Empidonax traillii (willow flycatcher): 114057924 Help Entry 114057924         CDS       T05887                                  Symbol COL7A1 Name (RefSeq) collagen alpha-1(VII) chain   KO K16628   collagen type VII alpha Organism etl  Empidonax traillii (willow flycatcher) Pathway etl04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:etl00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     114057924 (COL7A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen fn3 VWA Kunitz_BPTI VWA_2 Pur_ac_phosph_N Fndc10 DUF1194 YjeF_N Motif Other DBs NCBI-GeneID:  114057924 NCBI-ProteinID:  XP_027740556 LinkDB All DBs Position Unknown AA seq 2934 aa AA seqDB search MSGQLLFLAVLPVLLGPLPAMAQKRSQAVCEDVLEADIAFLVDGSSSIGRNNFRTVRTFM DDLVAPFVQVVGEKAVRFAVAQYSDDPRVEFTFSQHTDGASVRRAIQQLSYKGGNTRTGA GFRYVADNFFGPTQLRPGVPQICILITDGKSQDDAEGPAAKLKSQGVKIFAVGVKNADHK ELVRVASTPTDAFFSYVGDFKLLSTLVPLMTRRVCTSVGGTLRLLDGQSHTGPSNLEILE RGFDQLRIRWTAASGPVTGYRVQHVPLTGLGQPIMAERQEVSLGPREMSTVLRGLRVGTE YLVTVTAQYANSIGESVSSRVRTQSRAGSMLDFRVVETGATFLRLAWQPGPELPQGYSLS YTMQGAAQGEEKSLGASAQSATLSNLRPDTEYVVVLRPRYAQQPAVPATLTARTRHPVGV QHLAVHNISAQSMLLTWQPVSGATGYRLSWATLAGQDRHRVDLDAGRTSHALVGLQPNTD YVVTVAPLFGELEGPTTTVRQRTEAGTDQTLQTNILGPTSIQVLWTSARDARGYRLEWKR ATGPEPPRTVSLPSSTNTYQLTGLKPGTEYRITLYTLYDGGEVATPVTTFQTGVEGPVGA VSDLRLVEESGRWVRLSWTSVPGATEYKVVVRNSQDGTERTRRIPGSQTGLELGDLREGI TYLVRVSALAGSREGSAATLPIRLKYPAVGSISELRVTEASPSQLRVTWRGLPGAGGYLL TWRGSDGVKQSRFLPADPTIFTIEGLRAGIVYTVGVSAIMDGREGSPVTATGRIAPEQVG TVTQLEVQASRSNVARVTWVGVPGATAYRVVWSRRDGGSENSRRVPGHTNSFDIPDLEGG VSYTVKVTALIGNREGNPVSIVVTTPEAVPLPLVSGFQVTEASETRLRLAWLPAAGSTGY RLVWRLAEGGPQRSQQLPATSRSYDLAGLEPGRRYHISITSLVGSRESEPATVTAITATP GHITSLRVTDVRRDSVTLTWTPVPGASGYILSWSPPAAGGERGRTLPGAASSQQVSGLRL GQLYTFTLRPLLGSAPGAETSVSERTVCRDARGDVVFLVHGTRDSSSGADTVRTLLSNTV SALGRLGPEGTQVALATYSYRSLPWLLLNRSSDLPAVLEQIRTMRYEEPSGNAIGAAITF ARTYLLSPGAGRRPSVPAVLVVLADGPSGDDAIAAARDVKAGGVQVLAVGLEGADREQLR SMVTSEDPRYIYHGDSLTELEGELTDDLCTIISTRPEPELKPKPCTVQCPKGEKGDRGET GPRGPMGLSGLKGEKGEPGEPRVITDGEQGLPGRRGEPGVPGRPGPPGIPGPRGPLGDPG PPGPVGPMGPPGPPGEFVKGEKGDRGERGPPGLVDGAAPRGEPGPPGLPGDPGPRGPAGP PGLKGEKGDGTEGFPGSPGRPGDPGDRGPRGPPGEQGRKGDRGAPGELGEMGEKGDRGVP GPEGEKGETGAPGRPGPSGREGAPGPAGPRGEKGDPGPPGKPAPIVAGVGGEKGDRGFPG PEGPPGPKGDTGDKGARGAPGLSIPGPAGPKGEQGDRGNVGLTGRSGPKGDPGEPGEKGE PGRAGTPGQTGVRGKEGEAGPPGKPGDRGPRGLPGYRGLPGEKGDPGDPGPEGRNGSPGA PGNKGDRGEPGPAGPPGRTVDVGLGGVGEKGEKGDPGDPGEDGAKGARGDAGSPGLPGER GLEGPRGSPGARGDPGDRGPPGEKGDRGPPGLDGRNGLEGKPGPPGPAGLRGDPGKQGDP GRDGLPGLRGEQGPPGPVGPLGPPGIPGKPGEDGKPGLNGKNGEDGTPGEDGRKGDKGDM GPPGREGRSGAKGEQGDRGVPGPLGPPGLPGVPGQVGPPGQGSPGLRGVAGPKGDPGEPG LQGEPGRPGSPGVRGDPGTAVNVERSLEALGIKVSSLKELTGAYDGSSDSFLPVSERLRG QKGSRGDPGERGPPGREGSLGFPGERGPKGDKGDPGTPGPQGPMGRAVGERGPEGPPGQA GEPGKPGIPGVPGRAGELGEPGRPGEKGDRGEKGDRGEQGRDGLPGPQGPPGPKVDVAEG SLMGFPGERGPVGPKGAKGEPGVEGERGPKGDKGEGGLRGDRGEPGEKGRDGAPGLPGER GLAGPEGKPGLPGFPGVLGRPGNQGDPGPPGPPGSTGPPGTQGPAGTKGDPGEPGSGIRG LPGPQGSMGLPGPPGPPGPGGPPGVPGQPGQVGESGKPGVPGRDGVPGKDGEAGMPGKMG MPGPSGPAGPKGEPGDAGAPGQAITGPPGPKGEKGEPALLEGVLGEPGSKGDRGLPGPKG EKGEPGRFGEPGDPGEDGAKGSSGAKGEKGSPGVGARGPPGQDGPPGLKGDTGLPGLPGP PGLAGIAGTPGQPGLRGDNGQPGPPGPPGERGLIGFPGRDGTAGPPGPVGPPGPAGIQGA PGVKGDKGAPGAGLPGARGERGDPGPRGEDGRPGPEGDRGPVGLPGNRGERGDKGDLGAP GPKGDKGDTVVVEGPPGARGSKGEPGDRGLKGTEGDKGDKGEQGMPGEKGMRGEQGEKGS TGFPGARGPGGQKGEVGALGEPGEPGQPGRDGIPGARGEKGDMGPIGMRGLKGDRGMKGA CGLNGEKGEKGDPGIPGRSGLSGRKGEPGELGLSGPPGIPGKEGLMGPKGDRGFDGQQGA KGDQGEKGDRGAPGIIGGPGPRGSDGAPGPPGPPGSIGPRGPEGMQGQKGERGPPGQSVP GARGVPGIPGERGEQGSPGTRGLRGEKGEPGMTEDEIRAFVRQEMSQHCACGGHFPRHLD SREHSGGWGAQARSSFRSAQGGGRIVRQEREHGQTEPFPAGSAHTVPVLKLSHTEEEEGQ DREINLDTDDLEYDSMYDDEEEFDGAPEMDSSEQPAMDAEPCSLPLDEGHCQHYTLRWYY NQRVTECRPFVYSGCQGNLNRFDSKEECELHCRQHPGAGARDVASGKTGGQPKV NT seq 8805 nt NT seq  +upstreamnt  +downstreamnt atgagtggccagctcctgttcctggctgtgctccctgtgctcctgggtcccctgcctgcc atggcgcagaagaggagccaagccgtgtgtgaggatgtgctggaggctgacatcgccttc ctggtggacggctcgtccagcatcggcaggaacaacttccgcaccgtccgcaccttcatg gatgacctcgtggcgcccttcgtgcaggtggtgggtgagaaggcggtgcgcttcgccgtg gcacagtacagcgatgacccacgggtggagttcaccttctcccagcacactgacggtgca agtgtccggagggccatccagcagctgagctacaagggcggcaacacgcggactggtgct ggcttccgctatgttgctgacaacttctttggccccacacagctccggcctggggtgccc cagatctgcatcctcatcacagatggcaagtcccaggatgatgccgaggggccggcagca aagctgaagagtcagggtgtcaagatctttgcagtgggggttaagaacgctgaccacaag gagctcgttcgtgtggcctcaacgcctactgatgccttcttctcctacgttggtgacttc aagctgctgagcacactggtgccgctgatgacacgcagagtgtgcacgagtgtcgggggt accctgcgcctgctggatgggcaaagccatactggcccttccaacctagagatcctggag cggggctttgaccagctgcggatccgctggacggcagccagtggccctgtcacaggctac cgggtccaacatgtgccgctgacagggctggggcagccgatcatggcagagaggcaggag gtgagcctggggccacgggagatgagcactgtgctgcggggactgcgtgtggggacggag tacctggtcactgtcactgcccagtatgccaacagcatcggcgagtcagtgtccagccga gtacggacccaaagccgtgctggctccatgctggattttcgcgtggtggagaccggagca accttcctgcggctggcctggcagcctggccctgagctcccccagggctacagcctcagc tacaccatgcaaggagcagcccagggggaggagaagagcctgggggccagtgcacaatca gccacactcagcaacctgcgccccgacacggaatacgtggtggtgctccgaccccgctac gcacagcagcctgctgtccctgccaccctcaccgcccggacacggcatccagtgggtgtg cagcacttggctgtccacaacatctcagcacagagcatgctgctgacctggcagcctgtc agcggtgccactggctaccggctgtcctgggcgaccctcgcagggcaggacaggcacagg gtggacctggatgctgggcgaacgtcacacgcactcgtggggctgcagcccaataccgac tacgtggtgacggtggccccgctcttcggggagctggaggggcccacaaccaccgtgcgg cagaggacagaggcaggtacggaccagacgctgcagaccaacatcctgggtcccacatcc atccaggtgctctggaccagtgcccgtgatgcccgtggctaccgtctagagtggaagaga gccacaggaccagagccccctagaacggtgtctctccccagcagcaccaatacttaccag ctgactgggctgaagccaggcaccgagtaccgcatcaccctctacacgctctatgatggt ggggaggtggccacccctgtcaccaccttccagacaggtgtggaggggcccgtgggtgct gtgtcagacctgcggcttgtggaggaatcgggcaggtgggtgcgactgagctggaccagt gtccctggtgccaccgagtacaaagtggtggtgcgcaacagccaggacggcacggagagg acgaggcgcatcccaggcagccagacagggctggaactgggtgatctccgggagggcatc acctacctcgtgcgtgtctcagcgctggcaggcagccgggagggcagtgctgccacactc cccatccgtctcaagtacccagctgtgggcagcatctcggagttgagggtgacggaggcc agtcccagccagctgcgggtcacctggcgagggctaccaggtgctgggggatacctgctg acgtggcgaggcagcgatggtgtgaagcaatcccgcttcctccctgccgatcccaccatc ttcaccatcgaggggctgcgtgctggcatcgtctacaccgtcggtgtctcggctatcatg gatggccgcgagggcagccctgtcactgccacaggacggatagcacctgagcaggtgggg acagtgacccagctggaggtgcaggcatccaggagcaacgttgcccgtgtcacctgggtt ggtgtgccaggagccaccgcctaccgcgtggtgtggagccgtagggacgggggctctgag aatagccggcgagttcctggacacaccaactcctttgacatccccgacctggagggaggt gtctcctacactgtgaaggtgacggcactgatcggcaaccgggagggcaaccccgtctcc attgtcgttaccaccccggaggcagtcccactgccccttgtcagtggcttccaggtgacg gaagcctcggagacccgcctgcgcctggcctggttgccggcagctggcagcactgggtac cgcctggtctggcgcctggctgaaggggggccccagcgcagccagcaactcccagccacc tccagatcctatgacctggcggggctggagccgggccggcgctaccacatcagcatcacc agcctggtcggtagccgagagagcgagccagccactgtcactgccatcactgccacccca ggccacatcaccagcctgcgagtgacagacgtgcggagagattcagtgacactcacctgg accccagtccctggtgcctctggctacatcctttcctggagccctcctgcagccggtggg gagagggggcggacgctgcccggcgctgccagctcccagcaggtctccgggctgcgtctg ggccagctctacaccttcaccctccgcccgctcctggggagtgcccccggcgctgagaca tccgtcagcgagcgcacagtctgcagggatgcccgcggtgatgttgtctttctggtgcat ggcacccgtgacagctcctcgggtgccgacactgtccgcaccctcctctccaacactgtg tccgccctggggcgcctgggccctgagggcacccaggtggctctggccacatacagctac cgcagcctgccctggctgctcctcaaccgctccagcgacctgcccgccgtgctggaacag atccgcaccatgcgctacgaggagcccagcggcaatgccatcggggcagccattaccttt gccaggacctacctgctgagccctggcgcagggcgccggcccagtgtaccagcggtgctg gtggtcctggctgacggcccctctggggacgatgccatcgctgcagccagggacgtcaag gctgggggggtgcaggtgctggcggtgggcttggagggggcagaccgggagcagctccgg agcatggtcaccagtgaggacccgcggtacatctaccatggagacagcctgacagaactg gagggagagctcactgatgacctctgcaccatcatctccaccaggccagagccagaactg aaaccgaagccctgcactgtgcagtgccccaagggtgagaagggagatcgcggcgagaca ggaccacgggggccaatgggactttctggcctaaagggggagaaaggtgaaccgggagag cccagggtgatcacagacggagaacaggggctgccgggccggagaggggagccaggtgtg ccgggcagacctggcccccctgggatccccggcccacggggaccccttggtgatccaggc ccccctggtccagttggacccatggggccaccaggacctccaggagagtttgtgaaggga gaaaagggtgaccgaggggaaaggggcccccctggactcgtggatggggcagcacctcga ggggagcctggacccccgggcctgcctggggaccccgggccccggggacctgccgggccc cctggcctgaagggagagaagggtgatggcacagaaggtttcccagggtctcctggccgc cccggggacccaggagatcggggccctcgaggaccaccaggggagcagggcaggaaggga gaccgtggggcaccaggagagctgggagagatgggagagaagggggaccgtggtgtgcca ggccctgagggtgagaagggtgagacaggagccccggggcgcccagggccatcaggcaga gagggagctccaggaccggctggcccccggggagagaagggcgatccaggaccacctggc aagccagctcctatcgtggctggtgttggaggagagaagggtgacagaggattcccagga ccagaaggacctcctggccccaagggtgatacaggagataaaggtgcccgtggtgcccct ggcctgagcatcccgggaccagctggtcccaaaggcgagcagggcgatcggggtaatgtt ggcctcacaggcaggagtggcccaaagggtgacccgggggagccaggggagaagggggaa ccgggccgagcaggcactccagggcagactggggtgcgaggcaaggagggtgaagcaggt ccgcctggcaaacctggagacaggggtccccggggcctccctggctaccgaggcctccct ggggagaagggtgacccaggtgacccaggtcctgaaggcaggaatggcagccctggagca ccagggaacaagggtgaccgtggggagccggggcctgctggacctccaggacgaaccgtg gacgtggggctcggaggagtgggggaaaagggtgagaagggggaccccggggaccccggc gaggatggtgcgaagggcgcccggggcgatgccggctcccctggcctgcctggagagagg ggtttggagggtccccgtggttcccctggtgctcggggtgatcctggggaccgaggccct ccaggagagaagggagaccgtggcccaccaggtctggatggccgcaatgggctggaaggc aaacctgggccaccgggccctgctgggctgcggggggacccgggcaagcagggggaccct ggccgggatgggctgcctgggctgcgtggggagcagggaccgcctggccctgttggccca ctgggaccacctggcatccctggcaaacctggtgaggatggcaaacccggcctcaacggc aagaatggagaagatggaacaccaggagaggatgggagaaagggagacaaaggtgatatg ggaccacctggtagagagggccgcagtggtgccaagggtgagcagggggacagaggtgtg ccaggccctcttggcccccctggcctccccggtgtcccagggcaggtcggccccccaggc cagggctccccaggcctccgtggggtggctggaccaaagggggacccaggggagcccgga ctgcaaggagagcccgggcgacctggcagccctggagtacgtggagaccctgggactgca gtgaatgttgagcgtagcctggaagctcttggcatcaaggtttcatccctgaaggagctc acgggtgcctatgatgggagctcagactcatttctgccagtgtccgagcggctgcggggc cagaagggcagtcggggggatccaggggagaggggtcccccaggccgagagggctcttta ggcttccctggcgaacgaggacccaaaggtgacaagggggacccaggcacccctggcccc cagggccccatgggccgggccgtgggtgagcggggtcccgagggcccgcctgggcaggct ggggagcctggcaagccaggcattcccggggtgccaggccgggctggggagctgggggaa cccgggcggcctggtgagaagggcgaccggggtgagaagggcgaccgaggtgagcagggc agggatggcttgcccggaccccaaggacccccaggacccaaggtggacgtggcggagggc agcctcatgggcttccctggcgagcgcggccctgttggacccaagggagcgaagggtgag cctggagtcgagggtgagcggggacccaaaggagataagggtgaaggtggcttgcggggt gaccgaggggagcctggcgagaagggcagggatggtgccccgggtcttcctggtgagaga gggctggctggccccgaagggaagccgggcttgccaggcttccctggagtgctgggacgc ccgggcaaccagggagacccaggacccccaggacctccgggcagcactggcccaccaggg acccagggcccagctgggaccaagggtgatccaggggagcctggctctggcatccgtggc ttgcctggtccccagggcagcatggggctgccagggccccctggcccccctggtccaggg ggcccaccgggtgtccccgggcaaccaggacaagtgggggagagtgggaagccgggtgtg ccaggcagggatggtgtgccagggaaggacggcgaggcgggcatgcctgggaagatgggc atgccagggccttcgggccctgccggtcccaagggagagccaggggatgctggagcccca gggcaggccatcactggcccccccggccccaaaggcgagaagggagagccggcgctgctg gagggtgtgctgggagagcctggctccaagggtgacagaggcttgccaggccctaagggc gagaagggggagccaggacgattcggggagccaggagatcctggggaagatggagccaag gggtcttctggagccaaaggggagaagggatcaccaggtgtcggtgcacggggaccgcca ggacaggatgggcctccaggtttgaagggggacactggcttaccaggattaccaggaccc ccaggcttagcaggcattgctgggacaccaggacagccaggcctgagaggggacaatggg cagcctggccctccaggtcccccaggagagaggggtttgatcggctttccaggcagagat ggcactgctggaccaccaggacctgtgggaccaccaggaccggctggcatacaaggggcc cctggcgtgaagggtgataagggcgctccaggagctgggctgccaggagccagaggcgag cgtggagacccggggccacggggtgaagacggtcgcccagggccagaaggggatcgtggg ccagtgggcttgcctgggaaccggggggagcgtggggacaagggggaccttggggcccca ggacctaaaggagacaagggagatactgtggtggtagaggggccgcctggagcacggggc agcaaaggggaaccgggagaccgaggcctgaagggcacagaaggggacaagggggacaag ggggagcaaggcatgcctggagagaaggggatgaggggtgagcaaggcgagaagggctcc acaggcttccctggggcacgcggccctggcgggcagaagggagaggttggagcgttggga gagcctggtgagccgggtcagcctggccgtgacgggatccctggagctcggggagagaag ggggacatgggacccataggcatgcgaggcctcaagggtgaccggggcatgaaaggtgcc tgtggcctcaatggggagaagggtgagaagggggatccagggatcccggggcgctcaggg ctgtcagggaggaaaggggagccgggagagctgggtctgtcgggaccaccgggcatcccc gggaaggaagggctcatgggacccaagggcgaccggggatttgatgggcagcagggagcc aaaggagatcagggggagaaaggagaccggggcgcccctggcattatcggtggccctggt ccccggggtagtgatggtgctcctggcccccctggacctccagggagcattggcccacga ggtcctgagggcatgcaaggccagaagggggagagaggcccccctggacagtcagtgccg ggtgcacgcggcgttcctggcatccccggtgagagaggagagcagggcagtcccggcacc cgtgggctccgtggggagaagggggagccaggcatgacggaggatgagatccgtgccttc gtcaggcaggagatgagccagcactgtgcctgcggtggccacttcccacggcacctggat tcacgtgagcattcaggaggctggggggctcaggccaggagcagcttccgctctgcccag ggaggaggaagaatcgttcgccaggagagggagcatggccaaacagagccattccctgct ggcagcgctcacacagtccctgtgctcaagttgtcacacactgaagaggaggaggggcag gacagggagatcaacctcgacacagatgaccttgagtatgacagcatgtatgatgatgag gaggaatttgatggggccccggagatggacagctcagagcaacctgcaatggatgctgag ccctgcagcctgcctctggacgaggggcactgccagcactacaccctgcgctggtactac aaccaaagagtcacggagtgccggccctttgtctacagcggctgccagggcaacctcaac cgcttcgacagcaaggaggagtgtgagctgcactgcaggcagcacccaggggcaggtgcc cgtgatgttgccagtggcaagacaggagggcagccaaaggtgtag

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