Empidonax traillii (willow flycatcher): 114057284
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Entry
114057284 CDS
T05887
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114057284 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etl03041
]
114057284 (DHX15)
03009 Ribosome biogenesis [BR:
etl03009
]
114057284 (DHX15)
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114057284 (DHX15)
Spliceosome [BR:
etl03041
]
Complex A
U2 snRNP components
U2 related factors
114057284 (DHX15)
Complex B
114057284 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
114057284 (DHX15)
Ribosome biogenesis [BR:
etl03009
]
Eukaryotic type
90S particles
Helicases
114057284 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
114057284
NCBI-ProteinID:
XP_027739153
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRTTDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLR
PTSNSTYYGAAGLPAIKQAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctcgacctgggcgacgactacagctccagcaagaagcgcacc
accgacgggaaagatcgggaccgggacagggaccgcgatgaccgttccaaagatcgcgac
agggatcgtgacagagatagagatcgtgacagagaaagggacaaggagaaggatctgcga
cctacatccaactctacatattatggggctgctggtttgccagctataaaacaagcaatg
attccacacagtattaaccctttcacaaatctaccacatacaccacgatattatgacatc
ctgaaaaaaaggctacaacttcctgtctgggaatataaagaaagatttacggatattttg
attaggcatcagtcatttgtgcttgtcggagagactgggtctggtaaaacaacacagatc
ccccagtggtgtgttgactacatgcgctccttgcctggcccgaagaggggtgtggcgtgt
acccagcccaggcgagtggcggcgatgagcgtggcacagcgggttgctgatgagatggat
gtcatgctggggcaggaggtcggctactccattcgatttgaagattgcagtagtgcaaaa
accatcttgaagtatatgactgatggtatgttacttcgtgaagcgatgaatgatcctttg
ctggagcgctatggtgttataattcttgatgaggcccatgagagaacactggctacggat
atcttgatgggagttctgaaggaagttgtaagacagagatctgatttgaaggttatagtt
atgagtgctactttagatgctggcaagtttcagatctattttgataattgtcctcttcta
actatcccgggtcgcacccatcctgtggagatattctatactccagaaccagaaagggat
taccttgaggctgccattcgaacagtgatccaaattcacatgtgtgaagaagaagaggga
gatctgttactctttcttactggacaagaggagattgatgaagcctgcaagaggataaaa
cgtgaaattgatgatttgggtcctgaagttggtgacatcaaaatcattccattgtattcc
acccttcctccacagcaacagcaaaggatatttgaacctccaccaccaaaaaaacaaaat
ggagcaataggaagaaaggttgttgtatccactaacatcgctgagacatcattaacaata
gatggtgttgtgtttgtgattgatcctggctttgcaaaacagaaggtgtacaaccctcgt
atcagagtggagtctctgttggtgactgccatcagtaaagcttctgctcagcagcgagct
ggccgtgctggccgtactcgaccaggcaagtgcttcaggctctacacagagaaggcttac
aagactgaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatctgta
gtattacagctcaagaagcttggtatagatgatttggtgcactttgattttatggatcct
ccagctcctgaaactctgatgagagccttagagcttttaaattacctggctgctttaaat
gatgatggagacttgactgagttgggatccatgatggctgaatttccattggacccacag
ctggctaaaatggttattgcaagctgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaagcaaaatcatgagtcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgccccgtagaagcacagactttaccagccgagactattacatcaacatcaga
aaggcattagttactgggtatttcatgcaggtggcacatttggagcgaacggggcattac
ttaactgtaaaagataaccaggtggtgcagttgcatccctccactgttcttgatcacaaa
ccagaatgggtgctgtataatgagtttgtccttacaacgaagaattacatccggacatgt
acagacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgcgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaag
gaatactcacagtactga
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integrated database retrieval system
