Empidonax traillii (willow flycatcher): 114057655
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Entry
114057655 CDS
T05887
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
etl04990
]
114057655 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
etl04990
]
Other domain-containing proteins
Patched domain-containing proteins
114057655 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
114057655
NCBI-ProteinID:
XP_027740043
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MVLRGPWGSCGGPGAALALLRALRTRMLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVL
ISILLGASFSRYQVEENVEHLLAPTHSLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYG
RVIITSFRKANMLDQHHTDLILKLHSAVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIV
HVLEELKAARSSNRTNFAITYPITHLKDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYY
LQAINSLNDMVAEKWESIFCDTVELFQKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLIT
SLVLVVTLAILCCSMQDCVRSKPWLGLLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPF
VMLGHGLYGTFEMLSSWRKTREDQHVKERTAAVFADSMLSFSLTTAMYLVTFGIGASPFT
NIEAARIFCCNSCIAIFFNYLYVLSFYGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKP
AWYRFLLTAKFSEDTDDSEETNTYESHLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISF
ALMGYLQVSEGSDLSNIVATATRTIEYTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQED
VLEYTKGFVRISWFESYLNYLRKLNISTGLPKKNFTDMLRNSFLKTPQFAHFSEDIIFSK
KYNNEVDVVASRMFLVAKTMETKREELYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYAS
SVGAPLQNSCISALFLLFFSAFLVADSLINVWLTLTVASVEFGVIGFMTLWKVELDCISV
LCLIYGINYTIDNCAPLLSTFVLGKEFTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAA
VPSNLTRTLFRCLFLIALVTFFHCFAILPVILTFLPPSKKKRKEKKNPENREEIECVEMV
DMDSTRVVDQITTV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgcgggggccgtgggggagctgcgggggccccggcgcggcgctcgccctcctg
cgcgccctccgcactaggatgttgcggcaggtcttgcacagggggctggggacgtccttc
tcccggctcggccacttcgtcgccagccacccggtgtttttcgcctcggcgcccgtgctt
atctccatccttctgggcgccagcttcagccgctaccaggtggaggagaacgtggagcac
ctcctggcccccacgcacagcctggccaagatcgagaggaacctggtggacagcctcttc
ccggtgaaccgctccaagcaccggctctactccgacctgcagacgccggggaggtacggc
cgggtgatcatcacctccttccgcaaggccaacatgctggaccagcaccacaccgatctc
atcctcaagttgcactctgcagtgaccaggatccaagttcaaagacctggtttcaattac
acgtttgcccatatatgtatcctgaacaatgacaagacatgcatagtggacgacatagtg
catgtactggaggaattaaaggctgctcgttcttctaatcgaactaattttgcaatcact
tatccgattactcacttaaaggatggcagggaagtgtataacgggcatcagctcggtggg
gttactgtgcacagcaaggaccgggtgaagtctgcagaagccattcagctcacctactac
ttgcaggcaatcaactccttgaatgacatggtggcagagaagtgggaatccattttttgt
gacactgttgaacttttccagaaatccaacaggaaagtcaaaatgtatcctttcacttct
tcttcgctgaaggaggatttccagaagacgagcagggtatcagaacgctacctgatcaca
agcttggtccttgtggtcaccttggccattctctgctgctccatgcaggattgtgtccgc
agcaaaccctggcttggcctgctgggattgctgactgtgacccttgccaccctgaccgca
gctgggatcatcaatctcactggtgggaaatacaattccaccttccttggaatccccttc
gtcatgttaggtcacgggttatatgggacttttgaaatgttgtcctcctggagaaaaact
agagaagaccaacatgttaaagagaggactgcagctgtatttgcagactccatgctctcg
ttttctctcaccactgccatgtacctggtcacttttggaataggtgccagtcccttcact
aacattgaagcagccaggattttctgctgcaattcctgtattgcaattttcttcaactac
ctctatgtactctccttttatggttccagcctggtgtttactggctacatagaaaacaac
taccagcatagtatcttctgcagaaaggtaccaaagccagaggtattgcaagagaagcct
gcatggtataggtttcttctgacagccaaattcagtgaggacacagatgattcagaggaa
acgaacacttacgagagtcatcttttggtgtggttcctgaaacgctattattgtgactgg
ataacaaacacttatgtcaagccttttgtagttctcttttaccttgtttatatttccttt
gccttaatgggctacctgcaggtcagtgaagggtcagacctgagcaacatcgtagcgact
gcgacacggaccatcgagtatacgactgcccagcagaagtacttcagtaactacagccca
gtgattgggttctacatctacgagtcaatcgagtactggaacaccagtgtccaggaggac
gtgctggagtataccaagggctttgtgaggatatcttggttcgaaagctacttaaattac
cttaggaaactcaacatatctactggattgcccaagaagaatttcactgatatgttgagg
aactccttcctgaagacccctcagtttgcccatttttcagaggatatcatcttttccaag
aaatacaacaatgaagttgatgttgtggcctccaggatgttcttggtggcaaagacaatg
gaaaccaagagggaagaactttatgacctcctggagaccctgaggaagctctctctcacc
tccaaggtgaaattcatcgttttcaatccatcatttgtgtacatggatcgttatgcctct
tcagtgggagcccccttacaaaactcctgcattagtgctttatttctgctcttcttctct
gcattcctggtcgcagactctctgatcaatgtctggctcactctaactgttgcctcggtt
gaattcggagttataggttttatgaccttgtggaaagtggaactagattgtatttctgtg
ttgtgcttaatttacggaattaattatacaattgacaactgtgctccactgttatcaacc
tttgtcctgggcaaagagttcacaagaactaaatgggtgaaaaatgccctggaagtgcat
ggggtagctattttgcagagctacctctgctatattgttggtctgattcctcttgcagct
gtgccttcaaatctgacccgtacactgttcaggtgcttgtttttaatagcattagtcacc
ttctttcactgctttgccattttacctgtgatactgactttcctgccaccctccaagaag
aagagaaaagagaagaagaatcctgaaaaccgtgaggaaatagagtgtgttgaaatggtg
gatatggatagcacccgagtggttgaccaaattacaacagtctaa
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