Empidonax traillii (willow flycatcher): 114056699 Help Entry 114056699         CDS       T05887                                  Symbol CUX1 Name (RefSeq) protein CASP isoform X1   KO K09313   homeobox protein cut-like Organism etl  Empidonax traillii (willow flycatcher) Brite KEGG Orthology (KO) [BR:etl00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:etl03000]     114056699 (CUX1) Transcription factors [BR:etl03000]  Eukaryotic type   Helix-turn-helix    Homeo domain CUT     114056699 (CUX1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CUT Homeodomain Homeobox_KN Motif Other DBs NCBI-GeneID:  114056699 NCBI-ProteinID:  XP_027737901 LinkDB All DBs Position Unknown AA seq 1526 aa AA seqDB search MLGRAASPLQRELDTTATILANRQDESEQSRKKLIEQSREFKKNTPEDLRKQVAPLLKSF QGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMHDIETENQKLRE TLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQNDFAEKERKLQ ETQMSTASKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERAN QRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLEVELAAKEREIA QLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQADYEEVKKELNI LKSMEFAPSESSGGQDASKPLEVLLLEKNRSLQSENATLRITNSDLSGSARRKGKDQPES QRPATLPASPPSQLLRNAGEQASNTNGTHQFSPTGLSQDFFSSSLASPSLPLASTGKFAL NSLLQRQLMQSFYSKAMQEAGSTSMIFPTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSE SAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLT VRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRRNGSEGNITTRI RTTETGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSILQQARREMEAQ QAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYSPLAISLKKHSSVTDSSISALQN LSGLKKEPQEAPVLELHGISDSAQGMLRHVKNELGRGGVWKDHWWNTVQHERRNAALPED IKVEEASGGKEKVSNQTRPDRSQLQGPSSSEYWKEWPNAESPYSQSSELSMTGASRSETP QNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIF GEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQCVLPAQGQQQGQVL HSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPAIETSKD GKSQESSEPPASESQSSTPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQ RLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEK KAYMKRRHSSVSDSQSCESSSAGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQK PYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQSQAGSSDSPSARS SRAAHSSEGDSCDGVDAEGPPEGKSSGPEADEYSNATAKSQGGPAEPAFEAGEEALRGAR SSEKAEPFQAESLEDTDDEGRLRAPRQSSPPAPQRPGEALETLPNSATEGDASTSAASTS VLTGESSYKSKESSEKTSSVPSTSSTPATGSQKANSLQSLFGFSEAASSRNTRDSSLRKK KAANLNNIIHRLEKAASREEAVEWEF NT seq 4581 nt NT seq  +upstreamnt  +downstreamnt atgctgggcagagccgcatccccgctgcagagagagctcgataccacagcaacaatattg gcgaaccggcaagatgaaagtgagcagtccaggaaaaaacttatcgagcaaagtcgtgag ttcaagaaaaacactccagaggacctgcgcaaacaggtagctccgttactgaagagtttc cagggagagattgacgcactgggcaaacgaagcaaagaagcagaggcagccttcttgaat gtttataagagattaattgatgttccagatccggttccagccttggatttaggacagcag cttcagctgaaggttcaacgcatgcacgatattgaaacagagaaccagaaacttagggaa actctagaggagtacaacaaagaattcgccgaggtgaaaaatcaggaggttacaataaaa gcacttaaagagaaaatccgagaatatgagcagaccctgaagaaccaagcggagaacata gcccttgaaaaggaacaaaagttacaaaatgattttgcagagaaggagagaaaattgcag gagacgcagatgtcgacagcctcgaagctggaggaggccgaacacaaagttcaaactttg caaacagccttggaaaaaaccaggacagaactatttgatctgaaaacaaaatacgatgaa gaaactactgcaaaggctgatgaaatcgagatgatcatgacagaccttgaaagagcaaat cagagggcagaggtggctcagagagaggcagagaccttaagggagcagctctcatcagct aacaaatctctccaacttgctacgcagatccagaaggcacctgatgtggaacaggccatc gaggtgctaacacggtccagcttggaagtagaactggctgcgaaggagcgggagatcgcc cagctcgtggaagatgtccagagactccagggcagcctcaccaagctgagggagaactcc agcagccaaatctcccagctggagcagcagctgacggccaagaacagcacactcaaacaa ctggaagaaaaactgaaaggacaggctgattatgaagaggttaagaaagaattaaatata ttgaaatccatggagtttgcaccatctgaaagctctggtgggcaggatgcttccaaaccg ctggaggtgctgctgctggagaagaaccgctcgctgcagtcggagaacgccacgctgcgc atcaccaacagcgacctgagcgggtcagccaggagaaaagggaaagaccagcctgagagt cagcgtcctgcaaccttgccggcctcccctccttcccagttgctccgcaacgcgggggag caggcttccaatactaatggtacacaccagttctcaccaacgggtttaagtcaagacttt ttcagctcatccctggcgagccccagcttacccctggcctccacaggaaaatttgcacta aactctctcctccagcgacagctaatgcagtccttctactccaaggcaatgcaggaagca ggaagcacaagcatgatttttccaacaggtccatacagcacaaactccatatcttcccaa agtccattacaacaaagcccggatgttaatggcatggccccgtctcccagccagtcagaa agtgctgggagcatctctgaaggcgaggagatagacacggccgaaattgcacgtcaggtg aaagagcagttgatcaagcacaatattggacagcggatatttggacattatgtgttggga ctgtcgcaagggtctgtgagtgagatcctggcccggccaaagccatggaataaactgact gtgagaggcaaggagccatttcataagatgaagcagttcctctcggacgagcagaacatc ttggctcttcgcagcatccagggtagacaaagagagaatccaggccagaacctgaacaga ctatttcaggaagtaccgaaacgaagaaatgggtctgaaggtaatataaccacaagaatc cgaaccacagagactggctcagatgaagccatcaaatccattctcgaacaagccaaaagg gagctgcaagtacagaaaacagctgagccggctcagccgccttctgcctctagcagtggc aattctgatgatgctattcgatccattctgcaacaagcccgacgggaaatggaggcacag caggctgcccttgaacctgccttaaaaacaccacctttatctcaagctgacatttctatc ctgtcccccaaactagtgtctacacctgcaatgtcttcggtttccagctattctcctttg gccatatccctgaagaaacattcatctgtcactgattccagtatctctgcattgcagaac ctctctgggctcaaaaaggagcctcaggaggcacctgttttagagcttcatggaataagt gattccgcccagggtatgttgaggcatgttaaaaatgagttgggacgtggtggtgtttgg aaggaccattggtggaatactgtgcagcatgagagaagaaatgcagctcttcccgaagat ataaaagttgaggaagccagtggtggaaaagaaaaggtcagcaatcagactaggccagat cgtagccagctccaaggaccgtcttcttccgagtattggaaagagtggccaaacgcggaa tctccgtactcccagagttccgaattgagcatgactggggcgagtcgcagtgagacacca caaaatagccccctcccttcatcccctatcgtgtccttgtccaagccatccaaaccttcg gttcctccactgacacccgagcagtatgagatttatatgtaccaggaggtggatacgata gagctaacgcggcaggtcaaggaaaagctagcaaagaatggcatctgccaaaggatcttt ggggaaaaggtattggggctgtcccaaggaagtgtcagtgacatgctctccaggccaaag ccatggagtaaattgacccaaaaaggccgagaaccatttattcgtatgcagctctggttg aatggtgagctgggacagtgtgtcctgcccgcacaagggcagcaacaaggacaagtcctt cactctgtgacatcattacaggattccctacagcagggatgtgcaagctcagaaagtact ccaaagacttctgccagttgcagtcctgctcctgaatctcccatgagttccagtgaatcg gtgaaaagcctgactgaattggtacagcagccctgccccgctatagagacgagtaaggac ggcaaatcccaagaatccagcgagccgcctgcttccgaatcccagtccagcacccctttg ccgctgtcaggccactcggcactgagcatccaggaactggtggccatgtcccccgagctg gacacttatggcatcacaaagagggtcaaggaagtgctaacggacaacaatcttggtcag cgtttgttcggggagacaatcctgggcctgacacaaggctctgtctcagaccttctggct cgcccgaagccctggcacaagctgagtctgaagggacgggaaccctttgtccgcatgcag ctgtggctgaacgatcccaacaacgtggagaagctgatggatatgaaacgaatggagaaa aaagcctacatgaaacggcggcacagctctgtcagcgacagtcagtcctgcgagtcctca tccgctggaatcgactacagccagggggccagcccacagccccagcaccagctcaagaag ccccgggtggtgctggcaccagaggagaaagaagctctgaaacgagcctaccagcaaaag ccatacccatcaccaaaaaccattgaggaactcgctacgcagctcaacttgaaaaccagc accgtgatcaactggttccacaattacaggtctcgcatccgccgggagctgttcattgag gagatccaagccgggagccagagccaggccgggtcgagcgactccccttcggccaggagc agcagggcggctcacagctccgagggggacagctgcgacggcgtggacgcggaaggccct cccgaggggaagtcgagtggcccggaggcggatgagtacagcaatgcaaccgcaaagtct cagggagggcccgccgagccggctttcgaggcgggggaagaggcactgcgaggcgccagg tcttcggagaaagcggagccgttccaggccgagagcctggaggacaccgacgacgagggc cggctcagagcaccgcgccagagctccccgccggcaccgcagcgcccgggagaagctctg gagacactgccaaactctgccacggaaggggatgcctctacctcagctgcctccacctca gtccttacgggggagagctcctacaagtcaaaagaaagttcggagaaaacctccagtgtg ccaagtacgagctcgacgccggccacaggctcgcagaaagccaactctctccagagcttg ttcggcttctcggaggcggcgagctccaggaacacgcgagacagctccttgaggaaaaag aaagcggccaacttgaacaacatcatccaccgcctggagaaggccgcgagtcgggaagag gccgtcgagtgggagttttga

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