Empidonax traillii (willow flycatcher): 114058301
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Entry
114058301 CDS
T05887
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04010
MAPK signaling pathway
etl04020
Calcium signaling pathway
etl04144
Endocytosis
etl04510
Focal adhesion
etl04540
Gap junction
etl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114058301 (PDGFRA)
04020 Calcium signaling pathway
114058301 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114058301 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
114058301 (PDGFRA)
04540 Gap junction
114058301 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
114058301 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
etl01001
]
114058301 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
etl04090
]
114058301 (PDGFRA)
Enzymes [BR:
etl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
114058301 (PDGFRA)
Protein kinases [BR:
etl01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
114058301 (PDGFRA)
CD molecules [BR:
etl04090
]
Proteins
114058301 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
ig
I-set
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
114058301
NCBI-ProteinID:
XP_027741305
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MGTSPWMFLILGCFLTGPFLTFCQLPLPTIVPSRNEMVVQLNSNFTLKCSGDSEVSWQYP
VTEGSHRIDIRHEENNSGLFVTVLEVVNASAAHTGLYVCYYNHTQVEDGEVEGKNIYIYV
PDPDMPFVPSIPEDQFILVEEGDPTVIPCRTSDPGAQVTLTDSLDKAVEALYDPKQGFIG
NFPAGSYACKTMAKGVEFKSDEFLVYIIRATSQLPVEIEALKTVYKTGETIVVTCVVFDN
EVVNLQWNYPGKVKEKGLIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENKKVVITVHDKGFVHLEPQFSPLEAVNLHEVKNFVVDVQAYPAPKMYWLKDNVTLIENL
TEIVTSSNRVQETRFQSVLKLIRAKEEDSGYYTLVAENEDEIKRYTFSLLIQVPALISAL
VDDHHGTTGGQTVRCLAEGTPLPDVEWLVCKDIKKCSNDTSWTLLTNNISDIHMEAHLDE
KNTVESQVTFQKVEETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLNRHPEKPKKDLDIFGMNPADESTRSY
VILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSMSESEVKN
LLSDDGSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGEYKK
SYEKIHLDFLKSDHPAVTRMRGDCDNAYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacctccccatggatgttcctgattctgggatgttttcttacaggaccgttctta
acattttgccagcttcctctgccgactattgttcccagtaggaatgaaatggttgtacag
ctgaattccaatttcacactcaaatgctctggagacagtgaagtgagctggcagtaccca
gtgactgagggaagtcacaggatagacatcagacatgaagaaaacaacagtggcctcttc
gtgacagtgctcgaagtagtaaatgcctcagctgctcatacaggcttgtatgtttgctat
tataaccacacacaagtggaggatggggaagtggaagggaagaacatctacatctatgtg
cctgacccagacatgccttttgttccttctataccggaagaccagttcatccttgtagaa
gaaggtgatcccacagttatcccttgtcggacaagtgacccaggtgctcaagtgacttta
actgacagcttagacaaggctgtggaagctttatatgaccccaaacaaggcttcatagga
aattttcctgcgggctcatacgcatgcaaaacaatggctaagggcgtggagttcaagtct
gatgagttcctcgtctatattataagagctacttcacagcttccggttgaaattgaagct
cttaaaactgtctacaaaacaggcgagaccatcgtagtaacttgtgtggtctttgacaat
gaggtggttaatttacagtggaattatcccgggaaagtgaaggaaaaaggtctgataaaa
cttgatgatatcaaagtcccatcacagaagctggtttacaccctgaccattcctgaggca
tcagtgaaagacacaggggattatgaatgtactgctcggcatgcaaccaaggaggttaag
gaaaataagaaagtagtcattacagttcatgacaaaggctttgttcacctggagcctcag
tttagccctctggaagctgtcaacctgcacgaagtcaaaaactttgttgttgatgtgcag
gcttacccagcaccaaaaatgtactggttgaaggataatgtgactctgattgaaaatctt
actgagattgttactagttctaacagagtccaggaaacaaggtttcagagtgtattaaaa
ttgatacgggccaaggaagaagacagcggatactatactttggttgctgaaaatgaagac
gagattaaaagatacaccttctccttgctaatacaagttccagctctgatctcagccctt
gtggatgatcatcatggcactacaggtgggcagacagtgagatgcttggcagaggggacc
ccacttcctgatgtggaatggctggtttgcaaggatattaaaaagtgcagcaatgacacc
tcgtggacccttttgactaacaatatctctgatatacacatggaagcccacctggatgag
aaaaatacggtggaaagccaggtgaccttccaaaaggtagaggaaaccctggctgtgcga
tgtgtggcaaggaatgacctcggtgctgttactcgagaactgaagcttgtggctcccacc
ttacgatcagagctaacggtggctgctgctgtcttagtgctgttagtgattgtgataatt
tccctgattgtcctagtcatcatatggaaacagaagccgaggtatgagattagatggaga
gtcattgaatctatcagccctgatggccatgaatacatttatgtggacccaatgcaactg
ccctatgactccagatgggagtttcctcgagatgggttagtgcttggtcgaatccttggt
tctggtgcatttggaaaagtagttgaagggactgcatatggattgagtcgttctcaacca
gtgatgaaagtagctgtgaaaatgctgaaacctacagctagatccagtgaaaaacaggcg
ctcatgtctgaactgaagataatgacacatcttggcccccacctgaatattgtgaatctg
cttggagcttgtacaaaatcaggtcctatttacatcattactgaatactgcttttatggt
gatttggtgaactacctacataagaacagggacaatttcctgaaccgacacccagagaag
ccaaagaaagatttggatatctttgggatgaacccagctgatgaaagcacaagaagttat
gtgatattatcatttgaaaacactggagaatacatggacatgaaacaagctgataccact
cagtatgtgcctatgctggaaaggaaggagggatctaaatactctgatattcagagatct
gtgtatgatcgacctgcttcatacaagaagaaatccatgtcagaatcagaagtcaaaaac
cttctttcggatgatggctcagagggactcagcctactggatttgctgagcttcacctac
caggttgcacggggaatggaattcttggcttctaaaaattgtgtgcaccgtgacttggca
gctcgtaatgtcctcctggctcaaggaaaaattgtgaagatctgtgactttgggctggct
agagacatcatgcatgattccaactatgtctccaagggcagcactttcctcccagtaaaa
tggatggcacctgaaagcatttttgacaacctatacacaacattaagtgatgtctggtct
tatggcattctgctgtgggaaatattttctcttggtggcacaccatatcctggcatgatg
gtcgattctactttctacaataagatcaagagtggataccgaatggccaaacctgaccat
gctaccaatgaagtgtatgagatcatggtgaagtgctggaacagtgaaccagaaaaaaga
ccttctttctatcatttgagtgaaattgtggagaacttgttgcctggagagtacaaaaag
agctatgagaagattcacctggacttcctgaaaagtgatcacccagctgtcacacgcatg
agaggggactgtgacaatgcttacattggtgtcacctacaagaatgaagacaagctaaag
gacagggagagtggttttgatgagcagaggctgagtgctgacagtggatacatcatcccc
ctgcctgacattgaccccgtttctgaagatgagcttggcaaaagaaacagacacagttca
cagacatctgaagaaagtgccattgaaaccggttccagtagctctaccttcatcaagaga
gaggatgagaccattgaggacattgacatgatggacgacatcgggattgactcctcagac
ctggtggaggacagtttcctgtaa
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integrated database retrieval system
