Empidonax traillii (willow flycatcher): 114058833
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Entry
114058833 CDS
T05887
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03420
Nucleotide excision repair
etl04115
p53 signaling pathway
etl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114058833 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
114058833 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
114058833 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114058833 (DDB2)
03400 DNA repair and recombination proteins [BR:
etl03400
]
114058833 (DDB2)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114058833 (DDB2)
DNA repair and recombination proteins [BR:
etl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
114058833 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
114058833
NCBI-ProteinID:
XP_027742399
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAPVNQPKDKEYERVYQHWPEEAKSAGKRKPDYEKLGNETQAKKLFVRKTSKPPGKIGWS
GGGSVVGNKSVLSHQLEQQRSIVHYVYQNMLGGSIRAPLRQCLQLPFLRSLASYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGAGDSLGDIKFSPY
EAVKLYVASGDGTLSLQDLESRAVQVISRAPDCGHEHHNVCCWYCSVDVSASSRAVVTGD
NVGNVVLLSTSGEEIWKLKLHKKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKMS
FLHVLPHEKPVNAAYFSPTDGAKLLSTDQRNEIRVYSSSDWTKPQHLIPHPHRHFQHLTP
IKATWHPRYDLIVVGRYPDPKFPEYTMDELRTVDVFDGNTGEMVCQLHDPNACGIISLNK
FNPMGDTLASGTGFNILIWSREEMVAKKQEHLLKAMTEQGIGSWSSSRRGGQRQANPGTS
KLKAKLLSWELEETRTKNSDSKSKGRKRKGKDLEK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccagccaaaggacaaggagtatgagagggtgtatcagcattggcca
gaggaggcaaaatcggctgggaagaggaaaccggactatgagaaactagggaatgagaca
caagcaaagaagttgttcgtgagaaaaacatctaaacccccagggaaaatcggttggagt
ggaggtgggtctgtggtgggaaacaagagcgtcctttcccatcagctggagcagcagcgc
agcattgttcattatgtctatcagaacatgctgggaggctccattcgggcaccactcagg
cagtgtctgcagctgccttttctgcgttctcttgcctcataccgcctctttcgaacagca
agtccttttgacaggagagtgacatgcttggaatggcatccaacacaccccagtacagta
gctgttggttccaaaggtggagacatcatcctttgggactatgaagtactcactaaaacg
tgcttcataaaggggaaaggggctggagattctcttggagacatcaagttcagtccttat
gaggcagtgaagctttatgtggcatcgggtgatggcaccctaagtctgcaggaccttgag
agcagagcggtgcaggtgatctctcgtgccccggactgtggccacgagcaccataatgtt
tgctgctggtactgcagtgtggatgtttctgcaagcagccgtgcagtggtgacaggtgat
aatgtgggcaacgtggtcctgctcagcacttctggtgaagagatttggaagctgaaattg
cacaagaagaaagtgactcatgtagagttcaactcccgatgtgagtggctgttggccaca
gcatctgtggatcagacagttaaaatctgggacctcagaaacatcaaaaacaaaatgagc
tttcttcatgtgcttcctcatgagaaacctgtcaatgcagcttacttcagcccaacagat
ggtgcaaagcttctgagcacagaccagcgcaatgagatcagggtttactcatcttcagac
tggaccaagccacagcatctgattccacatccacataggcattttcagcacctcacacct
attaaggccacatggcatcctcgctatgacctcattgtcgtaggtcgctacccagacccc
aagttcccagagtacacaatggatgagctacgaactgttgatgtattcgacggaaacacc
ggagagatggtttgccagctccatgatccaaatgcttgtggtatcatctcgctcaataaa
tttaaccctatgggagacacactggcttctggcacgggctttaatattctgatttggagc
cgggaggagatggtggccaagaagcaagaacatcttttgaaagccatgacagaacagggg
attggaagctggagttcatccagacgtggagggcagaggcaggcgaaccctggcacaagc
aaactcaaagctaagttattgtcttgggagctggaggagacaagaacaaaaaacagtgat
tctaaatccaagggaagaaagcgaaaagggaaggatctagagaagtga
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integrated database retrieval system
