Empidonax traillii (willow flycatcher): 114056646
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Entry
114056646 CDS
T05887
Symbol
DEPDC5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
114056646 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114056646 (DEPDC5)
Membrane trafficking [BR:
etl04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
114056646 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
114056646
NCBI-ProteinID:
XP_027737805
LinkDB
All DBs
Position
Unknown
AA seq
1601 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYEAKSIDEFPEAHRA
SIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPPGYNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRMGDDYNIPHWINHSFYTSKSQLLCNSFT
PRIKLAGRKPLTEKAKNNRDASLGTPKDAENALPIQVDYDGYDAQVFRLPGPSRAQRCTT
FRSVRERESRTRKSSSSYDVSCSPSLQSRALPPEEVRSQASDDSSLGKISNILMIPRPHL
HQCEVSSSLGYTSTRDVLENMLESQQRDSSAPGRFHVGSAESLLHIRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGSGQQDLTHSSAELLE
LAYHEATGRHVSSRQPGDSGSFLSFSGTEEFSNGLAGSNGAGVNLKPQNKDSLEDAVSNS
SDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLPE
ADIDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQPKPQKPAPAVPPPLSSSPLYSRGL
VSRNRAEEEDQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDSE
FVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACISATKRIV
EGEAHCDVYGDRPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGSAMKGLQIAGP
IPTHSLEQPGPPIGKKGTSALSALLQMEASQKTLGEQQAAMLSGKSSGQPSESGSIAITP
TYMDSPRKDGAFFMDFVRSPRTASTFHSQVSIDQSVPAASDGNTLITTGQVPDRGSTQTL
GSAQNVAEPGYSTAGAAEGSSQQCSTSALTSSSTLVEILEAMKHPTTGIQLLSEQKGLSP
YCFISAEVVHWLVNNVEGVQTQAMAIDIMQKMLEEQLIVHASGEALRTFIYGFYFYKIVV
DKEPDRVGMQQPAMWHTAAMDDFSAFQRKWFEVAFVAEELLHSEIPAFFLPWLPSRPASY
ASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAA
FEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPL
NVSCLLKEGSEHLFDGFEPETYWDRMHLLQEAIAHRFGFVQDKYSASAFNFPAENKPQYI
HVTGTVFLQLPYSKRKFSCGQQRRRRNSTSSTNQNMFCEERIGYNWAYNTMLTKTWRSSA
TGDEKFADRLLKDFTDFCWNKDSRLVLFWTDCLDKMHASAP
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaaggtgtacaagctcgtcatacacaagaagggctttggaggcagtgat
gatgaactggtggtgaatcctaaagtattccttcaaatcaagctgggagatgttgtggaa
attgcccatcccaatgatgagtacagtcccctgctcctgcaagtgaagtcactgaaggaa
gatttgcagaaagagacgatcagtgtggatcagacagttgcccaggtgttccgactgcgg
ccgtaccaggatgtccacgtgaacgttgtggaccccaaggaggtgaccttggacttggtg
gagctgacgtttaaggatcagtatatcggccgtggggacatgtggagactgaagaagagc
ttggtcagcacatgtgcatatgtcacccagaaggttgaatttgcaggtatcagggctcag
gcaggggagctgtgggtgaagagtgagaaagtcacctgtggatacatcagtgaggacacc
cgggtggttttccgctccacttctgccatggtttatatttttatccagatgagctgtgaa
atgtgggattttgacatttatggggacctgtactttgagaaggctgtgaatggtttcctc
gctgacctcttcacaaagtggaaggagaagaattgcagccatgaagtgacagtggttcta
ttttctagaacattttatgaggcaaaatctatagatgagttccctgaagcacatcgagca
tccatccggcaggaccatgagggaaggttttatgaggatttttacaaggttgtagttcag
aatgagaggcgagaggaatggacctcactgctcgtgaccatcaaaaagcttttcatccag
taccctgtgctggtacgactggagcaagcagagggctttcctccaggttacaattccacc
tcggcacaagggaactacctggaggccataaatctttcattcaatgtgtttgacaagcat
tacatcaaccgcaacttcgaccgcacggggcagatgtccgtggtgatcacccccggcgtg
ggcgtcttcgaggtcgaccggctcctcatgatcctgaccaagcagaggatgattgacaat
gggattggggtggatctggtgtgcatgggagagcaacccttacatgctgtgccactcttt
aagctccataaccgctgtggccccggggactcccgcatgggtgatgactacaatattcca
cactggataaatcacagtttctacacatccaagagccagctcctgtgcaacagcttcact
ccacggatcaagctggcaggaaggaagccactgactgagaaagcaaaaaataatcgagat
gcctctttaggaactcccaaggatgctgagaatgccctgcctatccaggtggattacgat
ggctatgatgcccaggtgttccggctgccaggcccctccagagcccagcgctgcaccacc
ttcaggtctgtgagggagagggaaagtcggacgaggaagagctcgagctcctatgacgtg
tcgtgcagcccgtccctgcagagccgcgcgctgcccccagaggaggtgaggagccaggcg
tctgacgacagctccctgggcaagatctccaacatcctcatgatcccgcggccacacctg
caccagtgtgaagtcagcagctccctgggctacaccagcaccagagacgtcctggagaac
atgctggagtctcagcagcgggactccagcgccccggggaggttccacgtgggcagtgcc
gaatccctgctgcacatccggccggggggatacaccccccagagggccctcatcaacccc
ttcgccccctcccgcatgcccatgaagctcacgtccaaccggcgccgctggatgcacacc
tttcccgtgggtccgtcgggagaagccatccagatccatcaccaaacccggcagaacatg
gcagaaatgcagggcagtgggcagcaggacctgactcattcctctgctgagctcctggag
ctggcttaccatgaggccacgggcaggcacgtcagctctcggcagccaggggacagcggc
tccttcctgagcttcagcgggacagaggagttctccaacgggctggctgggagcaacggg
gcaggggtgaacctcaaacctcagaacaaggattccttggaggatgctgtctccaactct
tcagatccaattctgacgctgtctgctccccccgtagtgccaggcttctgttgtacagtt
ggagtggactggaaatccctcactactccggcctgtctccccctcaccaccgattacttc
ccggaccgccagagcctgcagaacgattacaccgagggttgctatgacctgctgccagag
gctgacattgacaggagggatgaggaaggagtgcagatgacagcccagcaggtgtttgag
gagtttatttgtcagcgcctcatgcaaggctatcaaattattgtgcaacccaagccacag
aaaccggccccggccgtgccaccccccctgagcagcagtcccctctacagccgaggcctt
gtatccagaaatcgagctgaggaggaagatcagtactggctgagtatgggccgtaccttc
cacaaagtcaccttgaaagacaaaatcatcactgtgactcggtaccttccaaagtatcca
tacgaatctgctcagataaactacacctacagcttgtgcccctcacactctgactctgaa
tttgtctcttgctgggtagaattttcccatgagagactagaagagtacaagtggaattac
ttggatcagtacatctgctctgctggctcagaggatttcagcctgatcgagtcgctgaag
ttctggcggacgcggttcctgctgctgcccgcctgcatcagcgccacgaagcgcatcgtg
gagggcgaggcgcactgcgacgtgtacggggacaggccccgctccgacgaggaggagtgg
cagctcctggacggattcatccgcttcgtggaggggctgaaccgcatccggcgccgccac
cgatccgacaggatgatccggaaaggatctgccatgaaaggcttgcagattgctggtcca
attcccacccactctctggagcagcctggacctcccattgggaagaaaggaacctcagca
ctctcagctctgctgcagatggaagccagtcagaagaccctgggggagcagcaagcagca
atgctttctgggaagagctctgggcagccctcagagagtgggagcattgccatcacaccc
acctatatggacagccctcgcaaggatggggccttctttatggattttgttcgcagccca
cgaacagcttcaaccttccactcccaggtctctatagatcagtcagttcctgcagcctca
gatggcaacacattgataaccacggggcaggtgcctgacaggggcagcacccagaccttg
ggcagtgcccagaacgttgcagagccaggatacagcacagctggagctgcagagggcagc
tctcagcagtgttccacgagtgctctgacttcctcttccactctggtggagattctcgaa
gccatgaaacaccccaccacagggatccagctgctgtcggaacagaaaggcctctccccg
tactgcttcatcagtgcagaagtcgtgcactggctggtcaataatgtggagggtgtgcag
acccaggccatggccattgacataatgcagaaaatgctggaagagcagctgattgtccac
gcgtctggagaagctttacgaacctttatttatggcttttatttttacaagattgtggtg
gacaaagaaccagaccgagtggggatgcagcagcctgccatgtggcacaccgctgccatg
gacgacttctccgccttccagaggaagtggtttgaggtggcctttgtggcagaagagctc
ctgcactccgagatcccggcgttcttcctgccctggctgcccagccgccccgcctcctat
gcaagtaggcacagttcctttagccgcagtttcggaggacggagccaggcagctgcactc
ttagctgccacggtgcccgagcagcggacggtgacgctggacgtggatgtgaacaaccgc
acggaccggctggagtggtgcagttgttattaccatggcaatttctccctgaatgctgcc
tttgaaatcaagctgcactggatggccgtgactgcagccgtgctcttcgagatggttcag
ggttggcaccggaaagccacctcctgcgggttcctgctggtcccagtcttggaaggcccc
ttcgctttgcccagttacttgtacggagaccccctgcgggctcagctcttcatccccctc
aacgtgagctgcctgctgaaggagggcagtgagcatctctttgatggcttcgaaccagaa
acatactgggaccgaatgcacctgctgcaggaggcaatagcacacagatttggatttgtg
caagataaatactcggcctctgcattcaacttcccagcagagaacaagccccagtatatc
catgtcacagggacggtgtttctgcagctgccgtattccaagcggaagttctcctgcggg
cagcagcggcgccggcgcaactccaccagctccaccaaccagaacatgttctgtgaggag
cgaatcggctacaactgggcctacaacaccatgctcaccaaaacctggcgctccagcgcc
accggcgacgagaagttcgccgaccggctgctgaaggacttcactgacttctgctggaac
aaggacagccggctcgttctcttctggactgactgtctggacaagatgcacgccagtgct
ccctga
DBGET
integrated database retrieval system
