Empidonax traillii (willow flycatcher): 114057806
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Entry
114057806 CDS
T05887
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etl03021
]
114057806 (CTR9)
Transcription machinery [BR:
etl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
114057806 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_6
TPR_7
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
114057806
NCBI-ProteinID:
XP_027740315
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPISRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKADEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHARNSNSDSEEGEQQQHSKRIVSDSDSDNRNKSGSEAGSPRRASVRAS
EEESDSDRSPRKRRRSESEQSDNESVQSGRSRGSGGSDNESRPASRSAESDRESERASDN
EGSARGSGNESEPEGSNEEGSEGGSDDSD
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagatcccgctccgggacaccgacgaggttatcgagcttgac
ttcgatcagttgcctgagggtgatgaagtgataagtatcctgaaacaggagcacacccag
ctgcacatatggattgccttagcgctggaatactacaagcaagggaagacagaagacttc
gtgaagctgttggaagctgcacgcatagatggcaacttggactacagagaccacgagaag
gatcagatgacatgtctggacaccctggcagcctactatgtgcaacaggctcggaaggag
aagaacaaagacaacaagaaggagctcattacacaggctaccttgctgtacactatggct
gacaaaatcatcatgtacgatcagaatcacttgttgggaagagcctgcttttgtctgctt
gaaggtgataagatggaccaagctgatgcacagttccactttgtgctcaaccagtctcca
aataatattcctgcccttctcggtaaagcatgcatttctttcaacaagaaagattacaga
ggagcccttgcctactacaagaaggcactgcgtaccaatccaggttgcccagccgaggtc
cgcttagggatgggccactgcttcgtgaagctgaacaagctggagaaagctcgcttggcc
ttcagcagggccctggagctcaactccaagtgcgtgggggccttggtgggactggctgtt
ctggaactcaataacaaggaggctgattccatcaagaatggtgttcaactcctctccagg
gcttacacaattgaccccagtaatccaatggtgctgaatcacttggctaatcacttcttt
ttcaagaaggactatggtaaagtacagcacttggctcttcatgccttccataatacagaa
gtggaagcaatgcaggcagagagctgttatcagctggcaagatcttttcatgttcaggaa
gattatgatcaagctttccagtattattaccaggccactcagtttgcctcctcttctttt
gtacttccgttttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgca
tcccagtgctttgaaaaagttttgaaagcctatcctaacaattatgagactatgaaaatc
cttggatctctttatgcggcttcagaagaccaggagaaacgggatattgcgaagggacat
ttaaagaaagtcacagaacagtatcctgatgatgtagaggcatggattgaactagcccag
attctagaacagactgatatacagggtgccctgtcagcctatggaacagccactcgcatt
ctgcaagagaaagtgcaggctgatgtcccaccagagatcctgaataacgtgggtgctctg
cacttcaggctgggcaacctcggagaagcgaagaaatactttctggcgtccctggatcgt
gcgaaggcagaagcagagcatgacgagcattactacaatgccatctccgtgacaacctcc
tataacctggccaggctctatgaggccatgtgtgaattccacgaggcggaaaagctgtac
aaaaacattttaagagaacatcctaattacgttgattgctacttgcgcttgggagctatg
gccagggataaaggaaatttctatgaggcttctgattggtttaaagaagcacttcaaata
aatcaggaccatccggacgcttggtctctgattggcaacctccatttggctaaacaagag
tggggtccaggacagaagaaatttgaaagaatattgaaacagccctccacacaaaatgat
acttattccatgctggctcttggcaatgtctggttgcagactcttcatcaacccacaaga
gacagagaaaaggagaaacgtcatcaagaccgtgcattagcgatctacaagcaagtgctc
agaaatgatccaaagaatttatatgctgctaatggcataggagctgtcttggcacacaaa
ggatatttccgtgaagctcgtgatgtgtttgcccaagtgagagaggcgacagcagatatc
agtgatgtgtggctgaatctggcacatatctacgtggagcagaaacagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcaccaaaataccgaagtcttg
ttatatttggcccgggcgctcttcaaatgtggcaaattacaggaatgcaaacaaaccttg
ttaaaggccaggcacgtagccccaagtgatactgtcctgatgtttaacgtggctttagtg
ctgcagagactggctacctctgtcctgaaagatgagaagagcaatctgaaggaagtgctg
aacgctgtgaaagaactggagcttgcccacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcccttgctgctacagaagccaggcagtgctcggactta
ctgagccaggcgcagtaccacgtggctcgggcgcgcaagcaggatgaggaggagagggag
ctgcgtgcaaaacaggagcaagagaaggagctgcttcgccaaaaactgcttaaagagcag
gaagagaagcgcctaagagaaaaagaagaacagaagaaacttctggaacaaagagctcag
tatgtggagaaaaccaagaatattctgatgttcactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggcggtggaggcaggcgttccaaaaaaggagcaggggaatttgatgag
tttgtcaacgatgacagtgatgaagatctacccatatctaggaagaaaaagaagaggaag
ggtagtggcagcgaacaagatggggaagaagaggagggtgagagaaagaagaagaaaagg
aggaggccccagaaggcagatgaggggagcgatgatgaagaacacgaaaatggcccacga
cctaaaaaacgccgtccacccaaagcagagaagaagaaagctcccaaaccagaacgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgatgattct
tctgatgaggataaactcaagattgctgatgatggacatgctcgaaatagcaacagtgat
tcagaggagggggagcagcagcagcacagcaagcgcattgtttctgacagtgattccgac
aacaggaacaagtctggcagcgaggcaggcagtcccaggagggccagtgtccgtgcctcc
gaggaagagtctgacagtgacaggtctcccaggaagaggaggcggtcggagtcggagcag
tctgacaacgagtcggtgcagtcagggaggagtcgcggctcggggggctccgacaacgaa
tcccgcccggcttctcgcagcgctgagtccgacagggagtctgagagagcctctgacaac
gagggttctgccagaggatccggtaacgagtctgaaccagagggatccaatgaggagggg
tctgaaggtggttcagatgacagtgattag
DBGET
integrated database retrieval system
