Empidonax traillii (willow flycatcher): 114058045
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Entry
114058045 CDS
T05887
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114058045 (ZC3H12C)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
114058045 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
114058045
NCBI-ProteinID:
XP_027740807
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MKNNKVESSTCSSFMGLKDHLGHDLGHLYVGSTGTQINAIVPWSMVEKPTMDKVNSRKED
VEKEASEETSGSSSCDSEESTNSDNDSERLNNSASESHLLPKTHRELCRSPCLEPHILKR
NEILQDFRIEEAQIVPKEVKKPPDVVKEYQTKLEFALKLGYSEEQVQLVLNKLGTDALIN
DILGELVKLGNKTETDQTVTNANTSVIREASSLESQRSESPLQEDVTEDGDNLRPIVIDG
SNVAMSHGNKEVFSCRGIKLAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKL
EKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDE
RLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYH
PERGNQPQRSVADELRAMSRSTAAKTTSEGGLVKSNSVPCSTKNDSTSELKRAAPKRQSD
PSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPSSSAGKPQSTAPLTNGLPSGVHFPPQD
QRSQGQYPTVMMATKNHGTPMPYDQYPKCESPVDVGYYSMLSAYSNLSISGPRSPERRFS
LDTDYRISSVASDCSSEGSVSCGSSDSYVGYSDRSYMSSPDPQLEENLKCQHMHPHGRLN
TQPFLQSYHEPLTRVQSYSHEEPKHHHKSPMPYMAVHLQHPTVGARSSCPNDYSTSQSSP
HSKTMHLGRALVSTRIDSISDSRLYDNSPLRHRKPYSGQDGLGGWDRQSYGMDAYGYRQT
YSLPSNPTQPCYEQFAFQSLPEQQDQTWRVPYCGIPQDPARHQDTREKVYINLCNIFPPD
LVRIVMKKNPHVTDAQQLAAAILVEKSQLGY
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaacaaggtggagtcaagtacatgcagcagcttcatgggcttgaaggatcat
ctggggcatgacttaggccacctttatgtggggagcactggcacacaaataaatgcaatt
gtaccttggtcaatggtggagaagccaacaatggataaggttaattctaggaaagaagat
gtagaaaaagaggcatctgaagagacttccggaagctccagctgtgactctgaagaaagc
acaaattctgataatgattcagagagactgaataattctgcatcggagtcacatttattg
cctaaaactcaccgagagctgtgccgatctccttgcttagagcctcatatactaaaaaga
aatgaaatcttgcaagactttaggatagaagaggctcagatagtacctaaggaagtcaaa
aaaccccctgatgtggtgaaagaatatcaaaccaaactggagtttgcacttaagttgggt
tactctgaagagcaggttcaacttgtactcaataaacttggtactgatgctttaataaat
gatattttgggagaacttgtcaaacttgggaataaaactgagactgatcagactgtaact
aatgctaacactagtgtaatacgtgaagcgtcttccctagagtctcagaggtcagagtct
ccactgcaggaggatgtgacagaggatggtgacaacctgaggccaatagttattgatggc
agcaatgttgcaatgagccacgggaacaaagaagtattttcttgtcgaggaatcaaattg
gcagtggactggtttttggaaagaggccacaaggatgttactgtgtttgtgccagcatgg
aggaaagaacagtcaagacctgatgctcttataacagatcaagaaattttgcgtaaatta
gaaaaggagaagattcttgtgttcacaccatcccggcgagtgcaagggagaagggtggtg
tgctacgatgaccgatttatagtgaagttggcctttgagtcagacggcatcattgtttct
aatgataattacagggatctagctaatgaaaagccagaatggaagaagttcatagatgag
cgcttgttgatgtattcatttgttaatgacaaatttatgcctcctgatgatcctcttggc
cgccatggtccaagtctggacaattttcttaggaagaagcctattgtgccagaacataag
aagcaaccgtgtccctatgggaagaaatgtacctatggacacaaatgcaaatactatcat
ccagaaagaggaaatcagcctcagcgatctgtagctgatgaacttcgtgccatgtctaga
agcacagctgccaaaactacaagtgaaggaggactggtaaaaagcaatagtgttccctgt
agcacaaaaaatgatagcacttctgagctgaaacgtgctgctccaaagaggcaatcggat
cctagtataaggactcaagtctatcaagacttggaggaaaagcttcccaccaaaaacaaa
ttggaaaccaggtctgtaccttctttagttagtataccaagttcctctgctggaaaaccc
caaagtactgcacctttaactaacggccttccatccggagttcacttcccacctcaggat
caaagatcacagggccagtatcctacagtgatgatggcaaccaaaaatcatggaacgcca
atgccttatgaccagtatccaaaatgtgagtctccggtggatgtagggtattactctatg
ctgagtgcatattcaaatctaagtatatctggtccacgtagtcccgaaaggcgcttctcc
ttggacacagattataggatcagctctgtagcttccgactgcagcagcgaagggagcgtt
agctgtggcagtagtgactcctatgtgggttacagcgatcgctcttacatgagttcgcct
gacccacagctggaggagaacttgaagtgccaacatatgcacccgcacggccgccttaac
actcagcccttcctacagagctaccacgagcctctcacacgagtgcaaagctatagtcac
gaagaaccaaagcatcaccacaaatctccaatgccgtacatggctgtgcatctgcagcat
ccgacagtcggtgctcggtccagttgtccgaacgactactccacatctcagagttcgccg
cattcaaagaccatgcacctggggagagcccttgtgtccacgagaatagacagcatttca
gactcacgcttgtacgataattctcctttaagacacagaaagccttattctggccaggat
gggctcgggggctgggataggcagagttacgggatggatgcatatggctaccgccaaacc
tactccttgccgagtaaccccacgcagccgtgttacgagcagtttgccttccaaagcctc
cctgaacagcaggaccagacttggcgtgtaccttactgtggaatccctcaagaccctgcg
aggcaccaagacacccgcgagaaggtttacattaacctctgcaacatcttcccccctgat
ctggtcaggatcgtcatgaagaagaaccctcacgtgacggacgctcagcagctcgctgca
gccatcttagtggaaaagtctcagctaggttattga
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