Empidonax traillii (willow flycatcher): 114058835
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Entry
114058835 CDS
T05887
Symbol
TDRD6
Name
(RefSeq) tudor domain-containing protein 6 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etl03036
]
114058835 (TDRD6)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
114058835 (TDRD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
SGF29_Tudor
DUF4537
Motif
Other DBs
NCBI-GeneID:
114058835
NCBI-ProteinID:
XP_027742403
LinkDB
All DBs
Position
Unknown
AA seq
2289 aa
AA seq
DB search
MSAGPGPLGRGDAVTLRVRAVGLRPDVPVLRLWGLLGERKADYARLDREVQAAAGPRLAA
RPGPGGQADGGAGLCPGEVGLVEVLGLWYRCCVVSCSAQGYRVFLLDEGSVVVTSAYYLA
RGCPELFQLPPEVLGCVVANVMPSQAPEGPGCGDSPVSKWTVEAMEFLSFLHNKEVSGVV
QEVMSPQLIVLELPQLVAQMRQLGLARQVSPVWFCQVLRRCLPFGHLKKQLWQQQQPSMC
SLGAFAVPQLLHVLFSDWPVSPALDYFYPQLQLGVTEPVLVTHVSDPHHIYCQLQCLSQE
IRCLSDTMCHVYDQWEQDLLPKVGSPCAARGMDGQWYRGLLLELIAGEQDQQAALVIFVD
YGRKETVTRANLRHLPAECFRMPVVTYVCALQGVSDGGCGWSSSQIDMLKALVQGRGVSA
HINTFNSFEHLYYVTLYGENSINLNHLFRSQACCLVSSCKQVSQTEAREHLEVEESSAGE
LELPSEALPVLTHRDLGSAAVPGVQLKTCVFYSAQVSYLRDPSEFWLQVHEHQQLFRQLR
QCMWNFYSHATKLDGAEWDPRPGSLCCASGNEGGFYRAMVTRVLDSGVEIHLVDRGSTET
VDRCAVKELLSRFRELPALALKCCLAGVSPLRGSWSEASVSAFREMVLNKALKVCFLSLK
GDKYMVEIFDQTQLGEKRVSKLMAQGGYGEYQRCEIPKTLQNSDEKAVAQASFLASSAEE
KQINAEKRLRESPVAAIHSSKSSESLPVQEYKGKGNLHMSWRQNYVEIKPGYSCGGHLEV
GSTVSVILSYVENPGFFWCQLSRNSRDLELLMDEIQEHCKNSSQPHVWPNLVCLAQYSED
KKWYRALIVSGALCAEKVEVVYVDYGNREQVCLSNLRAVHERFLRLEAQAFRCSLYNLIQ
PNGENPFTWEEAAINTFQQFVVNSSSEMELKCTIFALASINRDLFNIVDLITPFQSACQF
LTERGVARPLFPQKHLASLVQLHSYYYSSHGIKIGSEEEVYITHVEDPWTFYCQLERCAD
TLAQLADNISRLSETMTSTGTLRKSGSLCLAKYADSQWYRGVIMETQPKAKVFFVDFGNT
ETIEKDDLLPLPSDASDILLVPMQAIKCSISDVSSVSKEAATWFKEAVLERRLKAIVVAK
DSDNTLLVELFDSNTQINTKLKELSLNNTRLCSHVEGESRCSRNADVNDTAVSPLNVGRP
PERQKYGPEAQGGQGSKRHFEEDVNLFQPSSKGDLAAGLLESDEMLSSKKDAILLNKAGK
ASLLSVQMDALSDNKSGAEDRCVMLKNVSDLPQQKIVPALKTLVYVSFINDPLDFYVQLG
SDEVQLNSILESLNNGTQAKNPCGELFQAGDLISAVYSEDSLWYRAVVKEKTSDNSMKVH
YIDYGDTSVIRVHQARRLPEALSSIPAISIHCFLGGLKCKKNTDWAEKAVLYFTKRTSEI
LLSCEFVEKVEDKWEVILSDHQGIITVDLPNDLASAERSCSSDKTDKRENMITAHEPLSP
QAPNEISCDCKSFIWKFPEAGQTLKIYVTVVNGPEYFWCHSADTEQLSYIDQKIEEAEKL
GLSSLNDGRMSCIKSGHTCLAKYSQDGWFYRAQISSVKGDSVVVQHVDYGSQEAVGLEMV
RQIPRELLRVPGQAFACCLSGFSPSEGSWLSEANQKFYNMTADLVLEAEVVEIWKDKDSE
VPLCVVKLEASGNSINEAMKPFWKANKGTGNSASSSLDSLLKENRSSNSDMGLCLERETT
AVCGLAQKGSDLLRSDPFLDMTSECLETAEANVSVRSASGNTDDDCETPEHQNSFDKEIP
LSEGDSGNSVLLEPMRCCSPHISGGEMTASEQELSEVLFGEDAEQQAELTGSASAASLFL
GNKPEELQQLQVVQAQPSSRDGTLVELDPLEMHYSYDDLKEFLLDLEALSAKSFSEETKE
ALDTKSLEMQTASGSEARETVLEQELLELPVGSEETGELAALNFLEILTLLNEKENLVPS
VSDGKKSVEQIPPDVQPFLGGNPKKLKVNLSGIHQAEDLLGEWMEADPPLLRLSSSADRP
EKELDLKTHDKQSMVGAKLGHFLELVLPDVQPSQEGREEDFLELEHAVLQSSANSGSQLS
FLTKDSVDQRPVFPVKSCDYKVKKRKGWQKQQDDCMEEWMEQDLTDSFKECGNMHVQSSG
CKSEDEDEEKQNENLTDCSAAHPDYPCNLKGFAVGSKCVVWTSLQWCEARILEISEKGTR
VLNLSSGNEEIVDPENVWNGIPDSACRSPEALTPATENLQSLPEEPLLHEKQTGCSCDLV
EDTHVLQHC
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgggccggggccgctcggccgcggcgacgccgtcaccctgcgcgtccgcgcc
gtggggctgcgccccgacgtgcccgtcctgaggctctgggggctgctgggcgagcgcaag
gcagactacgcccgcctcgaccgcgaggtgcaggcggcggcggggccgcgcctggcggcc
cgccccgggcccggcgggcaggcagacggaggggccgggctgtgccctggtgaggtggga
ctcgtggaggtgctggggctctggtaccgctgctgcgtggtgagttgcagcgcccagggg
taccgcgtgttcctgctggacgaggggtccgtagtggtcacgtccgcctattacctggca
cggggctgcccggagctgttccagttgcccccggaggtgctgggctgtgtcgtggccaat
gtcatgccctcccaagcccccgagggcccgggctgcggggactcgccggtctccaagtgg
acggtggaggcgatggagttcctcagcttcctgcacaacaaggaggtgtctggtgtggtg
caggaggtgatgtccccgcagctcatcgtgcttgagctgcctcagcttgtggcccagatg
cggcagctgggcttggccaggcaggtctctcctgtctggttctgccaggtgctcaggcgc
tgcctgccttttggccacctaaagaagcagctctggcagcagcagcagccctcgatgtgt
tcccttggagcttttgcagtgcctcagctcctccacgtgctgttctcagattggcccgtg
tcacctgccttggattacttctacccacagcttcagctgggtgtgacagagcctgtccta
gtgacccatgtctccgacccacaccacatctactgtcagttgcaatgcctgtcccaggag
atccgttgcctttctgataccatgtgccatgtttatgaccagtgggagcaggatttattg
cccaaagtgggctcaccctgtgcagcccgtggcatggatggccagtggtaccgtggcctt
ctgctggagctcattgcaggggagcaggaccagcaggcagctctcgtgatctttgtggac
tatggcaggaaggagactgtcaccagagctaacctgcgccatttgcctgccgagtgtttt
cggatgcctgtggtgacttatgtgtgtgctcttcagggtgtttcggatgggggctgtgga
tggtcctcgtcgcagatcgatatgctgaaagcgctggtgcaaggcagaggagtgagtgct
cacatcaacacctttaactcctttgagcatctctattatgtgaccctgtatggggaaaac
agcatcaacttgaaccatcttttcaggtctcaggcttgctgcctggtcagcagttgtaag
caggttagccaaactgaggctcgtgagcatctggaagtagaagaatcctcagctggagaa
ttggaattgccatcagaagcacttcctgttttaacacacagagatttgggctctgctgct
gtacctggtgtacagctgaagacctgtgtgttctacagtgcacaggtctcctacctccga
gatccatctgagttctggctgcaggtccatgagcatcagcagctcttcaggcagctgagg
cagtgcatgtggaatttctactcccatgctacaaagctggatggtgctgagtgggaccca
cgccctggatccctttgttgtgccagtgggaacgagggtggcttttatcgagcgatggtc
accagggtgctggacagtggggtggaaatacacctggtggacaggggcagtacggaaacc
gtggatcggtgtgcggtgaaggagctgctctctcggttcagggaactgcctgctctagct
ctgaagtgttgtttggcaggtgtctcccctctgagagggagttggagtgaagcttctgtg
tctgcattcagggagatggtgctgaacaaggcactgaaggtttgttttttgagtttgaag
ggtgacaaatacatggttgaaatttttgaccagacccagttaggagagaaaagagtaagt
aaactcatggcccagggaggttatggtgaataccagaggtgtgaaatacccaagactctc
cagaattcagatgaaaaggctgtggcacaggcctctttcctagcaagtagtgctgaggaa
aaacaaataaatgcagagaagaggctcagagagagccctgttgcagccattcacagttct
aaaagtagcgaatctcttcctgttcaggaatataagggcaagggaaacctgcacatgtct
tggagacagaattatgtggaaattaagccaggttattcttgtggaggccacttagaagtg
ggaagtaccgttagtgttattttgtcatatgttgaaaatcctggttttttctggtgtcag
ttgagcagaaatagccgtgaccttgagttactaatggatgaaattcaggagcactgtaag
aattcatcccagccacatgtttggccaaatcttgtgtgtttagcccagtactcagaggat
aagaaatggtacagggctttaattgttagtggagccctttgtgcagaaaaagtagaagtc
gtctatgttgactatggcaacagagagcaggtgtgcctgtcaaacctccgtgcagttcat
gagcgcttccttaggttggaggctcaggctttcaggtgcagcctttacaacttaatccaa
cccaatggggagaatccattcacttgggaagaagcagcgattaatacttttcagcagttt
gttgttaattcatcatctgaaatggaactaaagtgtacaatatttgccttggcttcaata
aatagggacctgtttaacattgtagatttaatcacaccttttcagagtgcttgccaattt
ctgaccgagagaggtgtagccagacctttatttcctcaaaagcatctggcatccttggtt
cagcttcattcttactattattctagtcatggtatcaaaattgggagcgaggaagaagtt
tatattacacacgttgaggatccatggacgttttactgccagcttgaaagatgtgcagat
accttagcacagttggctgataacatcagtcgcctgagtgaaacaatgaccagcacggga
accttgagaaagtctgggagcttgtgcctagcaaagtatgctgacagtcagtggtacagg
ggagtaattatggaaacacaacctaaggcaaaagtcttctttgtggattttgggaacaca
gagaccatagagaaagatgatctgcttcctttacccagtgatgcttctgatatcctgctt
gtgccaatgcaggccataaagtgttccatatctgatgtatcttctgtttccaaagaagct
gcaacatggtttaaggaagctgtccttgaaaggcgattaaaagcaatagtagtagcaaag
gactctgataatacactgctggttgagttgtttgatagtaatactcaaattaataccaaa
ctgaaggagctaagcctaaacaacacaagactgtgtagtcatgtagaaggtgagtctcgg
tgctctagaaatgcagatgtgaatgacactgcagtgtcccctttaaatgtggggaggcct
cctgaaagacaaaaatatggacctgaagctcagggaggacaagggagcaaaaggcacttt
gaagaagatgtaaaccttttccagccctctagcaagggtgatctggcagctggattacta
gaatctgatgaaatgcttagcagtaaaaaggatgctattttgttaaataaagcagggaag
gcgtctctgctctctgtccagatggatgcactgtcagataataaatctggtgctgaggac
aggtgtgtaatgcttaaaaatgtgtcagacctaccacaacagaagatagtgccagctctt
aaaacgttagtgtatgtgtcttttatcaatgatccactggatttttatgttcaactaggg
agtgatgaggttcagcttaacagcattttggaaagtttaaacaatgggacacaagcaaag
aacccttgtggagaacttttccaagcaggagacttaatcagtgctgtttattcagaagac
agcctgtggtatagagctgtagtaaaagagaagacttctgacaattcgatgaaggtacat
tatattgattatggtgatacttcagtaattagagttcatcaagcacgcaggctccctgag
gccttgtcatctattccagcaataagcattcactgcttcctaggtggacttaaatgcaaa
aaaaatacagactgggcggagaaagcagtgctttacttcaccaagagaacaagtgaaatc
ctgctgtcatgtgaatttgtagagaaggttgaggataaatgggaagttattctcagtgac
catcaaggtataataacagtggatttacctaatgatcttgcaagtgcagagagatcttgt
tcatctgacaaaactgataaaagagagaacatgataactgcacatgagcctttgtctcct
caggcgccaaatgagatttcctgtgattgtaaatcatttatatggaagtttccagaggca
ggtcagactttaaaaatttatgtcacggtggtaaatggcccagaatacttctggtgtcac
agtgctgataccgaacagttgagctacattgaccaaaaaatagaggaagctgaaaagctt
ggactgagctctttgaatgatggcagaatgtcttgtattaaaagtggtcatacttgtcta
gcaaaatacagtcaagatggatggttctacagagctcaaatcagcagtgtaaaaggtgac
agtgtagttgttcaacatgtagattatggaagccaggaagctgttggcttggagatggtc
cgacagattccacgtgaactgctcagagtacctggtcaagcatttgcttgctgtctgtca
ggtttcagtccctcagagggctcatggcttagtgaagcaaatcagaagttttataatatg
actgcagaccttgtattagaagctgaagtagtagaaatttggaaagataaagattctgaa
gttcctctgtgtgttgtcaagctggaagcttctggcaatagcattaatgaagcgatgaag
cctttttggaaggccaataaaggaactggtaacagcgcttcttcaagtcttgacagcctc
ttaaaggaaaacagaagttcaaacagcgatatgggtctttgtcttgaaagagaaactact
gctgtttgcggattagctcagaaaggaagtgatttgcttcgttctgatcctttcctggat
atgacttcggagtgcttagaaactgcagaagcaaatgtgtcagtgagatctgccagtggg
aatactgatgatgactgtgaaacaccagagcatcagaacagttttgataaagagatacct
ctgtctgaaggcgatagtggtaacagtgtgttactagaaccaatgagatgctgcagccct
catatttcagggggtgaaatgacagcttcagaacaagaactgtctgaagtactctttgga
gaggatgctgagcagcaagcagaactgacaggcagtgcttcagcagccagcctctttcta
ggaaacaaaccagaagagctgcagcaattgcaagtggtccaggcacagccgtcttccaga
gatggaacgttagtggaactggatccattagaaatgcactattcgtatgatgatctaaaa
gagttcctgctggatctagaggcactttcagccaagtccttcagtgaagaaacaaaggaa
gccctggacacaaagtcacttgaaatgcagacagcatcaggcagtgaagcgagagagaca
gtgttggaacaggaattgctggagctgccagttggtagcgaggagacaggggagttggca
gctctgaactttcttgaaattttaacattacttaatgagaaagaaaacctggtgccttca
gtcagtgatggaaagaagtcagtagagcaaattccgcctgatgttcagccttttttggga
gggaacccaaagaaactgaaagtgaatttgtctgggattcatcaggcagaagatctacta
ggtgagtggatggaagcagaccctcctctcctaaggctgtcatcgtctgctgatagacct
gagaaagaactggatctgaagacccatgacaagcagtcaatggtaggtgccaagttgggg
cattttctggaactggtgctgcctgatgtccaaccttctcaggaaggcagggaggaggac
tttttagagttggaacatgctgtgctgcagagttctgcaaatagtggaagtcaactttca
tttctcacaaaagactcggtggatcagaggcctgttttccctgtaaaatcatgtgactac
aaagttaagaaacgtaaggggtggcagaagcagcaagatgattgtatggaagagtggatg
gaacaagacttgactgactcatttaaagagtgtggaaatatgcatgtgcagtcttcaggc
tgtaagtctgaggatgaagacgaagaaaagcaaaatgagaacttgactgactgcagtgca
gcacaccctgactatccttgtaatctgaagggctttgctgttggttccaaatgtgtagtg
tggacctctctccagtggtgtgaggctcgcattttggagatatctgaaaaaggtactagg
gtcttgaatctctccagtggcaacgaggagattgtggatcctgagaatgtctggaatggt
attcctgactcggcttgcagatcacctgaggcattaacccctgcaacagagaacttgcag
tccttaccagaggagcccttacttcacgaaaagcaaaccggctgcagttgtgatttagtt
gaagatactcatgtcctccagcattgctga
DBGET
integrated database retrieval system
