APVLPELTAIPLTAYGPMAAAAAAAAVVRGTGSTPSRTGGFLGTTSPGPMAELYGAANQD
SGVSSYISAASPAPSTGFGHSLGGPLIATAFTNGYH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagggcggccggcgggccggcgggggtgggaggagccgggcaggttgtgcccgcc
gggccctcctccctcgctccctccccgcccggcggagaggggtcgggggagggggcagca
tggcctgtccgtccggccccttttccagcgctcatctgccccgggagtgcggcgccgctc
ctcgcagggagaagaggtccgaatggagacagacggcagccagcccggcctcgcctcccc
ggactccccgcacgacccctgcaaaatgttcatcgggggactgagctggcagaccacgca
agagggcttgcgggagtacttcagccagttcggcgaggtgaaggagtgcctggtgatgcg
ggacccgctgacaaagagatccaggtgagaggccgggcccgcgcctcccttcgcccccgc
cgcggcccggccgccactttaaccaactttctctcttctctccgcatcccctttcctgcc
cgggctgcgggcctcaggggcttcgggttcgtcacgttcatggaccaggctggcgtcgac
aaggtcctggcccaatccagacatgaattggactccaagacgattgacccgaaggtagcg
ttcccccgccgagcacagcccaagatggtgacccgaacgaagaagatatttgtgggtggt
ctgtctgtgaacactactgtggaggatgtgaaacaatattttgagcagttcgggaaggtg
gacgacgcgatgctgatgtttgacaaaacaaccaaccgacaccgagggtttgggttcgtc
acatttgaaagcgaagacattgtggaaaaagtgtgtgaaatccacttccatgagatcaac
aacaagatggtggagtgtaaaaaagctcagccgaaggaggtgatgtccccaacgggctcg
gcacgagggcggtcccgagtcatgccttacgggatggatgccttcatgctggggatcggc
atgctgggttatccaggcttccaagctgccacctacgcgagtcgaagttacactggcatt
gcacctggctacacttaccagtttcctgagttccgtgtagagcggacccctctcccgagt
gcccccgtcctccccgagctcacagcaatccccctcactgcgtatggaccgatggcggca
gcagcggctgcggcggccgtggtgcgagggacaggttccacccccagtcgcaccggtgga
ttcctgggcaccaccagccccgggccaatggcagagctttatggagccgccaaccaggac
tcaggggtcagcagttacatcagcgctgccagtccagccccgagcaccggctttgggcac
agcctagggggtcccttgattgcaacagcttttaccaatgggtatcactga
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