Empidonax traillii (willow flycatcher): 114058892
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Entry
114058892 CDS
T05887
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114058892 (ZC3H12A)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
114058892 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
114058892
NCBI-ProteinID:
XP_027742510
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MSAGSVAPGWPEALPGAARPAAGMSGRESPEGPGDGPELQLKVDFFRKLGYSSEEIRVVL
QKLGLGADTNTVLGELVKHGPAERDGPEAAPEPGEAPLVPRGGTGTKSPAPGPEETESDN
LKPIVIDGSNVAMSHGNKEVFSCRGILLAVQWFWDRGHKDITVFVPSWRKEQPRPDVLIT
DQYILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAHESDGIVVSNDTYRDLQNERP
EWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVVPEHKKQQCPYGKKCTY
GIKCKFYHPERINQPQRSLADELRANARLSPTRSTSAKEEKKGKRGSQAELLCSVPTESD
KSSLQKVSAERKSLAHKAKPSDVPLQAKGCVSGSVPPNSGSHRSSDRYQQPHMDSLSYIS
QERLDSGIGSLENQLSDMWPHRCTSHCDHSHAEQVPVCTCGRQRAAYPHSPSLEQNGLVS
YKHSSHKSSSSGASFLQYSPEVSHSGAPHSFSGYGVPVHPSSAGQFSLPGEFSAPPPPSR
DFWSEPYPLPQVRSPGAHDPRALQRGLGPAYGDSGPWAGSEQFAEERASVHVKLCGIFHP
HLVDAVMSRFPRLLDPQRLAAEILTYKAQNPGM
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggcagcgtcgccccgggctggcctgaggcgctgccgggcgcggcccggccc
gcggcggggatgagcggcagggagagccccgaggggcccggggacggccccgagctgcag
ctgaaggtggatttcttccgcaagctcggctactcctcggaggagatccgcgtcgtgctg
cagaagctgggcctgggcgccgacaccaacacggtgctgggggagctggtgaagcacggc
ccggccgagcgggacggccccgaggccgcgcccgagcccggcgaggccccgctggtcccc
cgggggggcaccggcaccaagtcccccgcgcccggccccgaggagaccgagagcgacaac
ctgaagcccatcgtcatcgatggcagcaacgtggccatgagccatggcaataaagaagtg
ttctcctgccgaggtatccttctggctgtccagtggttctgggacaggggacacaaggat
attacagtctttgtgccgtcatggaggaaggagcaaccccgaccagatgtactcataaca
gaccagtacatcctccgtgacctggagaagaagaagatcctggtgttcacgccgtcccgg
cgggtcgggggcaagcgcgtggtgtgctacgacgaccggttcatcgtcaagttggcccac
gagtccgacggcatcgtcgtgtccaatgacacctaccgggacctgcagaacgagcggccc
gagtggaagaaattcatcgaggagcggctgctgatgtattccttcgtcaatgacaagttt
atgcctccggatgatcccttagggcgtcatggccccagcctggacaacttcctcaggaag
aaacctgtggtgccagaacacaagaaacagcagtgcccttatgggaagaaatgcacttat
ggaattaagtgtaagttctaccaccctgaaaggatcaaccagccccagcgctcgttagct
gatgagctccgtgccaacgcaaggctgtctccaaccagaagcaccagtgccaaggaggag
aaaaagggcaaaagaggctcccaggcagagctcttgtgctcggtgcccacggagagtgac
aaaagctctttgcagaaggtctctgcagagaggaagagcttggcccacaaagccaagccc
agcgatgttcccctccaggccaaaggctgtgtgtcgggcagtgtccccccgaacagtggg
agccacaggtcctctgacaggtaccaacagcctcacatggactctctgtcttacatctct
caggagcgtcttgactcaggcatcggttctctggagaaccagctgtctgacatgtggcct
cacagatgtaccagtcactgtgatcactcccatgctgagcaggtgcctgtctgcacctgt
ggcaggcagagagctgcctacccacattctcccagcttagagcagaacggtctggtctcc
tacaagcacagctcccataaatcctcctcctctggtgctagcttcctgcagtacagccct
gaggtctctcactcgggagccccccactctttctcaggctatggagtacctgtgcacccg
agcagtgcggggcagttcagcctgcccggtgagttcagtgcccccccgcccccctcgcgg
gacttctggtcagagccgtacccgctgcctcaggtgagatcccccggggcccacgacccc
cgggcgctgcagaggggcctgggcccggcctacggggactcggggccgtgggctggctcg
gagcagttcgcagaggagcgggccagcgtgcacgtcaagctgtgcggcatcttccacccc
cacctggtggatgcagtgatgagccgcttcccgcgcctgctggacccccagcgcctggct
gccgagatcctcacctacaaggctcagaacccgggcatgtga
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