KEGG   Empidonax traillii (willow flycatcher): 114058892
Entry
114058892         CDS       T05887                                 
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
etl  Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:etl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:etl03019]
    114058892 (ZC3H12A)
Messenger RNA biogenesis [BR:etl03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     114058892 (ZC3H12A)
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_2 zf-CCCH zf-CCCH_4
Other DBs
NCBI-GeneID: 114058892
NCBI-ProteinID: XP_027742510
LinkDB
Position
Unknown
AA seq 633 aa
MSAGSVAPGWPEALPGAARPAAGMSGRESPEGPGDGPELQLKVDFFRKLGYSSEEIRVVL
QKLGLGADTNTVLGELVKHGPAERDGPEAAPEPGEAPLVPRGGTGTKSPAPGPEETESDN
LKPIVIDGSNVAMSHGNKEVFSCRGILLAVQWFWDRGHKDITVFVPSWRKEQPRPDVLIT
DQYILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAHESDGIVVSNDTYRDLQNERP
EWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVVPEHKKQQCPYGKKCTY
GIKCKFYHPERINQPQRSLADELRANARLSPTRSTSAKEEKKGKRGSQAELLCSVPTESD
KSSLQKVSAERKSLAHKAKPSDVPLQAKGCVSGSVPPNSGSHRSSDRYQQPHMDSLSYIS
QERLDSGIGSLENQLSDMWPHRCTSHCDHSHAEQVPVCTCGRQRAAYPHSPSLEQNGLVS
YKHSSHKSSSSGASFLQYSPEVSHSGAPHSFSGYGVPVHPSSAGQFSLPGEFSAPPPPSR
DFWSEPYPLPQVRSPGAHDPRALQRGLGPAYGDSGPWAGSEQFAEERASVHVKLCGIFHP
HLVDAVMSRFPRLLDPQRLAAEILTYKAQNPGM
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgagcgcgggcagcgtcgccccgggctggcctgaggcgctgccgggcgcggcccggccc
gcggcggggatgagcggcagggagagccccgaggggcccggggacggccccgagctgcag
ctgaaggtggatttcttccgcaagctcggctactcctcggaggagatccgcgtcgtgctg
cagaagctgggcctgggcgccgacaccaacacggtgctgggggagctggtgaagcacggc
ccggccgagcgggacggccccgaggccgcgcccgagcccggcgaggccccgctggtcccc
cgggggggcaccggcaccaagtcccccgcgcccggccccgaggagaccgagagcgacaac
ctgaagcccatcgtcatcgatggcagcaacgtggccatgagccatggcaataaagaagtg
ttctcctgccgaggtatccttctggctgtccagtggttctgggacaggggacacaaggat
attacagtctttgtgccgtcatggaggaaggagcaaccccgaccagatgtactcataaca
gaccagtacatcctccgtgacctggagaagaagaagatcctggtgttcacgccgtcccgg
cgggtcgggggcaagcgcgtggtgtgctacgacgaccggttcatcgtcaagttggcccac
gagtccgacggcatcgtcgtgtccaatgacacctaccgggacctgcagaacgagcggccc
gagtggaagaaattcatcgaggagcggctgctgatgtattccttcgtcaatgacaagttt
atgcctccggatgatcccttagggcgtcatggccccagcctggacaacttcctcaggaag
aaacctgtggtgccagaacacaagaaacagcagtgcccttatgggaagaaatgcacttat
ggaattaagtgtaagttctaccaccctgaaaggatcaaccagccccagcgctcgttagct
gatgagctccgtgccaacgcaaggctgtctccaaccagaagcaccagtgccaaggaggag
aaaaagggcaaaagaggctcccaggcagagctcttgtgctcggtgcccacggagagtgac
aaaagctctttgcagaaggtctctgcagagaggaagagcttggcccacaaagccaagccc
agcgatgttcccctccaggccaaaggctgtgtgtcgggcagtgtccccccgaacagtggg
agccacaggtcctctgacaggtaccaacagcctcacatggactctctgtcttacatctct
caggagcgtcttgactcaggcatcggttctctggagaaccagctgtctgacatgtggcct
cacagatgtaccagtcactgtgatcactcccatgctgagcaggtgcctgtctgcacctgt
ggcaggcagagagctgcctacccacattctcccagcttagagcagaacggtctggtctcc
tacaagcacagctcccataaatcctcctcctctggtgctagcttcctgcagtacagccct
gaggtctctcactcgggagccccccactctttctcaggctatggagtacctgtgcacccg
agcagtgcggggcagttcagcctgcccggtgagttcagtgcccccccgcccccctcgcgg
gacttctggtcagagccgtacccgctgcctcaggtgagatcccccggggcccacgacccc
cgggcgctgcagaggggcctgggcccggcctacggggactcggggccgtgggctggctcg
gagcagttcgcagaggagcgggccagcgtgcacgtcaagctgtgcggcatcttccacccc
cacctggtggatgcagtgatgagccgcttcccgcgcctgctggacccccagcgcctggct
gccgagatcctcacctacaaggctcagaacccgggcatgtga

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