Empidonax traillii (willow flycatcher): 114058346
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Entry
114058346 CDS
T05887
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114058346 (GEMIN5)
03041 Spliceosome [BR:
etl03041
]
114058346 (GEMIN5)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114058346 (GEMIN5)
mRNA cycle factors
P-body specific factors
114058346 (GEMIN5)
Spliceosome [BR:
etl03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
114058346 (GEMIN5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
ANAPC4_WD40
DSE1_N
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WD40_Gbeta
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
ASA1
PAC11
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR41
DNAI3_WD
Beta-prop_Nup120_160
Beta-prop_VPS8
CFAP251_N
WD_LRWD1
TPR_IF140-IFT172
Beta-prop_IP5PC_F
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
114058346
NCBI-ProteinID:
XP_027741409
LinkDB
All DBs
Position
Unknown
AA seq
1531 aa
AA seq
DB search
MGMGTGMGVRALPASPNWYSSRCSDASSDGRLFGFAARHRVCLLDIGAAAPAFYGELIGH
TDRISGFAFCHCPGQSGLCASSSDDGSIKIWDAASLSPVLEYSRHQNPISALHWSPLVKD
LIVSGDEKGVIVCYWHNRSDSQQFFPEPRTVFCLTCSPHHENLVAIGYKDGMVVVIDISR
KREVLHRLRGHEDEIHCLAWCPVPGEERLAAWQDELQVPSEEGKVPNGELTQDTTTKKGC
YLASGSKDQTIRIWSCTRGRSVLTLKLPPTKRRGGAVDPAVKERIWLTVHWPPGHATDIV
SSGFGGELLLWNLAQLGKRKWTLLGSSEGHNHSRIVFNLSSVKQQDKELLFSISMDRDVK
CWDLSTLDCSWTMPSLGGFVYSLAFSPVDTGCLAIGVGDSMIRVWNTLSMNNVYDVKTFW
QSIKSKVTALSWHPTKEGSLAFGTDDGKVGIFDTFSSSAKNKPPQISSTYHKKTVYALAW
GPPTPPLTSGEESEQPSVTLYSCAGEGIVFQHNPWNLNGEANDINKVIRDTNSIKHKLPA
RTEISWKPDGKLLALGNEDGSIEIFQAPNLKLLCTIQQHHKLINAIRWHHEHGNQPDLSY
LIASGSINATIYVHNLKSVVESTSESPLTITEPFRTLAGHTAKITSLSWSPHHEGRLVSA
CYDGTAQVWDVMKEEPLCNYRGHQGRLLSVQWSPVDSDCVYTGADDFSVHKWHISKQEHT
RPPQGKKSIELEKKRSMQPKVKAKKKKKPIGQSPGKQDVNDAMNGDESVKETLLEENGVL
DHEGEKEAQEAELPDKVSTTVSKDTSSSASDYSSFNLPKPFVTQQAAPVKKDPSKEKPTP
DASLKKRKPRSILPFSTFMDHRSKDELHQDCLRLATCLKTKDNNEDVSPDLKDCIHLGLF
TDRDSLHKMIDVEGKHHLENGHPELFQQLMLWKGDMKGVLQAAAERGELTDQLVAMSPMV
GYQAWVWTVEAFAKQLCFQEQYVKAASHLLSIHKVYEAIELLKVNNFYREAIVIAKARLR
PEDPIVRDLYTSWAALLEKDGHYSMAAKCYLGASSPYDAVKVLSKKGDVTSLKIAAELAL
ITGEEELSATLSLRCAQDLLLSRNWVGAQEVLQQHKTLFGQRLVFCLNELLCKCLSERNP
CGQKSSVPPCYHSWELNREASFFDMVIEVWQNVLGMDTTERATCAWEQLRQVEHPPSTSN
TPPKQVLFHISHDLALAALSFQSGTWDEAVKSILGAVTRSFDAGNFTLMQEICSIILPEG
CDDLRHKLDSTNSQSMDACRSLEGFVAYRLLYDLWWNTPKDPPGLQKAVLDPELCPSEQT
ALEKSCLSGDSSPGETDQTPAGMDENLCSTTEGQKCETQSDSGTNLVDGQSKLKGCKVLL
SEEMAVLQNTQRDIAEVQETLAEMIRQHQRQRNNLQENTNGNTQESNLEQSSETELDKPC
SDSKQMNGKDEIKQPLTLPELTKQLVNAKQKLAEFPDNLKVLPFPDVLECCLVLLHLGSQ
CPPELQEQALDLLRKHSSSNIYKKAVRRFLT
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggggatggggacagggatgggggtgagggctctgcccgcctcccccaactggtacagc
agccgctgcagcgacgccagcagcgacggtcgcctcttcggcttcgcagcgcggcaccgc
gtctgcctgctggatatcggagccgccgctcccgcgttctacggggagctcatcgggcac
acggacaggatctccgggttcgccttctgccactgccccgggcagagcgggctctgcgcc
agcagctccgacgacgggagcatcaagatctgggacgcggcgtcgctgtcgccggtgctg
gagtacagccggcaccagaacccaatctcagcactgcactggtcacctcttgtgaaggat
ctcatcgtgtctggtgatgaaaaaggtgtcattgtttgctactggcacaacagaagtgac
agccagcagttcttcccagagcctcgcacagttttctgccttacttgttcccctcatcat
gaaaacctggtggccattggctacaaggatggcatggtggttgtcattgatatcagcagg
aaaagagaagtcctgcacaggctgaggggccacgaggatgaaatacattgtctggcctgg
tgccctgtgcctggtgaagaaaggttggctgcctggcaagatgagctccaggttccttca
gaggaaggcaaagttccaaatggggagctgacccaggacacaaccacaaagaaaggctgt
tacctggcttcgggaagcaaagatcagaccatacgaatatggagctgtaccagaggcagg
agtgtgctgactctgaagttgccccccaccaaaaggagaggcggagccgtcgatcccgct
gtcaaggagcgcatttggctcactgttcactggcctcctggtcatgccactgatattgtg
tccagtggttttggaggagaactgcttctttggaacttggcccaacttgggaaacgcaag
tggactcttctgggatcttcagaaggacacaaccattcccgaattgtgttcaacctcagc
tctgtgaagcaacaggacaaagagcttcttttttccatttcaatggacagagatgtgaaa
tgctgggacctgtcaactctggattgcagctggaccatgccctcacttggaggctttgtc
tatagtcttgccttctcccctgtggacacaggctgccttgccatcggggttggagacagc
atgatccgggtgtggaatactttgtccatgaacaatgtttacgatgttaaaaccttctgg
caaagcattaagtccaaggtcacagcattatcctggcatccaactaaggagggctccttg
gcttttggaacagatgatggaaaagttggcatatttgacaccttctccagcagtgctaag
aacaagccacctcagatctccagtacttaccacaagaagactgtgtatgcattagcctgg
gggcctccaactcctcctctgacttctggggaagaaagtgaacagccctctgtaacttta
tacagttgtgctggagaaggtattgtttttcaacacaatccctggaatcttaatggagaa
gcaaatgacatcaacaaagtcatccgagacactaattcaatcaaacacaaactgcctgca
cggacagagatcagctggaagccagatggcaaactcctggctcttggcaatgaagatggc
tcaattgaaatatttcaggccccaaacttgaagttgctctgcactatccagcagcatcac
aagctgataaatgccattcgttggcaccacgagcacgggaaccagccagacctgagttac
ttgatagcttcgggctcaatcaatgccactatttatgtccataatctgaagagcgttgta
gagagcacttcagaaagtcctttgacaataacagagccttttcgaactctggctgggcac
acagctaaaatcacgagtctttcttggagcccccaccatgagggaagattggtatctgct
tgctatgatggcactgcacaggtatgggatgttatgaaggaagagccgctttgcaactac
cgagggcaccagggccgcctgctgagtgtccagtggtcaccagtggattcagattgtgtt
tatacaggagcagatgatttttctgtccacaaatggcacatctcaaagcaggagcacaca
cggccccctcagggcaagaagagtatagaattagagaaaaaaagaagtatgcaaccaaaa
gtcaaagccaagaagaagaaaaagcctataggacagagtccaggcaaacaggatgtaaat
gatgccatgaatggagatgaaagtgtgaaggaaacgttgctggaggaaaatggagtgttg
gaccatgaaggagaaaaagaagctcaggaggcagagttgcctgataaagtctctacaact
gtgtccaaagatacatcttcatctgcgtctgattattcttcattcaacttgccaaagcct
tttgtgacccagcaagctgctcccgtgaaaaaggatccatctaaagagaaaccaactcct
gatgcctctctgaagaagaggaagcctcgttctattctgcccttcagcacattcatggat
cacagatcaaaggatgaattgcatcaggactgcttgaggctggctacatgtctgaaaact
aaagataataatgaagatgtgtcccctgaccttaaggattgcatccacttggggctgttc
acagacagggattctctgcacaagatgattgatgtggaaggaaaacatcacttggagaat
gggcatccagagctcttccagcagctcatgttgtggaaaggagacatgaagggtgtcctc
caggcagctgctgagaggggggagctgacagaccagctcgtggcaatgtcacccatggtt
ggatatcaggcctgggtttggacagtagaggcctttgcaaagcagctgtgtttccaggag
cagtatgtgaaggctgcctcccatctcctctccatccataaagtgtatgaggccatcgag
ctcctgaaagtgaacaatttttacagggaagcaattgtgattgccaaggccaggctgcgt
ccagaagatccaattgtgagggatctctacaccagctgggcagctctgttagaaaaggat
ggtcactattccatggctgccaaatgttatttgggggcatcttcaccctatgatgcagta
aaagtgttgtcaaaaaagggggatgtgacatcccttaaaattgctgctgagcttgcactg
ataactggagaggaggagttgtcagcaactttgtctttgagatgtgcacaagacctgctg
ttatccaggaactgggtgggagctcaggaagtccttcagcaacataaaactttatttggg
caaagacttgttttctgcctgaacgagctgctctgcaagtgcctcagtgaaagaaatccc
tgtggccaaaagagctccgttcccccctgttaccacagctgggagctgaacagagaggcc
tcgttctttgacatggtgatagaagtgtggcagaatgtgctgggcatggacaccactgaa
cgagccacttgtgcatgggagcagctgcgccaggttgagcatcctccttctaccagcaac
acacccccaaagcaggtgcttttccatatctcccatgacctggcccttgcagcactgagt
tttcagtctggtacgtgggacgaggcagtgaaaagtattcttggggctgtgacccgcagt
tttgatgctggtaatttcactctgatgcaggagatttgcagtatcatccttcctgagggc
tgtgatgacctgagacacaaactagacagcacaaattcccagagcatggatgcctgcaga
agtctggagggctttgtggcttacagactgctctatgacctgtggtggaacacacccaaa
gaccctcctggcttgcaaaaggctgtgttggatcctgagctgtgtcccagcgaacagaca
gctctggagaagagttgcctttcaggtgactcctcccctggggaaacggatcaaactccc
gctgggatggatgaaaacctctgcagtacaactgaagggcagaagtgtgagacgcaaagt
gactcgggaactaacttggtagacggacaatcaaaactgaagggttgcaaagtgctcctt
tcagaagagatggctgtgttacagaacacccagagagatatagcagaggtccaggagact
ttggcagaaatgatccgccagcatcagaggcagaggaacaatctccaggaaaacacaaat
ggaaacacccaggaaagcaacctagagcagagttcagagactgagttagacaaaccatgc
tctgacagcaagcagatgaatggcaaagatgaaataaagcagccacttacactccctgag
ctcacaaagcagcttgtcaatgcgaagcagaaactagcggaattcccagataatttaaag
gtcttgccattccctgatgtgctggaatgctgccttgtgctccttcaccttggatcccag
tgccctccagagctacaggaacaggctctggatctccttaggaaacacagcagttctaat
atttacaaaaaggctgtcaggaggttcctgacatga
DBGET
integrated database retrieval system
