Empidonax traillii (willow flycatcher): 114056855
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Entry
114056855 CDS
T05887
Symbol
TRIM25
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin/ISG15 ligase TRIM25
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04622
RIG-I-like receptor signaling pathway
etl05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
114056855 (TRIM25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
114056855 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114056855 (TRIM25)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114056855 (TRIM25)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114056855 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
ANCHR-like_BBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-B_box
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
114056855
NCBI-ProteinID:
XP_027738245
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MATLEPELRLAGLEEELTCCICLCLFSSPVTVPCGHNFCAACLELTWAGLSEGFSCPQCR
TTFAGRPKLHKNTVLCRVVEQLQGRAGNGDEEQEEEEEDGGAAGCEAEEPPVLCDSCREA
PAVQTCLTCTASFCHEHLRPHRDSPAFRDHQLCPPLRDLQYRKCPSHNRLFEFFCSNHGT
CICSLCLLGHKMCHTSPLEQAKANAQVMLKKKLVELNNQCERAARAMSTVKTNQSQSAET
ASRKKDLIRNEFSEIRAIIEEKENEVLKAIADEEKRVWNKFDYIYGVLGNKKNEIQSLRD
QVEMALTESDDVLFMKRAVALQRTSPKEAFVPTVEMDQNVMNSTYKFALNLKEVLKLTEA
QYKERKVEAKLGKPVGPPVAPTVKTSVGKKPHGARAPSQERFHKEKSLSHAPATPQVEAD
TKEKKKPAKKAPTSHQETKTAANPAAKELIDSFLKKSREELLQYGAKITLDYNTAHNNVM
LSENYTKMSVSDTPVGHKDHPQRFTEFRQVLGFQCFKRGIHYWEVELQQNSFCGIGVCYG
SMARHGPESRLGRNGSSWCIEWLNNKISSWHDDVEKCLPNTKATRIGVLLHCDGGFVIFM
AVGEKHNLIYKFKAQFTEALYPAFWLFSSGSVLSLCXMKQLRSCILV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctggagccggagctgcgcctggcggggctggaggaggaactgacctgctgc
atctgcctctgcctcttcagcagccccgtgacggtgccctgcggccacaacttctgcgcc
gcctgcctggagctcacctgggccgggctgtcggaggggttcagctgcccgcagtgccgg
accaccttcgcgggccgcccgaagctgcacaagaacacggtgctgtgccgggtggtggag
cagctccagggccgcgctgggaacggggatgaggagcaggaggaggaggaggaggatggg
ggggctgcggggtgcgaggcggaggagccccccgtgctctgcgacagctgccgggaggcg
ccggccgtgcagacctgcctgacctgcaccgcgtccttctgccacgagcacctgcggccg
caccgcgacagccccgccttccgcgaccaccagctctgcccgcccctgcgagacctccag
taccgcaagtgcccctcgcacaaccggctcttcgagttcttctgcagcaatcacggcacc
tgcatctgctccctctgcctgctcgggcacaagatgtgccacaccagccctttggagcag
gctaaagccaatgcccaggtgatgctgaagaagaagctcgtggagctgaataatcagtgt
gaaagagctgctcgggcaatgagcactgtgaaaaccaaccaaagccaatctgctgagaca
gcttccagaaagaaggatttgatcagaaatgagttttcagaaattagagctataattgaa
gaaaaagaaaatgaagtcttgaaagcaattgcagatgaagaaaagagagtttggaacaag
tttgattatatttacggtgttctgggaaacaagaagaatgaaattcagtctctcagagat
caggttgagatggcactgactgaaagcgatgacgttctgtttatgaagagagcagtagca
ctgcaacgaacatcaccaaaagaggctttcgttcctacagttgaaatggaccaaaatgtg
atgaattccacttataagtttgcccttaacctcaaagaagtactaaaacttacagaggct
cagtataaggagagaaaagtagaagccaaacttggaaaacctgtgggccctccggtggct
cctacagtcaaaacctctgttggaaaaaagcctcatggagcacgtgctccctcacaagag
cgtttccacaaagagaaaagcctttcccacgctccagccactccacaggtggaggcagat
accaaggagaaaaagaaacctgctaaaaaggctcctaccagtcaccaggagacaaaaact
gcagctaatcctgcagctaaagagcttattgacagctttctgaagaaatccagagaggag
cttctgcagtatggtgctaaaatcaccctggattacaacacagctcataacaacgtgatg
ctgtctgagaactacaccaagatgtctgtctcagacacccctgtgggtcacaaggaccac
cctcagcgcttcaccgagtttcgccaggtgctggggttccagtgcttcaagagagggatc
cactactgggaggtggagctgcagcagaacagcttctgtggcatcggggtctgctacggc
agcatggccaggcacggccccgagagccgcctgggcaggaacggcagctcctggtgcatc
gagtggctcaacaacaaaatatcctcctggcacgatgatgttgagaagtgcttacccaac
acaaaggccaccaggattggtgtgctgctccactgcgacgggggctttgtcatcttcatg
gcagtgggggagaagcacaacttgatctataaattcaaagcccagttcaccgaggccttg
taccctgccttctggctgttctccagtggcagtgtgctctccctctgttaaatgaaacag
ttaaggtcttgtatcttagtttag
DBGET
integrated database retrieval system
