Empidonax traillii (willow flycatcher): 114057986
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Entry
114057986 CDS
T05887
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
etl00535
]
114057986 (COL14A1)
Proteoglycans [BR:
etl00535
]
Extracellular matrix (ECM) proteoglycans
Others
114057986 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_VIN3
VWA_3
Motif
Other DBs
NCBI-GeneID:
114057986
NCBI-ProteinID:
XP_027740719
LinkDB
All DBs
Position
Unknown
AA seq
1886 aa
AA seq
DB search
MLCRYEMQSCFLLAFLAVTAFFISDAQGQVSPPTRLRYNVVSPDSVQISWKAPKGQFTGY
KLLVTPSSGGKTNQLILQNTATKAIIQGLIPDQNYALQIIAFNEDKESKPAQGQFRIKDI
ERRKETNKPKVKDPEKTNASKPAPEGSLFTCKTPAIADIVILVDGSWSIGRFNFRLVRLF
LENLVSAFNVGSEKTRVGLAQYSGDPRIEWHLNAYGTKDAVLDAVRNLPYKGGNTLTGLA
LTYILENSFKPEAGARPGVSKIGILITDGKSQDDVIPPAKNLRDAGIELFAIGVKNADIN
ELKEIASEPDSTHVYNVADFNFMHTIVEGLTRTVCSRVEEQEKEIKGTITSLGTPSDLVT
SEVTARGFRVSWTHAPGKVEKYRVVYYPTRGGPPEEVVVDGSVSTAVLKNLMSLTEYQIA
VFAIYSNAASEGLRGTETTLALPMASDLQLYDVSQSSMRVKWNGVAGATGYMILYAPLTE
GLAADEKEIKIGEASTDLELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLPLSPPANL
RFSDVGHNSAKLTWDPASKNVNGYRIMYVKTDGTETNEVEVGRVSTHTLKSLAPLTEYTV
AIFSLYDEGQSEPLTGSFTTKRVPAPQHLEIDEASTDSFRVSWKPTSSNIAFYRLAWIPL
DGGESEEVVINGDADSHVIEGLLPDTEYEVSLLAVFDDETESEVVAVLGATFASSTTVPS
TVTTTSATTSEPTTAVFRTGIRNLVIDDETTSSLRVTWDISDYSVQQFRVTYLTAKGDRS
EEAVRMVMVPGRQNTLLLHPLLSDTEYKVTITPIYADGEGVSVSAPGKTLPLSAPRNLRV
SDEWYNRLRISWDAPPSTTMGYRVVYKPINIPGPALETFVGDDINTILILNLFSGTEYSV
KVFASYSTGFSDALTGVAKTLYLGVTNLDSYQVRMTSLCAQWQLHRHATAYRVVIESLVD
GKKREVNLGGGTPRHCFFELMPGTEYKISVHTQLQEIEGPAVSIMETTLPLPTQPPTTPS
TPPPPPTIPPAKEVCKAAKADLAFLVDGSWSIGDDNFNKIISFLYSTVGALDKIGPDGTQ
VAIIQFSDDPRTEFKLNAYRTKETLLEAIQRIAYKGGNTKTGKAIKHAREVLFTGEAGMR
RGIPKVLVVITDGRSQDDVNKVSREMQLDGFSFFAIGVVDADYSELVNIGSKPSERHVFF
VDDFDAFTKIEDELITFVCETASATCPLVVKDGNNFAGFKMMEMFGLVEKEFAAVEGVSM
EPGTFNVYPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRILPDTPQEPFALWEILNE
GYEPLVGVILDNGGKTLTFFNYDYKGDFQTVTFEGPEIRKMFYGSFHKLHVVISKTTAKI
IIDCKQVSEKTINAAGNISSDGIEVLGRMVRSRGPRDNSAPLQLQMFDIVCATSWANRDK
CCELPGLRDEENCPALPHACSCSEANKGPLGPPGPPGGPGVRGAKGHRGDPGPKGPDGPR
GEIGVPGPQGPPGPQGPSGLSIQGLPGPPGEKGEKGDLGFPGLQGVPGASGSPGRDGAQG
QRGLPGKDGPTGPQGPPGPMGIPGAPGVPGITGSQGPQGDVGAPGPPGAKGERGERGDLQ
SQAMVRAVARQVCEQLIQGHMARYNSILNQIPSQSVSTRTIAGPPGEPGRPGAPGPQGEQ
GSPGMQGFPGSPGQPGRPGERGLPGEKGEKGNPGVGTQGPRGPPGSTGPPGESRTGSPGP
PGSPGPRGPAGHTGPPGSQGPSGPPGYCDPSSCAGYGMGGGYGEPTDQDIPVVQLPHNSY
QIYDPEDLYDGEQQPYIVHGSYPLPSPYSQSYPSPHLAQPEFTPVQEEMEAVELRSPGIS
HFARRIAKRSARTPARTKANGKRPSQ
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgctttgtcggtatgagatgcagagctgcttcctcttggcttttctagctgtcacagct
ttcttcatcagtgatgcccagggccaagtgtccccaccaacaagactaagatataatgta
gtgagccctgacagtgtacagatctcttggaaagcccccaaagggcaattcactggatat
aaacttcttgtcactccgagttcaggtggaaaaacaaatcagttaattcttcaaaacact
gcaaccaaagcaattattcaaggtctcattccagatcaaaactatgctcttcagatcatt
gcattcaatgaagacaaggagagtaagccagcacaaggccagttcagaattaaagatata
gagagaagaaaagaaacaaataaacccaaggtgaaggatccagaaaaaacaaatgcgagt
aaaccagctccagaaggaagcctgtttacctgtaaaactccagcaattgcagatattgtg
atacttgtagatggttcttggagtattggcagattcaatttcaggcttgttcgactgttc
ctggaaaacctggtttctgctttcaatgtgggatctgagaaaacaagagtaggtcttgca
cagtacagtggtgatccccgaattgaatggcatttgaatgcctatggcacaaaggatgct
gttttggatgcagtccgtaatctcccatataagggagggaatacattaacaggtcttgcc
ttaacttacattttggaaaacagctttaagcctgaagcaggtgcaagacctggagtatct
aaaattgggatactgatcactgatgggaagtcccaagatgatgttatccctcctgctaaa
aacctccgagatgctggcattgagctgttcgctatcggtgtaaagaatgcagatataaat
gagctcaaagagattgcttctgaacctgacagcacacatgtctacaatgtggctgacttt
aacttcatgcataccattgtggaagggcttaccagaacagtgtgctcacgagtagaggaa
caggaaaaggaaatcaaaggaacaattacttcacttgggactccttcagatctggtcaca
tcagaggtgacagcgagaggattccgggttagctggacccatgcgccaggcaaagtggaa
aaatacagggttgtgtactatcccactcgaggaggaccaccggaagaggttgtggtagat
ggaagtgtatcaacagcagttctgaaaaacctgatgtctttaactgaataccagatagct
gtatttgccatatactcaaatgctgccagtgagggcctccgtggaacggaaactacactc
gccttgccaatggcctcggatctgcaattgtacgacgtgtcgcagagcagcatgagagtg
aagtggaatggagtagcgggtgccacaggttacatgatcctatatgctcccctcacagaa
ggattggcagcagatgagaaggagataaaaattggggaggcctcaacagatcttgaactg
gatggactattgccaaatacagaatatacagtcacagtttatgccatgtttggagaagaa
gccagtgatccccttacaggacaagaaactacattgcctctaagtcctccagcaaatttg
agattttctgacgttggacacaatagtgctaagctaacatgggatcctgcttccaaaaat
gtaaatggctatcgtatcatgtatgttaaaacagatggaacagaaaccaatgaggtggaa
gttggtcgtgtttcaacccatactctgaaaagtctggcaccccttacagagtatactgtg
gctattttctccctgtatgatgaaggacaatctgaaccacttactggcagctttaccaca
aaaagagttccagctccccagcatttggaaattgatgaagcatcaacagatagttttagg
gtcagctggaagcccacctcatcaaatattgcattttacagattggcatggattcctttg
gatgggggggaatctgaagaggttgtcataaatggagatgcagacagtcatgttatagag
ggtttgttgcccgacacagaatatgaagtttctttgctggcagtttttgatgatgaaact
gagagtgaagttgttgctgttcttggagctacatttgcaagttctaccacagtgccctcc
acggtgactaccaccagcgccacaacctctgagcccaccacagcagtttttcgaacagga
atcaggaaccttgttatagatgatgaaacaacctcaagtctgagggtgacgtgggacatt
tcagattacagtgtccagcagttcagagtgacctatctcactgcgaagggtgaccgttct
gaggaagcggtaagaatggtgatggtgcctgggagacaaaacactcttctgcttcaccct
ctgctgtctgatacagaatacaaagttaccataactcccatctatgctgatggggaagga
gtcagtgtctcagctcctggcaaaactttacccctgtctgctcctagaaatttacgtgtc
tcagatgagtggtacaacagattgcgcatcagttgggatgccccaccatcaacaacaatg
ggttacagagttgtctacaaacctatcaacattcctggtcctgcgttggagacctttgta
ggggatgatattaataccattctgattctaaatctcttcagtggaacggagtacagtgtt
aaagtatttgcttcgtactcaacaggcttcagtgatgccctaacaggcgtagctaaaacc
ttgtacctgggtgtgacaaatctggattcctatcaagtccgcatgaccagtctgtgtgct
cagtggcagctccacagacatgctactgcatacagggtagttatagagtcacttgtggat
ggaaaaaagcgagaagtaaatcttggtggagggacacctagacattgtttctttgagctg
atgcctggaactgagtataagatcagtgtgcatacacagcttcaggagatcgagggccct
gctgtaagcatcatggagacaacgttaccacttccaactcaaccaccaacaacaccttca
acaccacctcccccacctacaatcccgcctgcaaaagaggtgtgcaaagcagccaaagct
gacctggcattcctggtggatgggtcatggagtattggagatgacaatttcaataaaata
ataagctttctctatagcactgttggagctttggataagattggtcctgatggaacacag
gtggcaataattcagtttagtgatgatcccaggacagaatttaaattgaatgcatacaga
acaaaagagactcttcttgaagctattcagcgaatagcctacaaaggaggaaatacaaaa
acaggcaaagccattaaacatgcaagagaagtcttgtttactggagaggcaggcatgaga
aggggcattccaaaggttttggttgtcattactgatgggcgatcgcaggatgacgtgaac
aaagtctccagagaaatgcaactagatggtttcagcttttttgccattggagtagttgat
gccgactattcagagttagtgaatattggcagcaagcccagtgaaagacatgtcttcttc
gtggatgactttgatgcctttacaaagattgaagatgagctgatcacttttgtttgtgaa
actgcatcagcaacctgcccattggtagttaaagatggcaataattttgcaggatttaaa
atgatggaaatgtttggtttggttgaaaaggagtttgccgctgtggaaggggtttcaatg
gaacctggtacatttaatgtttacccatgctacagactgcacaaggatgccctggtgtca
cagcctaccaagtatttgcatcctgaaggtctcccttctgattacaccatcacctttctc
tttcgtatactccctgacacacctcaggagccctttgctctttgggagattttaaatgaa
ggatatgaacccctggttggcgttattttagataatggtggtaaaactctgactttcttt
aactatgactacaaaggagatttccaaactgtgacttttgaaggtcctgaaataaggaag
atgttttatgggagttttcataagctgcatgtggttatcagcaaaactacagccaagata
attattgactgcaagcaagtgagtgagaagaccattaatgcagcaggaaatattagttct
gatggcatagaagtgctggggagaatggtgagatccagaggaccaagagacaactccgca
ccactgcagttacagatgtttgacattgtttgtgctacctcatgggccaatcgagacaaa
tgctgtgaacttcctggcttgagagatgaggaaaactgccctgcccttcctcatgcttgt
tcctgttcagaagccaataagggtcctcttggacctcctggaccaccgggtggaccaggt
gtcagaggtgccaaaggtcatcgtggtgatccaggtccaaagggaccagatggacctcga
ggtgaaattggtgttcctggaccacaaggacctccaggaccacaaggacccagtggactt
tctattcaagggcttccagggccaccaggtgaaaagggagagaagggagatctcggtttt
cctggcctgcagggtgtcccaggagcatcaggttcacctggaagagatggagctcaaggt
caaaggggccttcctggcaaagatggacccacaggtccacaaggacctcctggcccaatg
ggcatacctggtgctccaggtgttccaggtattactggaagccaggggccacaaggtgat
gttggagctcctggtcctcctggagctaagggtgaaaggggtgagcggggtgacctccag
tcccaagcaatggttcgtgctgttgctcgtcaagtgtgtgaacagctcatccagggtcat
atggcaagatataactcaattctgaaccagatcccaagccagtctgtctcaacacgaacc
atcgcaggacctcctggtgagccaggtcggccaggagctccagggccacagggtgaacaa
ggatcaccgggcatgcaagggtttcccggaagccctggtcaacctggaagaccaggagaa
agaggtttaccaggtgagaaaggagaaaaaggcaatccaggtgttggaacacaaggaccc
cgaggcccaccaggatctacaggacctccaggagaaagtcgaactggcagcccaggaccg
ccaggatcaccaggcccacgaggtcctgccggtcacacgggacccccaggctcacagggc
ccttctggtccccctgggtactgtgatccgtcctcctgcgctggttatggcatgggaggt
ggatacggtgagccaactgatcaagacatcccagtagtgcagttgccacataactcctac
caaatctatgaccctgaggacctttatgatggtgagcaacagccgtacatagttcacggg
tcctaccccttaccatccccatactcccagtcctatccatcacctcatcttgctcaacca
gaatttactcctgtccaagaagagatggaagccgttgaactgagatccccaggaatcagt
cacttcgcaaggaggatagccaaaaggagcgccaggactccagcacgcacaaaggcaaat
ggaaaaagaccttctcaatga
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integrated database retrieval system
