Empidonax traillii (willow flycatcher): 114057780
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Entry
114057780 CDS
T05887
Symbol
USP9X
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
etl01002
]
114057780 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114057780 (USP9X)
Enzymes [BR:
etl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114057780 (USP9X)
Peptidases and inhibitors [BR:
etl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114057780 (USP9X)
Ubiquitin system [BR:
etl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114057780 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
114057780
NCBI-ProteinID:
XP_027740309
LinkDB
All DBs
Position
Unknown
AA seq
2563 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQADAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHLYNGTRPSETVPAGVQLAEDELYARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGSALNVQIIAALIKPFGQCFEFLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GNDDIANRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGQVRRCILNRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDNTTVEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
MKTRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVEGTSTISPINQATHDQAVVLQN
ALQNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSVQLVFSS
NEEISKIYEKTNAGNEPDVEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGASRTVDFHLNQSTARERA
KHSGDYFTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEG
HLGVTKELLAFQTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAI
PVCSSPATINAGFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVG
PRPPKGFVGLKNAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNES
NVDPRDDVFGYPHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWK
QFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPH
RYECEESFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKL
PPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQIIQN
EQSENEHSGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKM
DDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDKDNELIKYIS
EIAITTKPHQIKMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQ
DHLLPEAEEITMISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAH
NVLFNVSNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNL
SLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVAL
DEGPGPPIKYQYAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLANPYGDPNLSQPIMA
LQQNVADILFVRTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYT
YELRPYLDLLLQILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKC
MVALFSNCPVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPIQSNE
TSNGYFLERSHSARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYPHSPGSQYQQN
NHVHGQPYTGPAAHHMNNPQRTGQRAQENYEGSEEVSPPQTKD
NT seq
7692 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccggtaggagggaatgatagccagggccaggctcct
gatggacagtcccagcctcccctccagcagaatcagacttcttcacctgattcttccaat
gagaactccccagctaccccacctgatgagcagggccaagctgatgctccaccccagctt
gaagatgaggagcctgcatttccacacacagacctggcaaagttggatgacatgatcaac
aggcctcgatgggttgttcctgtattgccgaagggggaattagaagttcttctagaagct
gctattgacctaagtaaaaaaggccttgatgtaaaaagtgaagcatgccagcgatttttt
cgagatgggttaacaatatccttcacaaaaatccttacagatgaggcagtgagcggctgg
aagtttgagattcatagatgtattattaacaacactcatcgactagtggaactatgtgtg
gccaagctgtcccaagattggtttccccttcttgaacttcttgccatggccttaaatcct
cactgcaaattccatctatacaatggtactcgtccctcagaaacagttcctgcaggggtc
cagctcgctgaagatgaactttatgcccgtcctcctgacccacgatcaccaaagggttgg
ctcgtagatcttatcaacaagtttggcacattaaatggatttcagatcttgcatgatcgc
ttcatgagtggatcagcattgaatgttcagatcattgcagctctcatcaagccatttgga
caatgttttgaatttctaacattacatacagtgaagaaatatttccttccaattatagaa
atggttccacaatttttagaaaatttaacagatgatgaactgaaaaaagaagcaaagaat
gaagccaaaaatgatgctctgtcaatgataatcaaatctctaaagaacttagcttcaaga
gttccaggacaagaagaaactgtaaaaaatttagaaatatttaggttaaaaatgatactt
aggttgttacaaatttcctctttcaatggtaaaatgaatgcactaaatgaagttaacaaa
gtaatatccagtgtgtcgtactacactcatcgacacgggaaccctgaagaggaggagtgg
ctcacagctgaaagaatggcagaatggatccagcagaacaatattttatcaattgttttg
agagatagtcttcatcaacctcagtacgtagagaagttagagaaaattctccgttttgtc
atcaaagagaaagccctcactttgcaggatctcgacaacatttgggctgcacaggcagga
aaacatgaagccattgtaaaaaatgtacatgatctcctcgcaaaattggcttgggatttc
tctcctgaacagcttgatcacctgtttgattgttttaaggcaagttggacgaatgcaagc
aagaaacagcgtgagaaactgcttgagttaattcgccgccttgcagaggatgacaaggat
ggtgtgatggcacacaaagtgctgaacctcttgtggaatttggctcacagtgatgatgta
ccagttgatatcatggaccaggctcttagtgcccatattaaaatcttagattacagctgt
tcacaggatcgagacacacaaaagatccagtggatagatcgttttatagaagaacttcgc
acaaacgataaatgggtcattcctgcactgaaacaaataagagaaatttgcagtttgttt
ggtgaagcaccacagaacttgagtcaaactcagcgaagtccccacgtgttttaccgacat
gacttaatcaatcaacttcagcacaatcacgccctggtgacactggttgcagaaaacctc
tctgcctacatggaaagtatgaggcagtatgctaaagagcacggggaatacgatcctcaa
actgtgagaccgggcagcaggtacagccacgtgcaggaagtgcaggagcgactgaacttc
ttacgatttttattgaaggatggtcagctgtggctctgtgcccctcaggcgaagcaaata
tggaagtgtttagctgaaaatgcggtttatctttgtgatcgcgaagcctgttttaaatgg
tattccaaactaatgggggatgaaccagacttagaccctgacattaataaggacttcttt
gaaaataatgtgcttcagctggatccttccctattaacagaaaatggaatgaaatgtttt
gaacgtttcttcaaagctgtgaactgtcgagaaggaaagctagtagcaaagagacgagcc
tatatgatggatgatctggagttaataggattagactacctttggagggttgtgattcag
ggaaatgacgacatcgccaacagagcaatagaccttctgaaagagatctatactaatctt
ggcccaaggttacaagttaatcaggtagtgattcatgaagacttcattcagtcctgtttc
gatcgtctaaaagcctcctatgatactttatgtgtgttggatggagataaggacagtata
aattgtgcaagacaagaagcaatacggatggtgagagtgttgactgttttaagagaatat
ataaatgaatgtgacagtgattaccacgaagagagaactattctacctatgtcaagagct
ttccgtggtaaacatatcaccctggtggttcgttttcccaaccaaggccggcaggtggaa
gatttggatatttggtcccacacaaacgacaccattggccaagtgcggcgttgcatcctc
aaccgcatcaaagccaacagtgcacacacaaaagtggagctgttcattggtggggagctg
gtggaccctgcagatgacagaaaactcattgggcagctgaacctcaaagacaaaacgcta
attacggctaagctcacacagataaattctaatatgccctcaagtccagatagttcttct
gactcttcaactggttctccgggcaaccacggcaaccactacagcgatgggccaaatcca
gaggttgaaagctgtttgcctggagtgatcatgtcactgcatcctcgatacatctctttt
ctttggcaagttgcagacctgggcagtagcctaaatatgccaccccttagagatggagct
cgtgttctaatgaagctcatgccaccagataacactacagttgagaagctcagagctatt
tgtttagatcacgcaaagcttggggaaagcagccttagtccatcccttgattcgctattc
tttggtccttctgcctcacaagtgctgtacctaacagaggtagtttatgccttgttaatg
cctgccagtgcacctctgggagaagatgccagtgacttccagtacaacttcttaaaaagc
ggtggtttgcctcttgtgttgagcatgctgaccagaaataacttcctgccaaatgcagat
atgaaaactcgaaggggtgcctaccttaacgctctgaaaatagccaaactgttgctcaca
gcaatcggatatggccacgttcgagctgtggcagaagcttgtcagccagtagtggaaggc
acaagtacaatttcaccgataaaccaggctactcatgaccaggcagtggtgctacaaaat
gccctacaaaacattcctaatccaacttcagagtgcatgctaagaaatgtagcaatacgg
cttgcccagcaaatatctgatgaggcttcaaaatacatccctgatatctgtgttatcagg
gcagtacagaaaatcgtttgggcgtcaggctgtgggtcagttcagctggtgttcagctcg
aatgaggaaatcagtaaaatctatgaaaagacgaacgcaggaaatgaaccagacgtggaa
gatgaacaagtttgctgtgaagcactggaggtgatgaccctgtgttttgctttgattcca
acggcactggatgcactcagtaaagaaaaggcctggcagacgtttatcattgatttactg
ctgcactgccacagcaagactgttcgtcagatggcacaggagcagttctttttaatggct
accaggtgttgcatgggacagagacctctccttttcttcattaccctgctgttcactgtt
ctaggggcaagcagaacagttgatttccatttgaaccagagtactgcaagagagagagct
aagcattctggagactacttcactctcctaagacatctgctaaactatgcttacaacagt
aacattaatgtacccaacgctgaagttctcctcaataatgaaattgactggcttaagagg
attagggatgaagtaaaaagaacaggggaaacaggtgttgaagaaactattttagagggt
caccttggagtaacaaaagagttgttagcattccagacacctgagaagaaataccatatt
ggttgtgaaaaaggaggtgctaatctcattaaggagttgatagatgatttcatcttccca
gcatccaatgtttacctgcagtacatgagaaatggagaattgcctgctgagcaggccata
ccagtctgtagttcaccagctactattaatgctggctttgagctccttgttgcactagca
gttggatgtgtgcgaaatctcaaacagatagtagacactctgactgaaatgtattacata
ggtacagcaatcactacttgtgaagctcttacagaatgggagtatctgccacctgttggg
cctcgaccaccaaagggatttgtagggctaaaaaatgctggtgccacttgttacatgaat
tctgtcattcagcagctgtacatgattccagccatcaggaatgggattcttgccatagaa
ggcacaggcagtgatgtagatgatgacatgtctggggatgaaaagcaggacaacgagagc
aatgttgacccacgagatgatgtgtttgggtacccacatcagtatgaagacaaaccagcg
ttgagtaaaacagaagatagaaaagagtacaatattggagttttgaggcatctccaagta
atttttggtcatttagcagcttccaggctacagtactatgtaccaagagggttttggaaa
caatttagactttggggtgaacctgtaaatctacgtgaacaacacgatgctttagaattt
tttaattccttggtggacagtttagatgaagctttaaaagctttgggccatccagcaatg
ttaagtaaagttttaggagggtcctttgctgaccagaagatttgtcaaggatgcccacat
aggtatgaatgtgaggaatccttcacaactctgaatgtagatataagaaatcaccaaaac
cttcttgattctttggaacagtatgtcaaaggagacttattggaaggtgcaaatgcatat
cattgtgagaaatgcaacaaaaaggttgatacagtgaaacgcttgttgattaagaagttg
cctccagttcttgccatccagttgaaacgatttgattatgactgggaaagggaatgtgca
atcaaattcaatgattattttgaatttccacgagaactggacatggagccttacacggtg
gcaggtgtagcaaaattggagggggacgacgtgaatcctgaaaatcagataatacaaaat
gagcagtcggaaaacgaacactctgggagcacaaagtacaggcttgtgggtgtgctggtg
cacagcggccaggccagtggtggacattactactcctacatcatccagaggaacggggga
gacggggagaagaaccggtggtataaattcgatgatggagacgtgacagagtgtaaaatg
gatgacgatgaagaaatgaaaaaccagtgttttggtggagaatacatgggagaagtgttt
gatcacatgatgaagcgcatgtcctacagacgccagaagaggtggtggaacgcttacatt
cttttttatgaacgtatggacacaatagacaaagacaatgaactaataaaatatatttca
gaaatagctatcaccactaaaccccatcagattaaaatgccatcagccatcgagcgaagc
gtgaggaagcagaacgtgcagttcatgcacaatcggatgcagtacagcctggaatatttc
cagttcataaagaagttgcttacttgtaatagtgtctacctgaatcctcctccaggacaa
gatcatctgttgcctgaagcagaagaaataactatgattagtattcagcttgctgctaga
tttctcttcaccacaggatttcatacaaagaaaatagtccgtggccctgctagtgattgg
tatgatgcattgtgcatcctccttcgtcacagcaagaatgttcgcttttggtttgcacac
aacgtccttttcaacgtctccaaccgcttctcggagtaccttctggaatgccccagtgca
gaagtgaggggtgcatttgcaaaacttatagtatttattgcacatttttcattgcaagac
ggaccatgtccatcaccttttgcctctcctggaccttccagtcaggcttatgataactta
agtttaagcgatcacttactgagggcggtactaaatctgctaagaagggaagtgtctgaa
cacgggcgccacttgcagcagtatttcaacctgtttgtgatgtatgccaatctaggtgta
gcagagaagacacaacttctgaaactaaatgttcctgcaaccttcatgcttgtggctctg
gatgaaggtccaggcccccccattaagtaccagtatgctgagctggggaagctgtacacg
gtcgtgtcgcagctcatccgttgctgcaacgtctcatcgaggatgcaatcctccatcaac
ggtaatcccccacttgccaacccttatggtgatcctaatttatctcagcctataatggca
cttcagcagaacgtagcagacattctgtttgtgagaactagttatgtgaagaaaattatt
gaagattgcagcaactctgaagagaccatcaagttgcttcgtttctgctgttgggagaat
cctcagttctcttccacagtcctcagtgaactactttggcaggttgcatattcatataca
tacgagcttcgaccttatttggatctgcttctgcaaatcctgctaattgaggactcttgg
caaactcacaggattcacaatgcacttaagggaatcccagatgacagggatggactgttt
gacaccattcagcgctcgaagaatcattatcagaaaagagcttaccagtgtataaagtgc
atggtagctctcttcagcaactgtcctgtagcttaccagatccttcagagcaatggagat
ctgaagagaaaatggacctgggcagtagaatggcttggagatgagcttgagcgtagacct
tacactggcaatccccagtacacctacaataattggtctccaccaatacagagcaatgaa
acatcaaatggctacttcctagagaggtcacacagtgctagaatgactcttgcaaaggct
tgtgagctctgcccagaggaggaaccagatgatcctgatgccccagatgaacatgagtct
tctccacctgaagatgccccactgtatccccattcacctggttcccagtatcaacagaat
aaccacgtgcatggacagccatatacgggcccggcagcacatcatatgaacaaccctcag
cgaactggccaacgagcacaagaaaactacgaaggcagtgaagaagtttccccgcctcag
acaaaagattag
DBGET
integrated database retrieval system
