Empidonax traillii (willow flycatcher): 114058209
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Entry
114058209 CDS
T05887
Symbol
CCDC88C
Name
(RefSeq) protein Daple isoform X1
KO
K25811
protein Daple
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114058209 (CCDC88C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
GAS
ATG16
Motif
Other DBs
NCBI-GeneID:
114058209
NCBI-ProteinID:
XP_027741115
LinkDB
All DBs
Position
Unknown
AA seq
2095 aa
AA seq
DB search
MDVTVSELLELFLQSPLVTWVKTFGDLGSGDQDNLGVYMDLVDGVVLNKIMLQIDPRPTN
QRVNKHVNNDTYLRVQNLTILVRNIKTYYQEVLQQLIVMNLPNVLMIGKDPLSGKSMDEI
KKLLLLVLGCAVQCERKEEFIERIKQLDIETQAAIVSHIQEVTHNQENVFDLQWLELPDM
APEELESLSRNMVFHLKRLIDERDECTEVIVDLTQERDYLQSQQPPSPLKAPSPESSPNP
ANPLSNEDKQHLTVELADTKAKLRRIRQELEEKSEQLADSKHEVEQLTLELQKVKQENIH
LASDARSARAYRDELDSLRERANRVERLEMELVRCKEKLHDVDFYKARMEELREDNIVLI
ETKAMLEEQLTLARARGDKLHELEKENLQLKSKLHDVELDRDTDKKRIEELLEENMVLEI
AQKQSMNESAHLGWELEQLSKSTDLADTRKSFVFELNECASSRILKLEKDNQSLQNTIQE
LRDASLTSRESSLKFVELEKENQQLSKKIEKLQNQIEKEKQSNQDLETLSEELIKDKEQL
QVVMETLKADKDRQIQDLKQENDHLNQVVLSLRQRSQVSSEARVKDIEKENKILHETVTE
TSSKLSKLEFEKKQLQKDFDQVREKVERVEEMEKELHRLERENEQLTKKAAVMKIVTEKV
EVLEQENGDLEVENRKLRKSLDTLQNISIRLGDLERDNKQLDEENLELRKVVETMRFTST
KMAQIEAENKDLVREKEDLRKNVEMLKAMNKKSERLELSYQSVNSENQRLQQIVENSSKK
IQELEKEVQGMESENQVLQRNLEELKVSAKRLERLEKENKALEQEMSQLEKDKKMLEKET
KRLWQQVEMKDAILDDSTVKLAVAEKENKTLEKEIARFRDSSNKLKEFEKDNKDLLKQVT
IDKRTLATLREDLVLEKLKSQQLSSELDKLSQELEKIGLNKELLLEDDSGNDDTKYKVLE
SKTESALKSTLALKEEKIAMLEAQVKDSLNLNQQLQNDLNMMKKDFDALKQTQQDGQYDQ
KSLRCSAEELNQQTNEKLEMGHQEATTELLKLKDRAIELERNNAALHTEKQLLKEQLKHL
ETQNVSFNNQILTLQKQNVFLQEHNTALQTQTAKLQVENSTLSSQSASLMAQNALLQNQQ
TAKENENENLLKQKEQLKAEYESLLQDHEHLASLHERQSAEYEMLINQHSCLKTLHKNLD
LEHKGLGERYNSLMKHKAELEELELVLKTEREVLQQERRSNAITTGENQKLREELDRVNF
LHSQLKAEYEGLHSHTKELKTSLNNSQLELNRWQARYDELKEQHQSMDISLTKLDNHCEL
LSRLKGNLEEENHHLLSQIQMLSQQNQMLLEQTMESKEQYHEEQKQYIDKLNALRRHKEK
LEEKIMDQYKFYDPAPKKKNHWIGARALVKLIKPKKETARERLKPAAESPTWHSESPEMV
NSPSASQKLKHQHESQDNTSQGSNPMEERENPGGSSNKVLMDLKQKRNSHHGGSNDNAEI
SADSATKPCCVEMGPRTYSTSAIHLHTSTPISRLQSRPKGYNSEDNLCEQSPEVELASTR
QHVSRPSSLESSRNASSSSSPLNLKGSLDHMHGRTESLSSEDMVPSREAPALLRDTYPLH
SASAMLSPSSRQESSSHRNGLISYDKPQKSNPSQSYPGRQRAASPGSEMVTLEEFLEESN
RLSPPSHRHSLNESEMISLQQFLLEADALYPSCHSPCPSIRQEHSQSLESLLSHSCPDSV
RHRTGRGNRRSASLYISRDTSSNRDDLLSDYFRKANEPSATGNLPVQPPRKEAAKMPPSL
VAPTVKMNIVNEEGRTAKPGNYVKPNLRQVEPTLANSQGGSLKPPHTPQHQPGGGMRQMA
QPQQPGATSRRSTSLSRAFSLASADLLRATGPETYRQESTQKSAAELHGGKDVVSQSTRA
SVPTSSQVILRERPQSAKVAGSLQGVDSRCRQLDARRLSLAPPKDERPLSFPQFSASPTA
STSSLNAQQPERVNPGQHYSSVSHTPSKVKPKPAPRTEEVATGAPGRAVSSSTEGNTSLG
HGQGDTLLTKCQGKLQESSTEAVEEPVRGSSSNSTPGSPDLQGDQQTVWYEYGCV
NT seq
6288 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaccgtctccgagctcctggagctcttcctgcagagccccttggtgacctgg
gtgaaaaccttcggggacctggggagcggggaccaggacaacctcggcgtctacatggac
ctggtggatggcgtcgtcctgaacaaaatcatgcttcaaatagatcctcgaccgaccaac
caacgcgtcaacaagcacgtaaataatgacacctatcttcgggttcaaaacctgactatc
ttagtcagaaacattaagacttactatcaggaggtcctgcagcagctgattgtgatgaat
ttaccaaatgttttaatgattggcaaagatccgctttctggtaaaagtatggatgaaatt
aagaagctgctgctgttggttctgggctgtgccgtgcagtgtgaaagaaaagaagaattt
attgaaagaataaaacaactggatattgaaacccaagctgccattgtgtcacacatacaa
gaggtgactcacaaccaggagaatgtctttgacttgcagtggctggagctcccagatatg
gccccagaagaactagagtctctctccaggaatatggttttccacctcaagaggctcatt
gatgagagggatgaatgcacagaagtcattgtagatctcactcaagagagagattatctg
cagtctcagcaaccgccaagccctctgaaagcaccaagtccagagtcttcaccaaaccca
gctaaccctctttccaatgaagacaagcagcacctcacagttgaactggcagacacgaaa
gctaaattgagaagaatccggcaggagctggaagagaagtctgagcagctcgcagattct
aaacatgaagttgagcagctcaccctagagctgcaaaaagtaaaacaagagaatatccac
cttgcctcagatgctcgctctgcccgagcatacagagatgagcttgactctctgagagag
agggcaaaccgtgtggagagacttgagatggaacttgttcggtgcaaagagaaacttcat
gatgtggatttttacaaagctcgcatggaggaattaagagaggataacattgtactaatt
gaaacaaaggccatgctagaagaacagctaacattggcaagagctcgtggtgataaactg
catgaattagagaaggaaaatttgcagttgaaatccaaacttcatgatgtggagctggac
cgggacacggacaagaagagaattgaggagctgctggaggagaacatggtcttggagatt
gcacagaaacagagcatgaatgagtctgcacacctaggctgggaactagaacaactgtct
aaaagcacagatcttgcagataccagaaagtcctttgtgtttgagttgaatgaatgtgct
tccagtcgcatactgaagctagagaaggataatcagagcttgcagaacaccatacaagag
ctgagagatgcgtccctgacctccagagagagcagcctaaagtttgtggagctggaaaag
gaaaatcaacagcttagcaaaaagattgagaagttgcaaaatcaaattgaaaaagagaag
caaagtaatcaagatttggaaaccttgagtgaggagctgataaaagataaagaacagcta
caagtcgtcatggagactctaaaagctgacaaagacagacagatacaagaccttaaacaa
gaaaatgatcaccttaatcaagtcgtcttatccctgagacaaagatcacaagtgagcagc
gaggcaagagtgaaagatattgaaaaagagaacaaaatccttcatgaaacagtcaccgag
acaagtagcaaactgagcaagctggaatttgagaagaaacaattgcaaaaggattttgac
caggttagagaaaaagtggaaagagtggaagaaatggaaaaagaactccaccggctggag
agggagaatgaacagctcacaaagaaggcagcagtgatgaaaatagtgacagaaaaagtg
gaagttcttgagcaggagaatggggatctagaagtggaaaacaggaagctaagaaaatcc
ttggacacgctgcagaatatttccattcgacttggggacctggaaagggacaacaaacaa
ttggatgaagaaaatctggagcttagaaaagtggtggagaccatgagatttaccagcaca
aaaatggcacaaatagaagcagaaaataaagatttggtgagggagaaagaggacttaaga
aagaatgtggaaatgttaaaagcaatgaacaagaagtcagagaggctggagctaagctat
cagagtgtcaactctgaaaaccagagacttcagcaaattgtggagaacagcagtaaaaag
atccaagagttagaaaaagaagtacagggaatggagagtgaaaatcaggtcctccagaga
aaccttgaggagctaaaggtttctgccaaacggctagagaggttagaaaaggagaacaaa
gccctagaacaagaaatgtctcagcttgagaaagacaaaaaaatgctagagaaagaaaca
aaacggctttggcagcaagtggagatgaaagatgctattttggatgatagtacagtaaag
ttggcagttgctgagaaagaaaacaagacactagaaaaggaaattgctcgattcagagat
tcatctaataagctgaaagaatttgaaaaggacaataaagatctcctaaagcaagtcaca
attgataagagaacactagctacattgagagaggatttggtcctggagaagctgaagagt
caacagttgtccagtgagctagacaaactgagccaggaactggagaagatagggttgaac
aaagagctgctactagaggatgacagtggcaatgatgacacaaaatacaaggttttggag
agcaaaactgaatcagcactaaaatcaacactagctttgaaagaggaaaagattgcaatg
ctggaagctcaagtgaaagactctctgaacttgaaccagcagttacagaatgatctaaat
atgatgaagaaggattttgatgcacttaagcagactcaacaggatgggcaatatgaccag
aagtcactgaggtgttcagcagaggaactcaaccagcaaacgaatgagaaattggaaatg
gggcaccaagaggctaccacagagctgctgaaactgaaggacagggcaattgaactggaa
aggaataacgcagccctgcatactgagaagcagctccttaaagaacagctaaagcatttg
gaaacacagaatgtctccttcaacaatcaaatcctgacactacagaagcaaaatgtcttc
cttcaggagcacaatactgccctgcagacacagacagccaaactccaggtagaaaattca
actctcagctcccagagcgcttcactgatggcccagaatgctttgctccaaaatcagcag
acagccaaggagaatgagaatgaaaatctactaaaacagaaggagcagctgaaagcagag
tatgagtcattgcttcaagaccacgaacaccttgcttcactgcatgaacggcagtctgca
gagtatgaaatgctaataaaccagcacagctgcctgaaaacattacacaaaaacctggat
ctggagcacaaaggtttgggtgagagatacaacagtttaatgaaacacaaggcagaattg
gaagagttggaattagttttaaaaactgagagagaggttctgcaacaagagagaagatca
aatgcaataaccactggggaaaatcagaagctgagggaggaactggacagggtgaatttc
ttgcacagccaactaaaggcagaatatgaagggctgcattcacacactaaagagctgaaa
acttccttgaataactctcagctggagctgaatcgttggcaagctcgctacgatgagctg
aaggagcagcaccagtccatggatatctctctgaccaagctggacaaccactgtgagctg
ctgtcacgtctgaagggaaatctggaagaagaaaaccatcatctcctgagtcagattcag
atgctgagccagcagaatcagatgttactggagcagaccatggagagcaaggagcagtat
catgaagaacagaaacagtacattgataaattgaatgccttaaggagacacaaggaaaaa
cttgaagagaagataatggatcagtacaagttctatgatcctgctccaaaaaaaaaaaac
cactggattggagccagagccttagtcaaactaatcaagccaaagaaggagactgcaagg
gagaggttgaaaccagcagcagaaagccccacatggcattctgaatccccagagatggta
aactctccatctgcctcccagaaattgaaacatcaacacgagtctcaggataatacctct
caagggtcaaaccctatggaagagagagagaaccctgggggttcttcaaacaaagtgcta
atggacctaaagcaaaaaaggaattcccatcatggaggcagcaacgataatgctgaaatc
tcagcagactctgcgacaaaaccctgctgtgtggaaatgggtcccaggacttactcaacc
tcagctattcacctgcacacttccacccccatctccaggctccagagcagaccaaaaggc
tataattcagaagataatctatgtgaacagtcccctgaggtggagttggcaagcaccaga
cagcatgtgtccagaccaagcagtttagagagcagtaggaacgcttccagcagtagttca
cctctcaatttaaaaggttccttagaccatatgcatggtagaacggagagcctcagcagt
gaagatatggtgccaagcagagaggcaccagccttgctccgagacacctatccccttcac
tctgcttctgccatgttaagtcccagcagcaggcaagagtcctcctcccaccggaatggt
ttgatctcttacgataaacctcagaagagtaacccatctcagtcttacccaggcaggcaa
cgggctgcctcacctggcagtgagatggtaactttggaagagttcttggaagagagcaac
aggctgtctccaccaagtcatcggcacagtttaaatgagagtgaaatgatttcattgcag
caatttctgttagaagctgatgcactgtatccctcttgccactccccatgtccttccatt
cgtcaggaacattcgcagtcactcgaatcgctcctcagtcattcatgtcccgacagcgtg
aggcacaggacaggcagggggaataggagatctgcttcactatatatctccagggacacc
tccagtaacagagatgacttgctcagcgattattttaggaaagcaaatgagccttcagct
actgggaacttgccggttcagccacccagaaaggaggctgctaagatgccccctagtctt
gttgctccaactgtgaagatgaacattgtcaatgaagaaggaagaacagctaaacctgga
aattacgtgaagccaaacctcaggcaagtggaacccactctggcaaactcccaagggggg
tcccttaagcctcctcacacgccacagcaccagcctggcggtgggatgcggcagatggca
cagcctcagcaacctggagccacgagcaggaggagcacgtccctgagcagagcattcagc
ttagcctctgcagacctcctcagagccactggcccagagacctacaggcaggagagcact
cagaagtcagcagcagagctgcacgggggcaaggatgttgtcagtcagagcaccagggct
tctgtgccaacgagctcccaggtaatcttaagagagaggccacagtctgcaaaggtggca
ggttccttgcaaggtgtcgattcccgctgtcggcagctggacgcgaggcgcctttccctg
gccccaccaaaagatgagaggccgctctccttccctcagttctctgcctcgcccactgca
tccaccagcagtctgaatgcccagcagccagagcgtgtgaacccggggcagcactattca
tctgtgtcgcacactccttcaaaagtcaaacccaagccagcccctcgtactgaggaggtg
gccacaggggcccctggcagagctgtttccagcagcactgagggaaatacttccttaggg
catggccagggtgataccctacttactaagtgccagggtaagctgcaagaaagcagcact
gaagctgtagaggagcctgtgagaggaagcagctccaacagcactcctgggtctcctgac
ctccagggggatcagcagacggtttggtatgagtatggctgtgtgtaa
DBGET
integrated database retrieval system