Empidonax traillii (willow flycatcher): 114058676
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Entry
114058676 CDS
T05887
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
etl01002
]
114058676 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114058676 (USP4)
Enzymes [BR:
etl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114058676 (USP4)
Peptidases and inhibitors [BR:
etl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114058676 (USP4)
Ubiquitin system [BR:
etl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114058676 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Motif
Other DBs
NCBI-GeneID:
114058676
NCBI-ProteinID:
XP_027742019
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MLPKRQKGTECWQRSRPGEDPHGGSTPALSEPLPVPPQHGGRRHGARGPAHLSSRGARAR
ARGGARPSPLPALVPARTRARSDLRPRRVSRTDMAAAAGGAERARPDPAAQRAELGPLLA
TALRPGESWYLVESRWFKQWKKYVGFDNWEMFGAGDPSLFPGPVDNASLFPGPIDNSALF
DDPETQSLKEHLIDELDYVLVPTEAWNKLVAWYGCIDGQQPIVRKVVEYGLFVKHYKVEV
YLLELKLCESSDPDNVVSCHFSKADTVATIEKEMRKLFNIPAEKETRLWNRYMSNTYEQL
SKLDSTVQDAGLYQGQVVLIEVKNEDGTWPGQHFLAKSSTATSRNFTTSSKSSSSSYSSV
SATSVITNGDSSNSYGLNSSHLGRGGSGFVCNSYNCRDSASLSQPGLCGLSNLGNTCFMN
SALQCLSNTPPLTDYFLEDKYEAEINQNNPLGMRGEIAEAYAELIKQMWSGRQSHVAPRM
FKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSEVAKE
AWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCYLTLPLPLKRDRLMEVTLV
YADPQRRPVQYRIVVPMMGAISDLCESLSKLSGVPAENMVVTDVYNHRFHKVFQMDEGLN
HIMPKDDIFVYEVCKPSEDGSEYVTLSIYFREKTTRQSSNTAGTVLFGQPLLISVPKHKL
TVDHLYSVVLEQISRYVKLPLAEEYSTPCPDRGTCNGSNGVVEGDIEEMEHQDGGEEGKE
KLTEADPCHSEGCMQVEAARDLQPCKKQHFTFSLVNSSGTSEINSIVEGKILKLSAFSAV
AIDWDSDTRRLLYDEQEAQAFEKHGSMLQAQKKKAVVALRDCIELFTTMETLGEHDPWYC
PNCKKHQQATKKFDLWSLPKILVVHLKRFSYSRYWRDKLDTVVEFPIRGLNMSEFVCDPR
AGSYVYDLIAVSNHYGAMGVGHYTAYAKNKVNDKWYYFDDSSVSVASEDQIVTKAAYVLF
YQRRNNEEHSAPCPPQEECDGMDTN
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgaagagacaaaagggaacagagtgctggcagcgctcccggcccggagaggac
cctcatggcgggagcacccccgccctcagcgagcccctcccggtaccgccccaacatggc
ggccgccgccacggcgcgcgcggccccgcccacctctcgtcacggggcgcgcgcgcgcgc
gcgcgaggcggggcccgtccctcccctctccccgcgctcgtgcccgcgcgaacgcgcgcg
cgctccgacctccgcccgcgccgggtctcgcgcacggacatggcggcggccgcgggcggc
gcggagcgggcccggccggacccggcggcgcagcgggcggagctggggccgctcctggcc
acggccctccggcccggggagtcctggtacctggtggagagccggtggtttaagcagtgg
aagaagtatgtgggcttcgacaactgggagatgttcggcgcgggcgatcccagcctgttc
ccggggcccgtggacaacgcgagcctcttcccggggcccatcgacaactcggccctgttc
gacgatccggaaactcagagtttgaaagaacacctcattgatgagctggattacgtgttg
gtgcccaccgaagcctggaacaaactggtagcgtggtatgggtgcatagacgggcagcag
cctattgtgaggaaagtggtggagtacgggctgtttgtgaagcactacaaggttgaagtt
tatctgctggagctgaagctatgcgagagcagcgaccccgacaacgtcgtcagctgccac
ttcagcaaagcagatactgtggctaccatcgagaaagaaatgagaaaactatttaatatc
ccagctgagaaggaaaccaggttatggaacaggtatatgagtaacacctacgagcagctc
agcaagctggatagcacagtgcaagatgcagggctctatcagggtcaggtggttctaata
gaagtgaaaaatgaagatggcacgtggcctggacagcatttcctggcaaaatcaagcact
gcaactagcagaaactttactacctcttcaaaatcatcatcaagttcttattcctcagtg
tctgccacttctgtcattactaacggtgatagcagtaactcctatggactgaacagctcc
cacctgggcaggggaggttctggatttgtctgtaactcttacaactgcagggacagtgct
tccctgtcacagcctggactttgtggactcagtaaccttggaaacacctgcttcatgaat
tctgcattacagtgtctgagcaatactcctcctctgactgattatttcctggaagataaa
tatgaagctgagataaatcagaacaacccactggggatgaggggggagattgcagaagcc
tacgcggagctcattaaacagatgtggtctgggagacagtcccacgtggccccacggatg
tttaaaacacaggttggccgatttgctcctcagttttcgggataccagcagcaagattcc
caggagctcttggcttttcttctagatggcttgcatgaggatttgaacagagtgaagaaa
aagccctacttggagctgaaggatgccaatggcagacctgattcggaggtggcaaaagag
gcctgggagaatcacaggctgaggaacgattctatcattgtggatatttttcatggtctt
ttcaagtctacccttgtttgtcccaaatgctccaaagtttctgtgacctttgatcccttc
tgttacttaaccctcccactgcccttgaagagggatcgtctcatggaagttaccctggta
tatgcagacccacagcgtagacctgtccagtaccggattgtggtgccgatgatgggggcc
atctcggatctgtgtgaatccctttccaaactctctggtgttcctgcagaaaatatggtg
gtgacagatgtgtataatcaccggtttcacaaagtcttccaaatggatgaaggtttaaat
catatcatgccaaaagacgacatctttgtgtatgaagtttgcaagccaagtgaggacggc
tcagagtacgttactctctctatttacttccgggagaagacaacaagacaatccagcaac
actgcagggactgtgctctttgggcagccactgctcatatctgtgcccaaacacaagctc
actgtggatcacctctacagtgtggttttggaacagatcagccgctacgtgaaactccct
ttggcagaagaatattccacaccctgcccagacagaggaacctgcaacggctccaatggg
gtggttgaaggtgacattgaagagatggagcatcaggatggtggagaggaaggcaaggaa
aagctgactgaagctgatccctgccactctgagggttgtatgcaggtggaggcagcaaga
gacctgcagccttgcaagaaacagcatttcacttttagccttgtgaattcctctgggacc
tctgagataaactccattgttgaaggaaaaatcttaaaactgagtgctttttctgcagtt
gctattgactgggattctgatacacggaggctactttatgatgaacaggaggcacaggca
tttgaaaaacatggcagcatgctacaagcacagaagaagaaggctgtagtggccctcaga
gactgcatagagctcttcactactatggaaacacttggtgaacatgacccgtggtactgc
cctaactgtaagaagcatcaacaggccacaaagaagtttgacctgtggtctttgcccaag
attttggtggtgcatttaaaacgcttctcatacagcagatactggagggataaacttgac
actgttgtggaattccctatcaggggcttaaacatgtccgagtttgtctgcgacccgaga
gcaggctcgtatgtgtatgacctcattgcagtttccaatcactatggagccatgggagtg
ggccactacactgcctacgccaagaataaagtgaatgacaaatggtactacttcgatgac
agcagcgtatcggtggcttcagaagaccaaatagtgacaaaggctgcgtatgtgctgttt
tatcagcgccgaaacaatgaggaacatagtgccccatgtcctccccaagaagagtgtgac
ggcatggacaccaactaa
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integrated database retrieval system
