Empidonax traillii (willow flycatcher): 114057466
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Entry
114057466 CDS
T05887
Symbol
DDX52
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etl03009
]
114057466 (DDX52)
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114057466 (DDX52)
Ribosome biogenesis [BR:
etl03009
]
Eukaryotic type
90S particles
Helicases
114057466 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SecA_DEAD
Cas3-like_C_2
DUF7500
Motif
Other DBs
NCBI-GeneID:
114057466
NCBI-ProteinID:
XP_027739582
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
METHELFRRLGAGARFDLRRFEGDARRFGVVRENRGGVSPENLDFFGSKEGAPRGSAEEG
RALAGAGEEAKQQKDGAGKNAGEAAGKRKRTAESSEGRRKKKTTRGAASMPELSENSGIK
WMSSLEAKLEEAKEKKPTAEKLERLRREKINRFRNQHRINIQGTDLPDPIATFEQLQEEY
KVHPKILENIQAAGFHVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFCIPLLTHLKQP
RNKGFRAVIISPTRELASQTHRELVKLAEGTGFRIHMIHKAAEAAKKFGPKSSKKFDILV
TTPNRLIYLLKEDPPAIDLSSVEWLVVDESDKLFEDGKSGFREQLASIFLGCTSHLLRRA
LFSATFAHDVEEWCKLNLDSVVLVSVGARNSAAETVEQELLFVGSETGKLTAMRELVKKG
FAPPVLVFVQSIERAKELFHELVYEGINVDVIHADKTQQQRDKVVHSFRAGKIWVLICSA
LLARGIDFKGVNMVINYDLPTSAVEYIHRIGRTGRAGHRGKAVTFFTEDDKPLLRSIANV
IQRAGCPVPDYIKHLPKLQSKQKKKFIKKPLTRESICTTPKCFLKKGKRKMKTTKENIKE
KKKLKENKQGVKLQTVSES
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggagacccacgagctgttccgccgcctcggcgccggagcccgcttcgacctgcgccgc
ttcgagggcgacgcgaggcgcttcggggtggtcagagaaaaccgcggcggcgtctccccg
gagaacctcgacttcttcgggagcaaggagggagcccctcgggggtctgccgaggagggc
agggcgctcgcgggggctggagaggaggcgaagcagcagaaggatggagcagggaagaac
gccggagaggcggcgggaaagaggaaaagaacggcagaaagcagtgaggggagaagaaaa
aagaagacgacgcgaggagcagcatcaatgccagagctgtcagaaaacagtgggataaag
tggatgtcctctctggaagcaaaacttgaagaggcaaaagaaaaaaaacctactgcagag
aaacttgaacgtttgaggagagaaaagataaatcgcttcaggaatcagcacaggatcaac
attcagggaacagacctccctgacccgattgccacctttgagcagcttcaggaggagtac
aaagtgcaccctaaaatcctggagaacatccaggctgcagggttccatgtccccacacca
atccagatgcaggccattcctgtcatgctgcacggtcgggagcttctggcttcagctcct
actgggtctggaaaaacactggcattttgtatccctctcttaacacatctgaaacaaccc
aggaacaaaggattcagggctgtgatcatatcaccaacccgagagcttgccagccagacc
caccgggaactggtgaagctggcggagggcacgggcttcaggatacacatgatccacaag
gcagctgaggcagccaagaagttcgggcccaagtcttccaagaaatttgatattctggtt
actactcccaacagactcatttatttgctgaaagaagatcctccagcaatagacttgagc
agtgtggagtggctggtggtggacgagtcggacaagctgtttgaggatggcaagtcgggg
ttccgggagcagctggcttccatcttcctgggctgcacctcccacctgctgaggagggcc
ctgttcagcgccaccttcgcccacgacgtggaggagtggtgcaagctcaacctggacagc
gttgtcctggtgtctgttggggccagaaactctgcagcagagacagtagaacaagagctg
ttgtttgttggatctgagacaggaaaactaacagcgatgagagagcttgttaaaaagggt
tttgctcctccagtccttgtttttgtacagtcaattgagagggccaaagagctcttccat
gagcttgtttacgaaggcatcaatgtggatgtcatccatgcagacaagactcagcaacag
agggataaggtagtgcacagtttcagagctgggaagatctgggtgctcatctgctcggcc
ttgctggctcgagggattgacttcaaaggagtgaacatggtcatcaattatgacttgcca
acgagtgcagtggaatacatccacaggataggtcgtactggaagagcagggcacagagga
aaagcagtcactttctttacagaagatgataaacctttattacggagtatagccaacgtt
atccagcgagctggctgtcctgtgccagactacataaaacacctgcccaaactgcagagc
aaacaaaagaagaaattcattaagaaacccttgacaagagaatctatttgtacaaccccg
aagtgcttcttgaaaaaaggcaaaagaaaaatgaaaactacaaaggaaaatattaaggaa
aagaagaaacttaaagaaaacaaacagggcgttaaattacagactgtttcagaaagctga
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