Empidonax traillii (willow flycatcher): 114058436
Help
Entry
114058436 CDS
T05887
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etl03009
]
114058436 (UTP20)
Ribosome biogenesis [BR:
etl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114058436 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
114058436
NCBI-ProteinID:
XP_027741598
LinkDB
All DBs
Position
Unknown
AA seq
2791 aa
AA seq
DB search
MKSKPAAHKSGNTHRFLTFSERLSNINIDIIHRIDRTGSYAEEVETYFFEGLRKWKELNL
TQHFVQFYNEVANKCQSFHQLVYYQSAIVQSLKTHLQVEGSLAYQPLLNLVVQLARDLQA
DFYPHFHDFFLAITKLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDIHNIYSLYSTLLAH
HKLHIRNFAAESFVFLMRKVSDKNALFNLMLRDLGEHPEKVEGVGRLLFEMCKGVRNMFH
SCAETAMKLILLKLGPITEEEIELPWVAVGEAFEQMIRSAVVHIHKEHFNIVFKCLEESL
LDLQRKITKANCCVASEQMERILQAYLILTEHVNGSKISLPEDVCRVLIKMLQTPYLSSS
CCKTLLNTISTFLLAENVLLPDCLTKEAIEKVFASGFERCFLLDFSEAMFTVKQFERHFL
PCFLQYIEHCFSGTDTFTKDEAVAILAKLILVKAEPPTIGSMAFEKYPLVFTESSVSSNT
RQQTSKRQGEKAEVPVLDYVLSLIGLPEKEDITDLSQSWVALVVLPHIRPMHKENILPRV
TSFIDSLFTAIDRGSHCKGSLFVACQAVSTLLSLVESAEVLHLLPVERVKSLVTTFPSDP
SALLLADLYYTRLALCGCREPLSQGNLMDLFEKLYPNISTGVSKVRLLTIRILNHFDNPP
SRQIEGDSAGEFQPVFAILLQAELVPATVNDYREKLLHLRKLRCDIVQPAILSGSLQEVP
LRYLLGMLYINFSPLWDPVIELITSHAKEMENKQFWKVLYEHLERAATYAEMELQNELDE
QEESIAETESEKIPEGAVGTVFLEQLRSRTDCSERLDHTNYRFLLWKALDKFPDRVEPRS
RELSPLLLRFIRNEYYPADSLVAPSQDLRKKTSGAIAAKEIPREEVNDVAMEEEEEEEEE
EKEEGEPISVGLPKKKTRRAAAKQLIAHLQVFSKFSNPRALYLEQKLNALYTQLLSHQDQ
NVQRIALDCIMTYKHPHLLPYRENLQRLLEDKSFKEEIVHFSISEETAVVKAEHRPDLIP
VLMRILYGRMRNKTGSKTQGKSSASTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFSNG
PCQAAVLQSMSELDLAKVLPLGRQHSLFNGLEVVLKNMGHLIQQYLPEILQILLCMTAVV
SCILQQREKVQPRLINPLKNLRRLGLKLVAEFFSDHETYNFSVEEIDAVFHAVVWPQVCR
LASESQYSPTSLLKLIHTWSKNPRYFPLLAKQQPDHPECDILSNVFAVLSAKNLSEATSS
LVMDIADSLLNSPDFEPTEQVSSLNVTDCVVMITGDVTEESLSLGCRLVLPHVPAILQYF
SKTMLNVEKVKKKKYRAQVSKELSILSKISKFIQEKSQNSVLVSLLLPFLYQSNMEQGTE
IDILETVQNLLRHCANPTSFLKPLAKLFSVIQNKLSRNKLCLVFQTLSDLDSKLKYITDV
VKLNAFDQRHLDDIDFDVRLSAFQSITAHIKEMQTVDIDFLIPVMHNCFYTIQLGDMALS
DNASLCLTAFIHRLAEIDHTEDEYKELIQHTLLESVRRGLKSKTESIQQDYTSLLSCLIQ
TFPANPEFRDLVQLTNRHDPDMDFFENMKHMQIHRRARALRKLAKQLTEEKLVLSSKSLQ
NYVMPYATTAIFSEKMLKHENMVTASVEVVGAVCRHLSWSAYLYHLKHFIHVLQTGQISP
KLGVSLLETVLEAFHFDHKTLEKQLLTIDNREPAAMDLEPVVEAEEAMELEQSEGEEEAV
EEKNEKNLSEKPAEPEQAAETSENAEQGTKPVSFLPRNKEELECLIKHIQDTVTVNILPK
LHRCIVAKVKRDEEHKLVKSNVVNDDEVVRVPLAFAMVRMMQCLPKEVMEANLPSILLKV
CTFLRNRFQEIRDVARNTLTKIMEVLGVQYLLYILKEMQSALVHGYQLHVLTFTVNLLLK
GLTTRLSAGDLDPCLDILIEIFNQELFGNVAEEKEVKGIVSKVMEARKNKSYDSYEILGK
FIGRGQVTKLILPLKEILESTTSLKIVRKVHEALRHIMAGLIFNSDMNAESLLLLSHGLI
SENLPLLTEKAKKKVTPPPDPRLQPESCLLLQPTPMRGGQKAPVSSRTNTYILVDSGLRL
LHMSLKRSKVNSSEEHALEMLDPFVQLLIDCLKSMDVKVITGALQSLVWILKFPLPSIST
NMESLIKQLFLLLKEFAKTGIAKGQNFHLVVSCFKCVTMLVKNAKSQITSKQLQVLLGFA
EEDIYDSSRQATAFGLLKAILSRKLIVPEIDDVLQKVAQLAITGQSEPVRVQCRQIYLKY
ILDYPLGDKLKSNLDFMLAQLEYEYETGRESALEMIAYLLDMFPQDLLHKYCGLFFLSLC
MMMINDDSAKCKKMAALTCKSLLSKINNEKQDLMFSLVTEWFHSKKSTHRRLAAQACGLF
VEVNGVMFERRLEAVLTLIEKEINPSKFENITEEEEEKAADRLLFSFLVLVKKLITECNL
IQLTKNSDVVSNIWDHVQSHLWYPHTWVWLTATEIFGLLFASYKPEELVNKWKERKSEKR
KKAPAELSAATAFLTADLDKKMKELVFAFCHQLQSKFLDTSLGEQVIKNLLFVAKVVYLL
APASEEGKEAEELSCEVEEQEASEDEKDISAQGEDTQEKGHPATLLWLMKKLSVMAKREA
AYSPKVPLKRSCIFKFLGAISVDLGQDRIRPYLPTILTPLYRELNSNYAEQDPTLKNLSQ
EIIELLKKLVGLEAFSLAFSSVQKQANQKRAMRKKQRALQTVANPDIAARRKLKRHKNKA
ETRKRKIESLRPLHKAKRHRSHTLKDLAMVE
NT seq
8376 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaagcccgcagcccacaagtcggggaacacgcaccggtttcttaccttttcg
gagcgcttaagcaatattaatattgatattattcaccgtattgacagaactggaagttat
gctgaggaggttgaaacctactttttcgaaggactacggaaatggaaggagctgaacctc
actcagcattttgtgcaattctacaatgaagtggccaacaaatgccagtccttccaccag
ctggtctattaccaaagtgccattgtgcagagtttgaagacacatttgcaagttgaaggc
agtcttgcttaccaacccctgttaaatctagtagtgcagctggctcgagatcttcaggct
gacttctatcctcacttccatgactttttcctggccatcaccaagttactggatacacag
gacacagagctgctggaatgggcttttacctctctttcctatctctacaaatacttgtgg
agattaatggtgaaggacatacacaacatatacagcctgtacagcactctgttggctcac
cacaaactccacatcagaaactttgctgctgaaagttttgtctttctaatgagaaaggtt
tctgataaaaatgcactcttcaatttaatgctccgcgacctgggagagcaccctgaaaag
gtggaaggtgtaggacggctgctttttgagatgtgcaagggtgtccgaaacatgttccac
tcctgtgcagagacggctatgaagttaattctgttgaaactgggacctattacagaagag
gaaattgagctaccatgggtagctgttggagaagctttcgagcagatgatcagatcagct
gtagtgcatatccataaggagcattttaacattgtcttcaaatgcctggaggagtcactc
ttagacttgcagaggaaaataactaaggccaactgctgtgtggcttcagagcagatggaa
aggattctgcaagcttatctgatcctcacggaacatgtgaatggatccaaaatctcactg
cctgaagatgtgtgtcgggttttaataaaaatgttacaaacaccatatctctcatcatct
tgctgcaagacgctgctgaacaccatttctacattcctgctggctgagaatgttttgttg
cctgattgtttaaccaaggaagctattgagaaggtatttgcaagtggatttgaacggtgc
tttcttttggacttttctgaagcgatgtttacagtgaagcaatttgagaggcattttctc
ccatgctttctacaatacattgaacattgcttctctggcacagatacctttacaaaggac
gaggctgtggcaattctggctaaactcattttggtgaaagcagagcctcctaccattggt
tcaatggcatttgaaaagtatcctctcgttttcactgaatcgtctgtcagctcaaataca
aggcaacaaacaagtaaaagacaaggagaaaaggcagaagtgccagtgttggattacgta
ctatctttaatcggtttaccagagaaggaagacatcactgacctttcgcagtcttgggtt
gccttggttgtactgccacatatcagaccaatgcacaaagaaaacattctgcctcgtgtg
acaagttttatagattctctcttcacagccattgacagaggaagccactgcaaaggaagc
ctgtttgtggcctgccaagctgtaagtactcttcttagtttggtggagtccgctgaagta
ctccatttgttacctgtggagcgtgtcaagagcctggtgaccactttcccttcagacccc
tctgcattgctcttggctgatctctattacacgaggttggcattgtgtggctgccgggaa
cccctttcccaagggaacctaatggatttgtttgagaagttatatcctaatatttccact
ggtgtttccaaggttcggctgttgactattcgaattctaaaccattttgataatccgcct
tctagacagattgagggtgacagcgcaggggaattccagccagtatttgccatattgctc
caagcagaacttgtgccagcaacagtgaatgattacagagagaaacttctgcatttgagg
aaactaaggtgtgacatagtgcagcctgcaatactaagtggatctttgcaggaggtgcct
cttcggtatttactgggaatgctttatattaacttcagccctctctgggatcctgtaatt
gaactcataacttctcatgcaaaggaaatggagaataaacagttttggaaggtcttatat
gaacatttggagagggctgctacttatgctgaaatggagctacaaaatgaactagatgaa
caggaggagagcattgctgaaacagaaagcgagaagataccagaaggagcggtggggact
gtctttctggagcagctgaggagtagaacagattgcagtgaacggctggaccacacaaac
taccgttttctactgtggaaagcactggataaatttccagacagagtagagcctcggtcg
agggaactttccccacttcttttgagatttattcgaaatgagtactacccagcagattcc
ttagtggctccatctcaggatctcagaaagaaaactagtggtgccatagcagcaaaagaa
atacccagggaagaggtgaatgatgttgctatggaggaggaggaggaggaggaggaagaa
gaaaaggaagaaggggaaccgattagtgtaggactaccaaaaaagaaaacaagaagagct
gctgctaagcaactaatagcccacttacaagttttttctaaattctcaaatcctcgtgca
ttgtatctggagcagaagctgaacgcattatatacccagttactgtctcatcaagaccag
aatgtacaaagaatagctcttgactgtataatgacatacaagcatcctcatctactgcca
tacagggagaatttgcaaaggctactggaggacaagagttttaaagaagagatagtccat
ttcagtatttctgaggagactgcagtagtaaaagcagagcatcgaccagatctcatccct
gttcttatgagaattctctatggcagaatgagaaacaaaacagggagcaaaacacagggg
aagtcttcagcaagcactcgcatgtcaatcgttctgcgatttctcgccggctcgctgcca
gaagagatacggatgttcttggatctactctttgaagctgtaaagcaattcagtaatggg
ccttgccaggctgcagtcctgcaaagtatgtcagagctggatttagctaaagtcctgcct
cttgggcgtcagcatagcctcttcaatggtctggaagttgtgttgaaaaacatgggacat
ttgatccagcaatacctgcctgaaattctgcagattttgctctgcatgactgctgtggta
tcctgcatcctccagcaaagagagaaggtccaacctagattgattaatccactgaagaat
ttgagacgtcttggtctcaagcttgtggcagagtttttttctgatcatgagacctacaac
tttagtgtggaagagattgatgcagttttccatgcagtggtgtggcctcaggtctgcaga
ttggcttcagagagtcagtattctccaacttctctgctcaaactcattcacacttggagt
aagaatcccagatatttccccttgctggccaagcaacaaccagatcacccagagtgtgat
atactgtcaaatgtgtttgctgtgctgtcagccaagaacctgtctgaagccacatccagt
cttgtgatggacatagctgatagccttctcaacagcccagattttgaacccacggagcag
gtttccagtttgaacgtgactgactgtgttgtcatgatcactggagatgtgacagaagag
tccctcagccttggctgccgtttggttctgcctcacgttcctgccatacttcagtacttc
agcaaaacaatgttaaatgtggagaaggtgaaaaagaagaagtatagagctcaagtcagc
aaagagctgagtatactttccaagatcagcaaatttatacaagaaaagagtcagaattca
gtgcttgtgagcctcctcctcccttttctttaccagagtaacatggagcagggtacagag
attgacattctggagacagtgcagaacttgctgagacattgcgcaaaccctacaagcttt
ctcaaaccacttgcaaagcttttttctgtcatccagaacaaactgtctcgaaataagtta
tgcttggtatttcagactttatctgatttggacagtaaattgaagtacattactgatgtt
gttaagctaaatgcctttgatcaacgacatcttgatgatatcgacttcgatgtgcgtctg
tcggcgtttcagtccatcacagcccacatcaaggaaatgcaaacagtggatattgacttc
ctcatccctgttatgcacaactgcttctacaccatccagctaggggatatggctctcagt
gacaacgcaagcctttgcttgaccgctttcatccaccgactggcagaaattgaccacaca
gaagatgagtacaaggagctaatccagcacactctcctggagtctgtgagaaggggtctg
aagagtaagactgagagcatccaacaggactacacatcattgctttcctgcctcattcag
acattcccagcaaatcccgaattccgggatttggtgcagttgaccaaccgccatgatccc
gacatggacttctttgagaacatgaaacacatgcagatccacaggagggcacgagctctg
aggaaactggcaaagcaactcactgaagaaaagcttgtgctgtcttctaaatccctgcag
aactacgtcatgccttatgctacaactgccatttttagtgaaaaaatgcttaagcatgaa
aatatggtcacagcctcagttgaagttgttggagctgtctgccgacatctttcgtggtca
gcgtatttgtaccacttaaagcatttcatccacgtcctgcaaacaggacagatcagtccg
aagctgggagtcagcttgttagagacagtgctggaagcctttcactttgaccataaaaca
cttgaaaagcagcttttgaccattgacaaccgagaacctgctgccatggaccttgaaccg
gtggtggaggccgaagaagccatggaactggagcagagtgaaggggaagaggaagcagtt
gaagaaaagaatgaaaagaatctctctgagaagccagcagaacctgagcaagcagctgag
acatctgaaaatgctgaacaagggaccaaacctgtttctttcttaccccgaaataaagag
gagctggagtgcctgatcaaacacattcaagatacagttacagtcaacatcttgcctaaa
ttgcacaggtgtattgttgcaaaggttaaaagagatgaggaacacaagcttgtgaaatcc
aacgttgtgaatgatgatgaggtagttcgtgtcccattagcttttgcaatggtcaggatg
atgcagtgtcttcccaaagaagtgatggaagccaatctaccaagcatcctgctgaaagtc
tgcacgtttctgaggaacagatttcaggaaatacgggacgttgcccgtaacaccctcact
aaaatcatggaagtgttgggagtgcagtaccttctgtacatcttaaaagagatgcagtct
gctcttgtccatgggtaccagctccatgtgctgactttcactgtgaacctgttactgaag
ggccttactaccaggctcagtgctggtgatttggacccctgcttagatatactgattgag
attttcaaccaagagttgttcgggaatgtagctgaagagaaggaagtgaagggaattgtc
tccaaggttatggaagcacgcaaaaacaagagttatgattcctatgaaattcttggaaag
ttcattggaaggggtcaagtgacgaaacttattctgccactgaaagagattctggagagc
actacaagcttgaagatagtccggaaggtgcatgaggcactgcgccacatcatggcagga
ctgatcttcaattcagacatgaatgcagaatccctcctcctcctcagccatggacttatc
agtgaaaatttgcctctgctcactgagaaggctaagaaaaaagttacccctcctccagat
cctcggcttcaaccagagagctgcctgctgctccaacccactcccatgagaggagggcag
aaagcaccggtcagcagcaggaccaacacatatatcttggttgattcaggacttcggctg
ctgcacatgagcctgaagaggtccaaagtaaattcttctgaggaacatgctttggaaatg
ttagaccctttcgttcagctgcttatagactgcctgaaatctatggatgtcaaggtgata
actggtgctctgcagtccttggtatggattttaaagttccctttgccttctatcagtacg
aatatggagtcactgatcaagcagcttttcctcttgctgaaagagtttgccaaaacagga
atagccaaaggccagaatttccacctggttgtgagctgtttcaaatgtgtaacaatgctt
gtgaagaacgcaaagagtcagataacaagcaaacaactccaagtgttgcttggctttgct
gaagaagacatttatgattcatcacgccaagccactgcctttggccttctcaaggctatt
ttatccaggaagctgattgtccctgaaattgatgatgtgctgcagaaggttgcccagctg
gccatcacgggtcagagtgagccagtgcgagtccagtgcaggcagatttacttaaaatac
atcctggactaccccctcggtgacaaactgaaatcaaatttggatttcatgctcgcacag
ctagagtatgagtatgaaactgggagagaatctgcactggagatgattgcataccttctg
gacatgttcccacaggatctcctccacaaatactgcgggctgttttttctctctctttgt
atgatgatgataaacgatgattctgccaaatgcaaaaagatggcggctttgacgtgtaaa
tctcttctcagtaagatcaacaatgaaaaacaagatctgatgttttcactggtcacagag
tggtttcacagcaaaaagagcacacacaggagattggcagctcaggcgtgtggtttgttt
gttgaagtgaacggagtaatgtttgaacggcgtcttgaagcagtcctcactttgattgaa
aaagaaatcaacccaagtaaatttgaaaatataactgaagaggaggaggagaaggctgca
gataggctgctattcagctttcttgtgctggtaaaaaagctaatcacagagtgcaacttg
attcaattaaccaagaacagtgatgttgtgagcaatatctgggatcatgtccagtctcac
ctgtggtatcctcatacctgggtgtggctcacagccactgagatctttggcttgttgttt
gcatcttataagccagaagaacttgtcaacaagtggaaggagagaaagtcagagaagagg
aaaaaggcaccagcagaactgtctgcagccacagccttcttgactgctgacctggacaaa
aagatgaaagaacttgtgtttgcattctgccatcagctgcagtccaagttcctggacaca
tctctgggtgagcaggttataaagaatttgctttttgtggccaaagttgtttacttgctc
gcccctgcctcagaagaaggtaaagaggcagaagaactcagctgtgaagtggaagagcag
gaggcctcagaggatgagaaagatatttctgctcaaggagaggacacacaagagaaaggc
catccagccacactgctgtggttaatgaagaagctctctgtcatggccaagcgagaagca
gcatattcccctaaggtccctttgaagagaagctgcatctttaagttcctgggagcaatc
tcagtggatctgggacaagacaggatcaggccctaccttccaacaattctcacccctctg
tacagggagctgaacagcaactatgcagagcaagatccaacactgaagaacctttcccaa
gaaatcatagaacttctcaagaagttagtcggtctggaggctttttcgcttgccttttct
tctgtgcagaaacaggccaaccagaaaagagcaatgaggaaaaagcagagggctttgcag
actgtagcaaatcctgatattgctgcaaggaggaagctgaagagacataagaataaagca
gaaaccagaaagagaaaaatagaatccctgcgccctctgcacaaggccaagagacatcga
agtcatacactgaaagatttagcaatggtggaatga
DBGET
integrated database retrieval system
