Empidonax traillii (willow flycatcher): 114057071
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Entry
114057071 CDS
T05887
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
etl03037
]
114057071 (RTTN)
Cilium and associated proteins [BR:
etl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114057071 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
DUF445
Motif
Other DBs
NCBI-GeneID:
114057071
NCBI-ProteinID:
XP_027738678
LinkDB
All DBs
Position
Unknown
AA seq
2243 aa
AA seq
DB search
MELSSLVRKLGHELTEIRERSLKTILFKLDHNLISYADLVHEKALFRNLLEWFNFPVVPI
KEEVLNFVNSLIKHPPAAEKMIGIGAVEFFSQLRPDVDPNLQAIIDGIVDGLFFLPSELP
SSSLSVCYQAQSQPSVDQPVLPQEELFTGYFCQGRSHPPQLETPPKRTAVKCLKFSTFPW
LTLTSTDRHVLSSNESSLRSNNQSLIWSTCELLQDVIMQDFPAEIFLQRPKIVQSLLSLL
NLAFVGDGRHRLALQAVSCLQQLCIFLRSRLNFHRDPSFSSTEQGTTSQNSSISYCQEPR
GPPHSRNPSPGSSSPRPSVIGRTVQRPRGDGQDWDAVSSSGNSTQANANSRISLHSPFDV
GHIDLPDIENEDTLESQMKQLSLPQFCVSILENAVPLLRTGSQRVTMEVLELLVEDMFLV
GDAISENVWEDDSLFALELKDKLLLVLGLLGETILYHKTNISAEQPKVMLVHHRMAFISI
SLFTVRLLQMLLPVEKASKVIQKSLLNALFLLSLDMSFSLEYPSIHESIAAYLEQMSTEN
YSIYKQVSEAAYSIECTCSFMVEVHKKGDKNLSELVELADQALCSLPFHQHFPFLRECID
ICSNIWKSAETNSLLQVESQKMLLCLLSHPLVNIKTEAYHCCLEVVKNCLGIHNIAKPVS
SVCHGVHFLLHPKVLYEICTFGLQEDKNEVNSTAKAILIHLLQGRLIMAALTWSKFIEAL
GPVVPVLQGYADTKDTLGNCILSLSETTSDKGEGTLPRTTRLQAALRLLFSKKQLVRSVA
PKHLAFHLLNEEGANLKRPRVDGNVLSSITNLFIIERAIELKLDDKKESVIKAETVEKLH
DILTSDAVDLVLRKSAAEQLAVILEDTKMHEIVKKLGVIEKILACLNECVHVDGKLMESI
VLPCLMLLRKLVCADPVIRLSLAQQSSVLLLLFRVSLILQSDHAVLTETTVLLCLLLFDE
VARTETWADGITSNDTGVPTFSLPVAVVRRYHLPVRITAHHAVSPNAVVVPLSSESLAMK
PVSDMLKMAWNLSWYHGIENLLQLIDYEKEAEIFLDSLKLSSEDILILKISHTNYGLQDC
LNSIIQAASHRDVRTAVTRLSFYVLNDRLALKCSSGSCGTTLKSFVWQKAINRFLQVLPA
SVEDEKLLVDVLRFLNKLLREQKSSLESDHLKWILKSLLKNKPKSLLGLLVRPESQVRDE
IDETQTAVRQRLDKELIRLFNTLLVCSMSVADREGLELAGCFRTELALTLLQCLRLTDAP
HFYGLPSLERTLRGMVHVTALPGWSTYSAEVEPIAICKKYLTGLLEVISSFYVEWGGNAM
SFMGKGVTKSTVLCLLHLSHEMMAQAKDMDWISLWSLPYDNGEEQVLSHLGLAWLVPLWV
DRDPEVRFTALGIGSALTSLEAGCIALAESCQNISGGLWGTVINILLDQSECSMVRREAA
FILQNLLVIPIPTEDMKDCIWQGPCVHDEESGLSQTGIPALKALLYHCQFYEHVNQMVKH
CYLGCYMFDLNSYKEDNLNIEKGVTDLDDSLNLWKALSIQSKSSHSHSTSETMILSASPS
LGSVTELQATVPTSSTSFIPETVVDRLMAQGQSDTTITESPTQHASPMSAALSKKCGVVT
PALLSAVCSLLHNLLVVMPKDTGIALQQAHLLTALSSLVNANLVERYIMELKTPLGHPCH
IEHVKAQVIILLQYLSSVSRLLKSCLLMDSQLVIQNELMKSLLENTFRILTIRPKDELDT
ELTSVLRETWVDCFSLLATILWKSGQISFPSLTAALTNHCTAVMDTISDCIHLSTTYPAL
YVASLQFLSVLLNEEGRRQLQDKPSICQNPTISFLLEHVEGCQASVTHLTSLMIQVCERK
SSKDVLKEVATNALLSLLAVSKNAQKCALEAGLIDSCIENMKHIHAQLNLDSLKPGKAQR
KKEENLLKELRCSMQLLRNCLFQNQECKVAVLKAHLVPVLHSLWPWFLTDDSSMQIALHL
LCVYTANYPEGCASLCWTSGGQSSLLSARGAAGSSLTHNILRLASQVSNDNSPVQQVVFC
LISNLALSHDCKGIIQKSNFLQNFLSLSLPKGSSKNPGNVSTLWLKLLLNISFGEDGQQM
VMKINGFLDQIVEMCKCKHKSSQHLALLILHNICFSPTNKPKILGNEQAIAVLSACLESD
SPAVQRVGAASLWALLHNYQKAKVTLKNPSIRRRIDEAYSLVKKSVHSVCSDSRTENAGS
CGVLYILDSEQQDTQKVRALNAK
NT seq
6732 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtcgtcgctcgtcaggaagctgggtcatgaattgacagagataagagagcga
tctctgaagactattctgtttaaattagatcacaacttgatttcgtatgctgatctggtc
catgaaaaagcactttttcgtaaccttttggagtggttcaatttcccagtcgtaccaata
aaagaggaagtactaaattttgtgaacagtttgatcaagcatccacctgctgccgagaaa
atgattggaattggtgcagtggaatttttctctcagcttcgccctgatgtggatccgaac
ttgcaggccataattgatgggattgtggatggactgttcttccttccttctgaacttcct
tctagttctttatcagtatgttatcaagctcagtctcagccttcagtagatcaaccagtt
ctgcctcaagaggaattattcactggatatttttgtcaaggtagaagtcatccaccgcag
ttagaaacacctcccaaaagaacagctgtgaaatgcttgaaattttccacgtttccttgg
ctaactctgacttcaacagatagacatgttctttcatcaaatgaaagctctttgagaagt
aacaaccaaagtttaatttggagtacctgtgagcttcttcaggatgtgattatgcaagat
tttcctgctgagatcttccttcaaaggccaaagattgtacagagccttttgtccctgcta
aacctggcttttgtaggagatggaagacatcggttagctttgcaggctgtgtcctgcttg
caacagttatgcatcttcttgagaagcaggcttaactttcatagagatccaagtttttct
tccacagagcaaggcacaacttcccagaattcatctatatcttactgtcaagagccaaga
ggtcctcctcattctcggaatccatcacctggaagtagtagccctcggccatctgtaatt
ggacggacagttcagcgtcctagaggagatggtcaagattgggatgcagtatcttccagt
ggaaacagtactcaagcgaatgcaaactccagaatctccctgcattccccatttgatgta
ggacatattgatctaccagatattgaaaatgaggacactttggaatcacagatgaagcag
cttagccttcctcaattctgtgtttccattttggaaaatgcagtacctcttctaagaaca
ggcagtcagagagtgacaatggaagttctcgaattgcttgttgaagacatgttccttgtt
ggtgatgctatttctgaaaatgtttgggaagatgatagcctttttgcattggaattgaaa
gataaattgcttctggtcttgggtttacttggagaaactatattatatcacaaaaccaat
ataagtgcagaacaacccaaggtgatgttggtgcatcacagaatggcatttattagcatt
tcactcttcactgttagattgctgcaaatgcttctccctgtagaaaaggcaagtaaagtt
atacaaaagagtttgctgaatgctttatttcttctctctctggacatgtccttctccttg
gaatacccaagcatccatgaatccattgcagcctatctggagcaaatgagtactgagaac
tacagtatttataaacaagtttcagaagctgcatattccattgaatgcacttgtagcttt
atggttgaagttcataaaaagggggacaagaatctttctgaattagtagagttggcagat
caggccttgtgtagtctacctttccaccaacactttcccttccttcgggaatgcattgac
atatgctcaaatatttggaagtctgctgagaccaactcattgctccaggtggagagtcag
aagatgcttctctgcctcttatctcatcctttggtgaatataaaaactgaagcctatcac
tgctgtttggaagtggttaagaactgtttaggtattcataatattgcgaagcctgtgtct
tcagtctgccatggagtacattttcttctacatcccaaagtgttatatgaaatctgtaca
tttggccttcaggaagataagaatgaggtgaactcaacagccaaggccattctgatacat
ttgttgcaaggacgattaataatggcagcattgacttggagcaagtttattgaggccctc
ggtcctgtcgttcctgttttacagggttatgctgacacaaaagatactttgggtaactgc
atcctctctctgagtgaaacaacttctgacaaaggagagggtactctccctagaactact
agactacaggctgctctgcgccttctcttctcaaaaaagcagttggttcgttctgtagca
cctaaacatttagcattccatcttttgaatgaagaaggggcaaacctgaagcgcccacgt
gtggatggtaatgtgctttccagcattacaaacttatttattatagaaagagctattgag
ctaaaattggatgataaaaaggagtcagtaattaaggcagaaactgttgaaaagctgcat
gatatcttgacttctgatgctgttgacctagttttacggaagtctgcagctgagcagctc
gctgtcattttagaagataccaagatgcatgaaattgtgaaaaagttgggtgtgatagaa
aagatactggcttgccttaatgagtgtgtacatgtggatggcaagcttatggaatccata
gtgttaccatgtctcatgctcttacgcaaacttgtgtgtgctgatccagttattcgcctg
tccctagcacagcaatcatctgtactgcttttgctattcagagtttccctgatactccaa
agtgatcatgctgttttaactgaaactacagtattgctttgtcttctgttgtttgatgaa
gtagcaagaacagaaacatgggctgatggtataaccagtaatgatactggagtgcctacc
tttagcttgcctgttgctgttgttagaaggtatcatcttccagtcaggatcactgctcat
catgcagttagccctaacgctgttgtggtgccattgtcttctgagagcttggctatgaaa
cctgtgtcagatatgcttaaaatggcttggaatctgtcctggtaccatgggattgaaaac
ctattgcaactgatagattatgagaaggaagcagaaatatttttagactcgctaaaacta
tcctcagaagatattcttatactgaaaatatctcacacaaactatggactgcaagattgt
cttaattcaatcattcaggcagcatcccacagggatgttaggactgctgttactaggctt
agtttctatgttcttaatgacagacttgctttaaaatgcagttctgggtcttgtggaacc
actttaaagagctttgtttggcaaaaagcaataaacaggtttctgcaagtgcttccagct
tctgtggaggatgaaaagcttttagtagatgttttaaggtttttaaataaattacttaga
gagcagaaatcaagtctggagtcagaccatctaaagtggatcttgaaatcattgcttaaa
aataagccaaaatcccttttgggcctcctggtgcggccagaatcccaagtgcgggatgaa
atagatgaaacacagactgctgtcaggcagcgactggataaggaactcattcgtcttttc
aacacgttattggtttgttccatgtcagtggctgacagagagggcttggaacttgctggc
tgtttcagaacagagctcgctctgacgctgcttcagtgcttaaggctaacagatgcacca
catttttatggactcccttcactggagagaacattacgaggaatggttcatgttactgcg
cttccaggctggagcacctattctgctgaagttgaacccatcgcaatttgtaagaaatat
ttaacaggtctccttgaggtcatctcgtcgttttatgttgaatgggggggaaatgccatg
tccttcatgggaaaaggtgttacaaaaagcacagttctttgcttgcttcacttgtctcat
gaaatgatggctcaagccaaggatatggactggatatctctttggtctttgccttatgat
aacggtgaagaacaagttctctctcatctaggtctggcatggctggttcctttatgggta
gatagagaccctgaggtcagatttacagcacttggaattggatcagctcttacatctctt
gaagcaggatgtattgctttagcagaaagttgtcagaatatttcaggaggcctgtgggga
acagtgataaacatcctcctggatcaatctgaatgtagcatggtacgcagggaggctgct
tttattctacaaaatctccttgtgattccaattcctacagaagacatgaaagactgtatt
tggcaaggtccttgtgtacatgatgaagaatctggcctctctcagacaggaatccctgca
ctgaaggcccttttgtatcactgccagttctatgaacatgtgaatcagatggtgaaacac
tgttacctaggatgttatatgtttgatttgaattcttacaaggaagacaacctcaacata
gaaaaaggtgtaactgatttggatgattctcttaatctttggaaggctctatccattcaa
agcaaatcttcacattctcactcaacatctgaaactatgattctgtctgcatcaccatca
ctggggagtgttactgagcttcaggcaacagttccaacaagttcaaccagttttattcct
gaaactgtagttgatcgtctcatggcacaaggtcaaagtgatacaaccataacagaatct
ccaactcaacatgcttctcccatgtctgctgctctgtctaaaaagtgtggtgtagtcacg
cctgcccttttgtcagctgtttgcagccttcttcacaatctgctggttgtcatgccaaaa
gatactggaattgctcttcagcaagcacatttgctaacagctctcagcagtcttgtaaat
gctaatctggttgagagatatatcatggaactgaagactccattgggtcatccatgtcat
atagaacatgtaaaagctcaggtcataatactacttcagtacttgtcatctgtgtccagg
cttctaaaatcatgtttattgatggactctcagcttgtaatccagaatgaactgatgaaa
tctctcttggaaaataccttcaggattctcaccatacgccccaaagatgagttagatacc
gagttaacatctgtacttcgtgaaacatgggtagactgtttcagccttctagctacaata
ttgtggaaaagtggccagatatcatttccatctctgacagctgcccttacaaatcattgt
acagcagtaatggataccatttctgattgtattcatctgtctaccacatatcctgcttta
tatgtggctagtttacagttcctctctgtccttttgaatgaagaaggaagaagacagctc
caagataaaccgagtatatgtcagaatccaactattagctttcttttggagcacgttgaa
ggatgccaggcatcagtaactcatcttacttcattaatgattcaggtctgtgaaagaaaa
tcttcaaaggatgtgctgaaagaagttgctacaaatgcactgctgtctttgttagctgtc
agtaaaaatgcccagaaatgtgctttggaagctggcctgatagacagctgtatagaaaac
atgaagcacattcatgcacagttgaacttggattccctaaagcctgggaaagcacagaga
aaaaaggaggagaaccttctcaaggagttaaggtgttctatgcaactcctcaggaactgt
ctctttcaaaatcaagaatgcaaagtggcagtgctcaaagctcatcttgttcctgttctg
cattcattatggccgtggtttttaacagatgactcctcaatgcaaatagctctgcatttg
ctttgtgtctacactgcaaactatcctgaaggttgtgcttcactttgttggaccagtggt
ggacaatcctcacttctgtctgcacgaggtgcagctggcagttcattaacgcataacatc
ttgagattggcttcccaagtgtcaaatgataacagcccagttcagcaggtggtcttttgt
ctaatttctaaccttgctctctcccatgactgtaaaggcattattcagaagagtaacttc
ctgcagaactttctgtctctttcattaccaaaaggaagtagtaaaaatcctggtaatgtg
tctactctttggctaaagctgctactgaacatatcttttggagaagatggacagcagatg
gtcatgaagataaatggttttttagaccagatcgtggaaatgtgtaaatgcaaacacaag
agcagccaacatctagcacttctaattctacacaacatatgttttagtccaactaataaa
ccaaagatattaggtaatgagcaagcaattgcagtactgtctgcctgtttggaaagtgac
agtcctgctgttcagagagtaggggcagcttcgctttgggctttgcttcacaactatcag
aaggcaaaagttactttgaagaatccatcaataaggagaagaatagatgaggcttattct
ttagtgaagaaaagtgtgcacagtgtatgctcagattcaagaactgaaaatgctggcagt
tgtggtgtgttatacatactagattcagaacagcaagatacacaaaaagtgagagcactc
aatgccaaatga
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integrated database retrieval system
