Empidonax traillii (willow flycatcher): 114058764
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Entry
114058764 CDS
T05887
Symbol
TRAIP
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114058764 (TRAIP)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114058764 (TRAIP)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114058764 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-C3HC4_3
Latarcin
zf-C3HC4_4
zf-ANAPC11
RINGv
HIP1_clath_bdg
zf_RING_Vps8
zf-RING_16
zf-RING-like
Zn_ribbon_8
Prok-RING_1
zf-RING_Vps41
FANCL_C
zf-Nse
DUF5305
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
114058764
NCBI-ProteinID:
XP_027742232
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MPIRAHCTICSDFFDNERDVAAVPCGHTFHRLCLIQWFDTAPSRTCPQCRIQVSKRHIIN
KLFFDVALEEQAAPDAETLQNELDKVKAQLSMKEKEKRECQAVVDGLRDTLDVRNATIES
LQKVLGETEMLCSSLKKQMKFLEQQQEDNRSSKEEARRLRNKLRTMERIELLLQSQRPEV
EEMIREMGVGQAAVEQLAIYCVSLKKEYENLKEARKVSVEMTEKLKKELFSVNNKLQKTT
LDLEKTQEELESTQKDLKNADKEILSLKKKIDILQDTLKVPSVTRETLSRLVFESPVPVE
LRHPKLHRPAHSDEINLDATFDVDTPEHQPCTSPFSPAKRQKLDKRPPPVVNLAKKVLKE
TVENWADDVEDDALKGLMPTFIRNSVLCKKPPLGSLLGPHKNRGMVRTGYDGMGGRTKFI
QPTNLAEIRPLAVKSKKKVSRPASAAASTSSSSSSQARLDSFLQ
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccgcgcccactgcaccatctgctccgacttcttcgataacgagcgggacgtg
gcggccgtgccttgcgggcacactttccaccggctctgcctcatccagtggtttgacacc
gcaccgagccggacgtgcccgcagtgcaggatccaggtcagcaaaagacacatcatcaat
aagctgttttttgatgttgccctggaggagcaggcagcaccggatgcagagaccttgcag
aatgaactggacaaggtgaaggctcagctctccatgaaagagaaggaaaagcgagaatgc
caggctgttgtggatgggctgagggacactctggatgtgcgcaacgccacgatagagtcg
ctccagaaggtgctgggagagacagagatgctgtgctcctctctcaagaagcagatgaaa
ttcctagagcagcagcaggaggataacagaagttcaaaggaggaggcccgccgtctgcgg
aacaagctgagaaccatggagcggattgagcttttgcttcagagccagcgccccgaagtg
gaggagatgatcagagagatgggagtcgggcaggcagcagttgaacagcttgcaatctat
tgtgtctcactgaaaaaggaatatgagaacttaaaggaggctcggaaggtctctgttgag
atgacagagaagctgaagaaggaactgttttctgtcaataacaagctgcagaaaacgact
ttagacttggagaagacgcaggaggagttagaaagcacccagaaggatctgaagaatgca
gacaaagagatcttgagtttgaagaagaagatagacatcttgcaggatactctgaaggtc
ccatctgtaaccagagagacactcagtcgcctagtctttgagagccccgttcccgtggaa
ctgcggcacccgaagctgcaccgcccggcccacagcgatgagatcaacctagatgccact
tttgatgtggacacccctgagcatcagccctgcacatcccccttcagccctgcaaaaagg
cagaagctggataaaaggccgcctcccgtggtaaatctggcgaagaaagttctgaaggaa
acagtggagaactgggcagatgatgtggaggacgatgctcttaaaggactcatgccaaca
ttcatcaggaactctgttctctgcaagaagccgcctttgggcagcttgctgggtccccac
aagaataggggcatggtgaggacagggtacgacggcatgggaggcagaacaaagttcata
cagcctacaaacctggcggaaatccgtccgttagcagtgaagagcaagaagaaggtgtcc
aggccagcatctgcagctgcttccacatcttcctccagcagcagccaggccagactggac
agtttcctgcagtga
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