Empidonax traillii (willow flycatcher): 114056747
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Entry
114056747 CDS
T05887
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
114056747 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114056747 (RAG1)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114056747 (RAG1)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114056747 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
114056747
NCBI-ProteinID:
XP_027738007
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MDLPEEIQHPYAKFSEWKFKLFKVRSFEKTSDDRQHINKDQAEGIASSNTEIILHKDKAV
SREEKMELMGNRQALEEEAHDMKTRDNRAHQNNLKQLCRICGVSFKTDCYKRTHPVHGPV
DDETLCLLRKKEKKATSWPDLIAKVFKIDVRGDVDTVHPTRFCHNCWSIIHRKYSSTLCE
VYFPRNSTMEWQPHSPNCEVCHTTSRGVKRKSQTPSVQQGKRAKSIVERARLNRGVKNQA
QINNKNLMKEIVNCKNIHLSTKLLAVDYPVDFIKSISCQICEHILADPVETTCRHLFCRT
CILKCIKVMGSYCPSCWYPCFPTDLVTPVKSFLNILDSLGIRCPVKECDEEILHGKYGQH
LSNHKEMKDRELYSYVNKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFAEKEEGGDIKAV
CMTLFLLALRAKNEHRQADELEAIMQGRGSGLHPAVCLAIRVNTFLSCSQYHKMYRTVKA
VSGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLSGLPLSVDDYPV
DTIAKRFRYDAALVCALKDMEEEILEGMKAKNLDDYLNGPFTVVIKESCDGMGDVSEKHG
SGPAVPEKAVRFSFTIMNIAIAHGNESKRIFEEVKPNSELCCKPLCLMLADESDHETLTA
ILSPLIAEREAMKNSELLLEMGGILRTFRFVFRGTGYDEKLVREVEGLEASGSTYICTLC
DATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGVSAKPFIETVPS
IDALHCDIGNATEFYRIFQMEIGELYKNPDVSKEERKRWQLTLDKHLRKKMNLKPMMKMS
GNFARKLMSKEAVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPAKECPELLCQYS
YNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNESGNKLFRR
FRKMNARQSKFYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQSFTIDSEDSFGDSLPLEV
LEKNDSAVL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggatctacctgaagaaattcagcatccatatgcaaaattttctgaatggaaattcaag
ctctttaaagtgcggtcatttgaaaaaacaagtgatgacaggcagcacataaacaaagat
caggcagaagggattgcttcttcaaacacagaaatcatactgcataaagataaagcagtg
tcaagggaagaaaagatggagttaatgggcaataggcaggcacttgaggaagaggcccat
gacatgaaaacacgagacaatagagctcatcagaacaatctgaagcaactttgtcgcatc
tgtggagtttcatttaaaactgattgctacaagagaactcatccagtgcatgggccggtg
gatgatgaaactctgtgtcttctgagaaagaaagaaaaaaaagcaacctcttggccagat
cttatagctaaggtgttcaagattgatgtgcgaggggatgttgatactgtccatcccact
cggttttgtcacaactgttggagtattatccatagaaaatacagtagtactctatgtgag
gtatattttcctaggaacagcaccatggagtggcaacctcactccccaaactgtgaggta
tgccatactaccagccgaggggtcaagagaaaaagccagacaccaagtgtacaacaaggc
aaacgtgcgaaaagcattgtggaacgtgctcgactaaacagaggtgtaaagaaccaggca
cagataaacaacaaaaatttaatgaaagagattgtcaattgcaagaatatacatctcagc
accaagctgcttgctgttgattacccagtagatttcattaaatcaatttcttgccagatt
tgtgagcatattttggcagatccagtggaaacaacatgcagacacttgttttgcagaact
tgcatccttaagtgtatcaaggttatgggcagctattgcccctcctgctggtatccttgc
ttcccgactgatctggtaaccccagtgaaatccttcctgaacatccttgatagcctgggt
ataagatgccctgtaaaggaatgtgatgaagagattttgcatggaaaatatggccaacac
ctctccaaccacaaggagatgaaagatagagagctctatagctacgtaaataaaggtggc
cgaccaaggcagcatctcctatctttgacaaggagagctcagaaacatcgtctgagggaa
ctcaaacgtcaagtcaaggcttttgctgagaaagaagagggtggtgatataaaggctgta
tgcatgactttgttccttctagctttaagagcaaaaaacgaacacagacaagcagatgaa
ttggaggctataatgcaagggaggggatctggacttcatcctgctgtctgtctggcaatc
cgagttaatacgtttctcagctgtagccagtaccataaaatgtatagaactgtaaaagct
gtcagtgggaggcagatcttccagcccttgcatgctcttcgcactgctgagaaagccctc
ctaccaggttaccacccatttgagtggaaacctcccttgaaaaacgtatccactaatacc
gaagtaggaattatagatggtctatcaggattgccactttcagttgatgactacccagta
gacacaattgcaaagagatttcgatatgatgcagccttggtttgtgccttaaaggacatg
gaggaggagatcttggaaggcatgaaagcaaaaaatctggacgactatttgaatggcccc
ttcactgtggtaataaaagagtcctgtgatggaatgggagatgtcagtgagaagcatgga
agtgggcctgctgtcccagagaaggctgttcgcttttctttcacaattatgaacattgct
atagcacatgggaatgaaagcaagaggatctttgaggaagtaaagccaaattcagagttg
tgttgcaagcccttgtgccttatgctggctgatgaatcagatcatgaaactctaacagca
atcctgagccctctcatagcagaaagagaggctatgaaaaacagtgaactgctccttgaa
atgggaggcatcctgagaacattcagatttgtctttcggggtacagggtatgatgagaaa
cttgtgcgggaagtggaagggctggaggcctcaggttccacttacatttgtaccctgtgt
gatgcaactcgcttggaagcatcccagaatttggtcttccactccataaccaggagccat
gctgaaaatctggagcgatatgaaatatggaggtccaacccataccatgaatctgttgat
gagctccgtgatagagtgaagggtgtttcagccaaaccttttattgagactgttccctcc
atagatgcattgcactgtgacattggcaatgcaacagaattctacaggattttccagatg
gagattggtgaactttacaagaaccctgatgtgtctaaagaggaaaggaagaggtggcag
ttgactcttgacaaacacctcaggaagaagatgaacttgaagcctatgatgaagatgagt
ggaaattttgctagaaagctcatgtccaaagaggcagtggaggcagtatgtgaattaata
aagtgtgaggaaaggcatgaagccctaaaagaactaatggacctttatctgaagatgaag
ccagtgtggcgatcctcatgccctgccaaggagtgcccggaactgctgtgccagtatagc
tacaattcacagcgttttgctgagctcttatctacaaagttcaagtacagatatgaaggc
aagattacaaattatttccacaaaacacttgctcatgttcctgaaatcattgaaagagat
gggtccataggggcctgggcaagtgaaggaaatgagtctggaaacaagctgtttcggaga
ttccgaaaaatgaatgccaggcagtccaaattctatgagatggaggatgtcttgaagcat
cactggctatatacctctaagtacctgcagaagttcatgaatgctcataaaacattaaaa
agccagagcttcaccattgattcagaggatagttttggtgattccttgccactggaggtc
ttggaaaaaaatgattcagcggtactctaa
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integrated database retrieval system
