Empidonax traillii (willow flycatcher): 114057706
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Entry
114057706 CDS
T05887
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114057706 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
etl04147
]
114057706 (COPB2)
Membrane trafficking [BR:
etl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
114057706 (COPB2)
Exosome [BR:
etl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
114057706 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
114057706
NCBI-ProteinID:
XP_027740145
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKNFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
KDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLADLRPAKEYPLVTPNEERNLLEEAK
GFEPSGVMVSQKKAEEPVPPPKQEVMKTVLQNSDTLPARDQKTLLDLEDDLDNLDLEDID
TTDINLDEEILDE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgactggatataaagcggaagctgacggctcgctccgaccgggtgaagagc
gtggacctgcaccccacggagccatggatgctggccagcctttacaatggcagtgtctgt
gtttggaaccacgaaacacagactctggtgaagaattttgaagtgtgtgacctgcctgtg
agagctgccaaattcgtggcgaggaagaactgggttgttactggagctgatgacatgcaa
atcagagtttttaactataacaccttggaaagggttcacatgtttgaggctcattctgat
tacatccgttgcattgctgtgcatcccacacagcccttcatactgaccagcagtgatgac
atgctgattaaactctgggactgggataaaaaatggtcttgttctcaggtgtttgaagga
cacacccattatgtcatgcagatcgtcataaacccgaaagacaataatcagtttgccagt
gcctctttggataggacaattaaggtgtggcagctgggatcatcctctcccaacttcacg
ttggaaggccacgagaaaggagtgaactgcatcgactattacagcggtggggacaagccc
tacctcatctccggcgctgacgaccggctggtgaaaatctgggactaccagaataaaacc
tgcgtgcagacactggaaggacatgctcagaacgtgtcatgtgtcagcttccatccggag
ctacccatcatcatcacgggctccgaggacggaaccgtccgcatttggcattccagcacc
taccgcctggagagcaccctgaactatggcatggagagggtgtggtgtgtggccagcttg
agaggctccaataacgtggctttgggatatgatgagggcagcatcattgtcaagcttggt
cgtgaagagcctgccatgtccatggatgcaaatggaaaaattatttgggctaaacattcc
gaagtccaacaggcaaacttgaaagccatgggagatgctgaaatcaaagatggagagaga
ttgcccctggctgtgaaggatatggggagctgtgaaatctatccccagaccattcagcac
aaccctaatggacggttcgtggtggtgtgtggtgatggggagtacattatctacacagcc
atggctctgagaaacaagagctttgggtctgctcaggagtttgtttgggcacacgattcc
tcagaatatgcaatcagggagagcaacagtgttgtaaagatatttaaaaatttcaaagag
aagaaatcgttcaaacccgattttggagcagaaggcatctatggtggctttctgctggga
gtcagatctgttaatggcctggcattctatgactgggagaacacagaactgatccgcaga
attgaaattcagcccaaacacattttctggtctgactcgggtgagcttgtgtgcattgct
acagaggagtcattcttcattctgaaatacctgtcagaaaaagtagcagcagcccaagaa
acacatgaaggtgtcactgaagatggaatcgaagatgccttcgaggttctcggtgagatt
caggagattgtgaaaacaggcttgtgggtgggtgactgcttcatttacaccagttctgtg
aacagactcaactactacgttggaggagagattgtcactattgcccatttggacagaaca
atgtatcttctggggtatatccccaaggacaaccggctttatttgggtgataaagagcta
aacattgttagttactcgttgctggtctcagtgcttgaatatcagactgctgtgatgaga
agagattttggtatggctgacaaagttcttcccacaattccaaaagaacagagaaccaga
gttgcacatttcctcgaaaaacagggcttcaaacaacaagctcttgcagtatctacagat
ccagagcatcgttttgaacttgctcttcagcttggagagttaaaaatagcgtatcagctt
gcagtggaagcagagtcagaacagaaatggaagcaacttgcagagcttgccattagtaaa
tgccagtttggcttagcccaggagtgtctccaccacgctcaagactatggagggctgctg
ctcctggccacagcctcaggaaatgccagcatggtgaacaagttagctgaaggagcagag
aaagatggcaagaataacgtggcatttatgagctacttcctgcagggaaagcttgattcc
tgtttggaactcctgataaaaaccgggcgtctcccagaagctgctttccttgcacggaca
tatttgccaagccaagtttccagggttgttaaactctggcgggaaaacctctctaaagtc
aatcaaaaagctgctgagtcccttgctgatcccacagaatatgagaaccttttccctgga
ttaaaggaagcttttgttgctgaagaatatgtgaagcaaagcctggctgacttgcggcca
gccaaggaatacccccttgtcactccaaatgaagaaagaaacttacttgaagaagcaaaa
ggatttgagccttctggagtaatggtgtctcagaagaaggctgaagaaccagttccccct
cctaaacaagaagtaatgaagacagttttgcagaattctgatacacttccagcaagagat
cagaagacactgctggacttagaagatgacttagataacttggatctggaggatattgat
accacagatatcaatctggatgaggagatcttagatgagtga
DBGET
integrated database retrieval system
