Empidonax traillii (willow flycatcher): 114057171
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Entry
114057171 CDS
T05887
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04136
Autophagy - other
etl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114057171 (ATG4C)
04136 Autophagy - other
114057171 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
etl01002
]
114057171 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114057171 (ATG4C)
03029 Mitochondrial biogenesis [BR:
etl03029
]
114057171 (ATG4C)
Peptidases and inhibitors [BR:
etl01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
114057171 (ATG4C)
Membrane trafficking [BR:
etl04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
114057171 (ATG4C)
Mitochondrial biogenesis [BR:
etl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
114057171 (ATG4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
114057171
NCBI-ProteinID:
XP_027738925
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MEATGTDEVEKIKSKFMSAWHNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKTEESGELST
DGSNFDKINTEISGNVEEFRKDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLL
AQGLMLHFLGRAWVWPEALDMDSDSESWTSHTVRKLTASFEASLTAERDPKILPQPQAQP
QRGTRRNWDVNERRNEAYHRKIISWFGDSPLAAFGLHQLIEYGKKSGKMAGDWYGPAVVA
HILRKAVEEAKDPELQGVTVYVAQDCTVYSSDVIDRQCSLMDSAKAGTKAVIILVPVRLG
GERTNTDYLEFVKGILSLEYCVGIIGGRPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIK
DFPLESFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTF
VKGHSKDYDFASSPLHEENDLFSEDEKKRLKRFSTEEFVLL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaagccacagggacagatgaagtagaaaagataaaatcaaagtttatgtctgcatgg
cacaacatgaaatacagttgggtgttgaaaacaaaaacttacttcagtagaaactctcca
gtctttctgctgggaaaatgttaccacttcaaaactgaggaatctggtgagctctctaca
gatgggtccaattttgataaaatcaacacagagatttcgggaaatgttgaggagtttcgt
aaagattttatttcccggatctggctgacgtacagagaggaattccctcagataaaaggg
tctgcattaaccacagactgtggctggggctgcacactgagaactgggcagatgctgctg
gctcagggccttatgcttcattttcttgggagagcttgggtgtggccggaggcgctggac
atggactcggactcggagtcgtggacatcgcacacggtgcggaagctcacggcgtccttc
gaggcgtcgctcacggccgagagggaccccaagatcctgccccagccacaggcacagccc
cagcggggcaccaggaggaactgggatgtcaacgagaggagaaacgaagcttatcacaga
aaaataatctcttggtttggcgactccccgctggcagcttttggcctgcaccagttgata
gaatatgggaagaagtccgggaaaatggcgggggattggtacggcccggccgtcgttgct
cacattttaagaaaagctgttgaagaagcaaaagaccctgagctgcagggagtaacagtc
tatgttgctcaggactgtacagtgtacagctccgatgtcattgacagacagtgttctctc
atggactctgcaaaagcaggcacaaaagctgtaattatattggttcctgtgagactcggt
ggagagagaacaaacacggactacttggagtttgtaaagggaattttaagcttggagtac
tgtgttggaattattggtggcagacccaagcagtcgtattactttgctggattccaagat
gacagtttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaag
gatttccctcttgagtcattccactgtccttctcccaaaaagatgtcattcaaaaaaatg
gatccgagctgcacaataggattttactgtcggactgtgcaggactttgagaaggcttct
gaagaaatcaccaagatgctgaaatcttcatccaaggagaaatatccattgtttactttt
gtcaagggtcattctaaagactatgactttgcttccagtccactccatgaagaaaatgac
cttttctctgaggatgaaaagaagagattaaaaagatttagtacagaggagtttgtcttg
ctttaa
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