Empidonax traillii (willow flycatcher): 114058372
Help
Entry
114058372 CDS
T05887
Symbol
USP38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
etl01002
]
114058372 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114058372 (USP38)
Enzymes [BR:
etl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114058372 (USP38)
Peptidases and inhibitors [BR:
etl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114058372 (USP38)
Ubiquitin system [BR:
etl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114058372 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
114058372
NCBI-ProteinID:
XP_027741470
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MDKILEGLVSSSHPLPLKRVIVRRVVESAETPLSQAQCRAMFALGTRLVLQGPDPFQRQV
GRQVLDAYGRFHRAEFEAFFNRGLVLGLLQRGYGELSNRDPAILDYIQAGLRLIMSCPSV
LELFELLQVEALRLVCERPAPPLCARLCQLLGDFPQCLPRGRKLSLAFCQQLVRSIAHFQ
SQGTREAELRLYVSQVTQVSALLRSVWKAEPDTLLPSLQELFAVISAADTSFEPSVALAS
LVQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVETWVIALLKGLAA
VQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLIVPHVVSLV
HSFKRDGLPSSRAFLLQLSELIHCMMYHYSGFPELYEPILEAIKDMPKPTEEKIKMILSQ
SAWTSQSSSLPSCLSRLSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRHVLSLNLN
GCNSLMRKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEE
EKTLKALSSAKRSESIMNEESQAQEAVQKTQVFAEAPCMGSEERTLIEKMFGGKLKTTIC
CLNCKSMSQKEEAFTDLSLAFCPPTSLENGPKCMEHSEVKDDYMVQTNTLATSPAAETPL
NNLDVNSGCDTIMNEGTIEDFSTEPNSENTTISELKQVQTNRDMSQTLVGKSTLSVTDLL
NYFLAPEILSGDNKYYCEKCASLQNAEKTMQIIEEPEYLILTLLRFSYDPKCHIRRKILD
NVSLPLVLELPVKSLTSPLAVVPGGWSVGVEISDTGENLAKKLKPSGADEVTCTQLVPYV
LSSVVVHSGVSSESGHYYSYARNVSGSGPSGLCHQSTALSLVSPQDKLLTEESPCTVVEN
ELDTEMSREWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLFYKKQNSTCGFSSNPANGL
WVNGDPPLQKDLMDAITKDNKLYLQEQELSARTQALQAASASCSFRPNGFDDNDPPGSCG
PTGGGGGGFSTIGRLVF
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcctggaggggttggtgagctcgtcgcacccgctgccgctgaagcgggtg
atcgtgcggcgcgtggtggagtcggcggagacgccgctgagccaggcgcagtgccgcgcc
atgttcgcgctcggcacccggctagtgctgcagggccccgaccccttccagcgccaggtg
ggcaggcaggtgctggacgcctacggccgcttccaccgcgccgagttcgaggcgttcttc
aaccgcgggctcgtcctgggcctcctgcagcgcggctacggcgagctgagcaaccgcgac
cccgccatcctcgactacatccaggcggggctgcgcctcatcatgagctgcccctcggtg
ctggagctcttcgagctgctgcaggtggaggcgctgcgcctggtgtgcgagcgcccggcg
ccgccgctctgcgcccgcctctgccagctcctgggggacttcccgcagtgcctgccccgc
ggcaggaagctctcgctcgccttctgccagcagctggtgcgcagcatcgcgcacttccag
agccagggcacccgggaggccgagctgcgcctctacgtgtcgcaggtgacgcaggttagc
gcgctgctgcggagcgtctggaaggcagagcccgacacgctgctgccctccctgcaggag
ctcttcgccgtcatctccgccgccgatacttccttcgaaccttctgttgcactggcaagt
cttgtgcagcacataccactacagatgattacagtactcatcaggagccttaccacagat
ccaaatgtgaaagatgcaagtatgactcaagctctgtgcagaatgattgactggttatcc
tggcctctggctcagcatgtggaaacatgggtgattgcactgctgaaaggattggctgca
gtccagaaatttaccatcctcattgatgtcactctgcttaagatcgaattggtctttaat
cgactttggtttcctctagtgaggcctggtgcccttgctgtcctttcgcacatgttactt
agttttcagcattctccagaagcttttcatttgattgtcccacacgtggtcagtttggtt
cactccttcaaaagggatggcttgccttccagtagagcctttctgttgcagttgtctgag
ttgatacactgtatgatgtatcattattcaggatttccagagctctatgaacccattctg
gaagctattaaggatatgcccaaacccactgaagagaagattaagatgattctcagtcag
agtgcttggacttctcaatccagttctttgccatcttgtttatctagactttctggaaaa
tctgaaactgggaagacaggtctaataaatttaggaaatacttgctacatgaacagtgtt
attcaggcactttttatggctacagatttcagaagacatgttttatctctgaatctaaat
ggctgtaattcactaatgagaaaattacagcatctttttgcatttttggcccatacacag
agggaggcatatgctcctaggattttctttgaagcttccaggccaccatggttcacccct
cgatcccagcaggattgctctgaatacctcagattcctgctagacagactgcatgaagaa
gagaaaactttgaaagcattgtcttcagcaaagcgttctgaaagtataatgaatgaagag
tcccaggcacaagaagctgtccaaaaaacacaagtatttgctgaagcaccttgtatggga
agtgaagaaagaactctgatagagaagatgtttggaggaaaattgaagactaccatatgc
tgtttgaactgcaagagtatgtctcaaaaggaagaggctttcacagatctctctctggct
ttctgtcctccaacttccttggagaatggcccaaaatgtatggaacattctgaagtgaaa
gatgactacatggtgcaaactaatactttggcaaccagtcctgctgcagaaacacctctc
aataatttggatgtaaatagtggatgtgacacgataatgaatgaaggaaccatagaagat
ttttctactgagccgaactctgagaacaccacaatttctgaactcaagcaagttcagact
aatagggatatgtctcagactctagtaggtaaaagcaccctgtcggttacagacttactc
aattattttctggcacctgagatccttagtggagacaataagtattattgtgaaaagtgt
gcctctctacagaatgctgagaaaactatgcaaatcattgaggaacctgaatacctcatt
ctcactcttttgagattttcatatgatccaaagtgtcatataaggcgtaaaatcttggac
aatgtgtctctaccacttgttttggaactgccagtcaaaagcctaacatcccctctagca
gtagttccaggaggttggtctgttggtgtggagatttctgatactggagaaaatcttgct
aaaaaactgaagccctcaggtgctgatgaagtgacctgcacacaactggtgccctacgtg
ctaagttctgtggtagtgcactctggtgtatcctctgaaagcggacattactattcctat
gctagaaatgtttctgggtcagggccttcagggctctgccaccagtctacagctctttct
ttagtttctcctcaggataagttgttgacagaggagagtccttgtactgtcgtagaaaat
gagctggacactgagatgtcaagagaatggtttctgttcaatgacagcagagtgacattt
acctcatttcagtcagtccagaaaatcaccagtagatttccgaaggacactgcttatgtt
ctgttctacaaaaagcaaaatagcacctgtggcttcagcagcaatccggcaaatggactc
tgggtaaatggagaccctcctctacaaaaggacctcatggatgcaattacaaaagataac
aaactgtacttgcaggagcaagagcttagtgctcgaacacaagcacttcaagctgcctca
gcctcgtgctctttccgacccaatggattcgatgacaacgacccccctggaagttgtggg
cccacaggtggaggagggggtgggttcagtaccattggtagattagtcttttga
DBGET
integrated database retrieval system
