Empidonax traillii (willow flycatcher): 114057616
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Entry
114057616 CDS
T05887
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
114057616 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114057616 (SPATA13)
Membrane trafficking [BR:
etl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
114057616 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
114057616
NCBI-ProteinID:
XP_027739922
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MTTFPNGCGNGTTVTCIVMDNKEPQNQTACVSRDGGHNTSNSHEEEFQEDKLSPSKIMRF
FTTPRKRANSSSDRPRSLVLMGNSSTWNAFSSIRKMGSFKKLKSSVLQEVKTRECSDIVN
ENSVGKHGSNGAVVRVQPNRYSYSGPLHDFQNAVDGLASDCSDAEDSDESFLRNTHRSRS
IRRAYGAGRINLLDTDKVQSHHNCVRPTSPVIAEPKICEILVKDSENNRMIYRRSKSSDN
LNFLKKSSFKRKSTSNLADLKVANEKQMPTRTVSVASADSEKSGGNPERRSKRWKSPIRA
KDFDRVLKLVSNVTDVTWKKDASKSTAPPPVEQSQRTRSNSRLHDDYSRRVSSSTDHDRK
RCTSPVSSPDSSLQGTPCLQSPVVAQDKEAEMNVAVAEDKSLRTSSGILDSDSLSPTLND
ISPFPNEVFYSDSDEPKATQEFTDEAENPHVPVRPITPKPQSPTAGKVKCSMNFQCQNHH
STLSLSSSESEERVEVPGLKLGRNPVCFQDSVQTVYYDDGNEDSGISSHSQLSLNLASGA
EEKKEEVVSDDHWKRSTSQDENKADSQKVTPRRWGSGKRSRPRPLSDYGQMSIRSFSIPE
DAVAVESQKTDCMDGENQPGLSSVGSVVQSNTVGYHRGRKRRPISVIGGVNFYGNDPVGE
REGLLTQPVTRPPVPAHQVPPYKAVSARFRPLTFSQSTPIGLDRVGRRRQMRTSNVAADG
GTESSALVDDNGSEEDYSYEELCQAAPRYLQPGGEQLAINELISDGTVVCAEALWDHVTM
DDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEEVPENCNSIQDEE
QDADTSKHRQKIAENKDQMRTNVIQEIMNTEQVYIKHLKDICEGYIRQCRKHTGMFTTAQ
LSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPSA
CIELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEH
SDYNNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELIHSGE
LTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDEMEIVDIEDGKDRDFN
INVKNAFKIINRTTEEIHLFCAKKQEDKKRWMEACESERRRVQEDKEMGMEISENQKKQA
MQNARKSRQGKIKGVSYNGCPVPPPHQTLHPIHQRHITVPTSVPQQQVFALAEPKRKPSL
FWHTFNKLTPFKK
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatttccgaatggctgtggaaatggcaccactgttacttgtatagttatggat
aataaagagccccaaaaccagactgcctgtgtcagtcgtgatgggggacacaacaccagc
aacagtcatgaggaagaatttcaagaggataaactcagcccttccaaaatcatgcgcttt
ttcaccacccctcggaaacgggctaattccagctctgacaggcctcgttctctggttttg
atgggcaactcatccacgtggaatgccttctcttccatcagaaaaatgggttctttcaag
aagttgaaatcgtcagttctgcaagaagttaaaacaagggaatgctcagacatcgtaaat
gagaacagcgtaggcaagcatggctcaaatggggcagtggtgcgagttcagcctaacaga
tattcctattcggggcctctacatgatttccagaatgcagtggatggtttagcttctgac
tgctctgatgcggaggacagcgatgagtctttccttaggaacactcatcgttcgcgcagc
atcaggcgggcttatggtgctggccgcataaacttgctagacacagataaagtccagagt
catcacaactgtgttaggccaacatcacctgtcattgcagaaccaaagatctgtgagatt
ttggtgaaagactctgaaaacaacaggatgatttatcggagaagcaaaagctcagataat
ttgaactttctgaaaaaaagctcattcaaacggaagtccacctcaaaccttgctgatctg
aaggttgcaaatgaaaaacagatgccaacaaggactgtgagtgttgcttctgctgactca
gagaaaagtggtggaaaccctgagaggagatccaaacgatggaagagccctatcagggca
aaggattttgatcgagttttgaaacttgtcagtaacgttacagatgtcacatggaagaag
gatgcctctaagagcacggctcctcctcccgttgagcagtcccagagaacaaggtcaaac
agcagactgcacgatgactactcccgcagggtttccagcagcacggatcatgacagaaag
agatgcacctccccagtatccagtccagactcttccttgcagggaacaccttgtctgcaa
agccctgtggttgctcaggataaagaggccgaaatgaatgtagctgttgctgaagacaaa
agcctcaggacgtcatcgggtatcctagactctgatagcttatcacccacactgaatgac
attagtccatttcccaatgaagtcttttattcagactcagatgaaccaaaagctacccag
gagtttacagacgaagctgaaaatcctcatgttccagtcaggccgattactccaaagcct
caaagtcctacagcagggaaggtcaagtgcagtatgaatttccagtgtcaaaaccatcac
agcacattgtcactgagctcatcggagagtgaggagagagttgaggtaccagggctgaag
ttgggaaggaatcctgtttgcttccaggactcagtgcaaactgtgtactacgatgacgga
aatgaagacagtggcataagcagccactctcaactgagcctcaatttagcctctggtgct
gaagagaaaaaggaagaggttgtttctgatgaccactggaagaggtccacatcccaggat
gaaaacaaggcagactcacaaaaggtcacacccaggagatggggctctggaaaaagatct
cggcccagacctctctcagactatggccaaatgtcgatcagaagtttctctataccagaa
gatgcagttgcggtggagtctcagaagacagactgcatggatggagaaaatcagccagga
ctgtcatccgttgggtctgtggtccaaagcaacacagtaggctaccacagagggcgaaaa
agaagacccatctccgttataggtggggttaatttctatggaaacgatccagtaggagag
agagaaggtctgctgacacaacctgtaacacggccacctgttccagcacaccaggtgccc
ccgtacaaagctgtttcagccaggtttcggccactcaccttttcacaaagtaccccgatt
ggcctggaccgggttggacggaggcggcagatgagaacatctaatgttgctgcagatggt
gggactgaatcttcagccttagtggatgacaatggcagtgaggaagattacagctacgag
gagctctgccaagctgctcccaggtacctgcagcccggaggcgagcagctagcaattaat
gagctgataagcgatggcactgttgtctgtgcagaggctctctgggaccatgtcactatg
gatgatcaagagctgggcttcaaagctggagatgtcattagagttctagaagcttccaac
aaagattggtggtggggaagaaatgaggacaaggaagcctggtttccagctagctttgtc
aggctgcgagttaatcaggaagaagtgccagaaaattgtaatagtatccaggatgaagaa
caagatgcagacactagcaagcatcgccagaaaatagctgaaaacaaggatcagatgaga
accaatgttatacaggaaattatgaacacagaacaagtctatatcaagcatctcaaggac
atctgtgagggttatattcggcagtgccgtaaacatacaggaatgttcaccacagctcag
ttaagcaccatttttggaaatattgaagatatttacaagttccaaaggaagtttctgaaa
gatcttgagaaacagtacaataaagaagaacctcatctaagtgaaatagggtcatgtttt
cttcaacatcaagaaggctttgctatttattcagagtattgtaacaatcatcccagtgcc
tgcattgaactttccaaactaatgaaacagggcaaataccgccacttcttcgaggcctgt
cgcttgcttcagcagatgattgacattgctattgacggttttcttctcacgcctgttcag
aagatctgcaaataccctctacagcttgcagagttgctcaaatacaccactcaggaacac
agtgattataacaacataaaagctgcatatgaggctatgaagaacgttgcgtgcctgatc
aatgagcgaaaacggagactagaaagcatagacaagattgcacgttggcaagtctctatc
gtagactgggagggaccagatgtgttagccagaagctcagaactgatccactcaggagaa
ctgaccaaaatatcaaaacaaggcaaaagccagcagaggactttcttcctttttgaccat
cagcttgtattctgtaagaaggacttgctgagaagggacatcttgtattataaagatcgt
attgacatggatgaaatggaaattgtggacatcgaagatggcaaagacagagactttaac
attaatgtcaagaatgcttttaagataataaacagaacaacagaagagattcatttgttc
tgtgcaaaaaaacaggaggataaaaagagatggatggaggcatgcgaaagtgaaaggaga
agagttcaggaagacaaggaaatgggtatggaaatctcagaaaaccagaagaaacaagcc
atgcagaatgcccgtaaatcaaggcaaggaaaaattaaaggtgtaagctataacgggtgt
cctgtgcctcctccacaccagaccctgcatcccattcaccagcgacacatcactgtgcct
accagcgtcccgcagcagcaggtctttgccctggcagaacccaagcggaagccttccctc
ttctggcataccttcaacaaactcactccctttaaaaagtga
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integrated database retrieval system
