Empidonax traillii (willow flycatcher): 114059109
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Entry
114059109 CDS
T05887
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114059109 (NOTCH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
Gurken_M
cEGF
Motif
Other DBs
NCBI-GeneID:
114059109
NCBI-ProteinID:
XP_027742954
LinkDB
All DBs
Position
Unknown
AA seq
2552 aa
AA seq
DB search
MERLLAPGLLVLLLPALTRGLRCTQLAESCLNGGKCETFPNGTEVCQCSGAYVGERCQLP
NPCLSSPCKNAGTCTAVVRGSTVDYTCACRLGFTDELCLTPRDNVCLSNPCRNGGTCDLL
TLNEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYICRCTAGFHGANCKQDVN
ECSISPPVCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQIGDTT
YDCTCLPGFTGQNCEENINDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFHGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECTEGFTGTHCEIDIDECDPDPCHYGTCKDSIASFTCLCQPGYTGHRC
DININECQSQPCKNGGTCQDRNNAYNCICLKGTTGPNCEINLDDCASNPCDYGKCIDKIN
SYECTCEPGYTGRMCNVNIDECASNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNEC
NSNPCIHGKCHDGLNGYKCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGSPCKN
GGECRESEDYKSFSCSCPPGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCACRTGFS
GRNCDTDIDDCKPNPCHNGGSCSDGIGTFFCECLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCVCLPGFTGSYCEH
NINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCKDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISMHKSSKCMCAPAFTG
PECQYPASSPCTSNPCYNGGTCEFFGDASPYYRCNCPANFNGLNCHILDFDFQGGIGQDI
IPPKIEEKCEIAVCAGYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYY
GNEEELKKHYIKRSTEDWSDMSSAVINKVKSSLYPRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPATNSQLYPMYVVV
AALVLLAFIGLGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAVNN
VEAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPNSYIGNLKPAVQGKKARKP
STKGLSCNGKDAKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHMSINHLNMAGKQDMAMGNSSRMAFDSVPPRLSHLPVSSPS
TVMSSAPMSFSVGGAAGLNGQCDWLTRLQNGMVQSQYNPLRGNIQPGAHQQPQNLQHGMM
TSLHNGLPTTSLSQMMSYQAMPSTRLASQPHLMQSQQLQQMQQQQLQQQNLQPPQQQPQQ
QPQQPPPPPQQPQQHHNPGSNGSGHLGQNFLGTELSQPDMQPVSGSAMAVHTILPQDSQM
LPTSLPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSS
SPHSNVSDWSEGISSPPTSMQSQMGHIPEAFK
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctcctggcgcccggcctcctggtgctcctgctgcccgccctgacgcgaggt
ttacggtgcacgcagctcgccgaatcctgcctcaacgggggcaagtgcgaaacttttccc
aacgggacggaggtgtgccagtgtagcggtgcctatgtgggcgagcggtgccagctgccc
aacccctgcctgagctccccctgcaagaacgccggcacctgcaccgcggtggtgcgcggc
agcaccgtggattacacctgcgcctgccgcctgggcttcaccgacgagctgtgcctgacg
ccccgtgacaacgtctgcctcagcaacccctgccggaacgggggcacctgtgacctgctg
acgctcaacgagtacaagtgccgctgcccgccggggtggtcaggcaaaacctgccagcag
gccgacccctgcgcctccaacccctgcgccaacgggggccagtgcgtgcccttcgaagcc
cactacatctgccgctgcaccgccggcttccacggcgccaactgcaagcaggacgtcaac
gagtgcagcatctccccgcccgtctgcaagaacgggggcagctgcaccaacgaggtgggc
acctaccagtgctcctgcaagccggcctacaccgggcagaactgcgagcacctctacgtg
ccctgcaacccctcgccctgccagaacgggggcacctgccgccagatcggagacaccacc
tacgactgcacctgcctgccagggttcacgggtcagaactgtgaggaaaacatcaacgac
tgcccgggcaacaactgcaagaatgggggcacctgtgtggacggcgtcaacacctacaac
tgccagtgcccgcccgagtggacaggtcagtactgcactgaggacgtggacgagtgccag
ctgatgcccaacgcctgccagaacggcggcacctgccacaacaaccacggcggctacaac
tgcgtctgtgtcaacggctggacgggcgaggactgcagcgagaacatcgacgactgcgcc
atggccgcctgcttccacggggccacctgccacgaccgggtggcctccttctactgcgag
tgcccccacggccgcacaggtttgctgtgccacctggacgacgcctgcatcagcaacccc
tgcaacgagggctccaactgcgacaccaaccccgtcaatggcaaagccatctgcacgtgc
ccctcggggtacatggggccagcctgcaaccaggatgtggacgagtgctcgctgggagcc
aacccatgtgagcacgcagggaagtgcatcaacacccaagggtccttccagtgtcagtgt
ctgcagggctactcaggccctcgctgcgagatcgatgtcaacgagtgtctctccaacccc
tgccagaacgatgccacctgcctggaccagatcggggagttccagtgcatctgcatgccc
ggttatgagggggtttactgtgagatcaacacggatgagtgcgccagcagcccctgcctg
cacaacggcaactgcctcgacaagatcaacgagttccactgcgagtgccccactggtttc
aacgggcacctgtgccagtttgacatcgatgagtgcgccagcaccccctgcaagaacggc
gccaagtgcgtggacggccccaacacctacagctgcgagtgcaccgaaggtttcacgggc
actcactgcgagatcgacatcgatgagtgtgaccccgacccgtgtcactacgggacctgc
aaggacagcatcgcctccttcacctgcctctgccagcccggctacaccggccaccgctgc
gacatcaacatcaacgagtgccagagccagccctgcaaaaatggggggacctgccaggac
aggaacaacgcctacaactgcatctgcctcaaagggaccacgggacccaactgtgagatc
aacctggacgactgcgccagcaacccctgcgactacggcaagtgcatcgacaagatcaac
agctacgagtgcacctgcgagccggggtacacagggcgcatgtgcaacgtcaacatcgac
gagtgtgccagcaacccctgccacaatgggggcacgtgcaaggatggcatcaacggcttc
acctgcctctgccccgagggcttccacgaccccaagtgcctgtccgaagtgaatgagtgc
aacagcaacccctgcatccatgggaaatgccatgatggattgaatggctacaagtgtgac
tgtgacccaggctggagtgggaccaactgcgacattaacaacaacgagtgtgaatccaat
ccctgcatgaacggtggcacctgcaaggacatgaccagcggctacatctgcacctgcagg
gagggcttcagcggccccaactgccagaccaatatcaatgaatgtgcttccaacccctgc
ctgaaccagggcacgtgcatcgacgatgtcgctggctacacctgcaactgcctcctgccc
tacacaggagccacctgtgaggatgtgctggccccctgcgctggcagcccctgcaagaac
ggtggcgagtgccgggagtcggaagattacaagagcttctcctgcagttgtccccctggc
tggcaaggtcagacctgtgagattgacatcaatgagtgtgtgaagagcccgtgccggaac
ggggccacgtgccagaacaccaacgggagctaccgctgcgcctgcaggaccggcttctcc
ggccgcaactgcgacaccgacatcgacgactgcaagcccaacccatgccacaacggtggc
tcctgctctgatggcattggcacgttcttctgcgagtgcctggctggtttccgtgggccc
aagtgcgaggaggacatcaatgagtgcgccagcaacccctgcaagaacggggccaattgc
accgactgtgtcaacagctacacctgcacctgcccctctggcttcagcggcatccactgc
gagaacaacacacccgactgcacggagagctcctgcttcaacggtgggacctgcgtggat
ggcatcaacaccttcacctgcgtctgcctgcccggcttcacgggcagctactgcgagcac
aacatcaatgagtgcgactccaagccgtgcctgaacgggggcacgtgtcaggacagctac
gggacgtacaagtgcacttgtccccagggatacaccgggctcaactgccagaacctggtg
cgctggtgtgactcctctccctgcaaaaacgggggcaagtgctggcagaccaacaacctg
taccgctgcgagtgcaacagcggctggacagggctctactgcgacgtccccagtgtgtcc
tgcgaggtggctgccaagcagcaaggtatcgatgtagcacatctctgcaggaactcgggg
ctctgtgtcgacactggcaacactcacttctgccgctgccaggctggctacaccggcagc
tactgtgaggagcaggtggacgagtgctcccccaacccctgccagaatggagccacctgc
acagactacctggggggctactcctgtgagtgtgtggctggttatcatggagttaactgc
tcagaggagatcaatgagtgcttgtcccacccgtgccagaacggaggaacctgcatcgat
ctcatcaatacctacaaatgctcctgccccagaggaacccaaggggtgcactgtgagatc
aatgtggatgactgcagccctttctttgatcctgtcaccctggggcccaagtgctttaac
aatggcaagtgcaaggatcgggtagggggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagacgtcaatgagtgcctgtccaacccctgcgacgcccgcggc
acccagaactgcgtgcagcgggtcaacgactacaaatgcgagtgcaggcctggctatgca
ggccgtcgctgtgacacggtggtggacgggtgtaaaggcaaaccctgcaggaatggtggg
acgtgtgctgttgccagcaatactggccgtggcttcatctgcaagtgccccccgggattc
gtgggtgccacctgcgagaacgactcccgcacgtgtgggaacctgcactgcctgaacggc
ggcacctgcatctccatgcacaagagctccaagtgcatgtgcgcgccagccttcacgggc
cccgagtgccagtacccggccagcagcccctgcacgtccaacccctgctacaacgggggc
acctgcgagttcttcggcgacgcctccccctactaccgctgcaactgccccgccaacttc
aacggcctcaactgccacatcctcgacttcgatttccagggtgggatcgggcaggacatc
atcccgcccaaaatcgaggagaagtgcgagatcgcggtctgcgcgggctacgccggcaac
aagatctgcgacggcaagtgcaacaaccacgcctgcggctgggatgggggcgactgctcc
ctcaacttcaacgacccctggaagaactgctcccagtccctgcagtgctggaagtatttc
aacgatggcaagtgtgattcccagtgcaataacgctggctgcctctacgatggatttgac
tgccagaaatacgaggggcagtgcaaccctctgtacgaccagtactgcaaagatcacttc
tcagatggccactgcgaccagggctgcaacaactttgagtgcgaatgggatggtctggac
tgtgcaaacaacatgccagagaagctggcagatggcacactggtggtggtggtcctcatc
accccagagaacctgaagaacaactctttcaacttcctgagggagctgagccgagtgctg
cacaccaacgtggtcttcaagaagaaccccaagggggagtatatgatctttccgtattat
ggcaatgaggaggagctgaaaaaacactacatcaagaggtccacagaggactggtcagat
atgtccagtgctgtcatcaacaaagtgaagagcagcctctacccccgggctggcaggagg
cagaagagggagctcgatcagatggacatcagaggatccatcgtctacttggaaattgat
aaccgccagtgcatccagtcgtcttcccagtgcttccagagtgcaactgatgtggcagcg
ttcctgggtgccttggcctcccttggcaacctgaacataccctacaaaatagaagctgtt
aaaagtgaaacagctgagcctgcgacgaactcccagctatatcctatgtacgtggtggtg
gctgcactggtcttgcttgctttcattggactgggagtgctggtgtctcgtaagcggcgc
agggagcatgggcagctttggttcccagaaggcttcaaagtgacggagtcgagcaagaag
aagcggcgagaaccactcggggaggactctgttggactgaaacccctcaaaaatgcttcg
gacggcacgctgatggatgacaaccaaaatgagtggggtgacgaggagaccttggacacc
aagaagttcaggttcgaggagcaggcgatgctgccggacacggacgaccagacggatcac
aggcagtggacccagcagcacctggatgccgctgacctgcgcatctcctccatggccccc
acccctccacagggggagatcgatgccgactgcatggacgtcaacgtcagagggccggat
ggcttcacccccctcatgatcgcctcgtgcagcggaggagggctggagactggcaacagc
gaggaggaggacgacgctcccgccgtcatctcggatttcatttaccaaggcgccagcctg
cacaaccagacggaccgcacgggcgagacggcgctgcacctggccgccaggtactcccgc
tctgacgctgccaagcgcctgctggaggccagcgccgatgccaacatccaggataacatg
ggccggacgcccctccacgccgccgtctcggccgatgcccaaggagtcttccagatcctg
atcaggaacagggcaacagacctcgatgcccggatgcacgacgggaccactcctctgatc
ctggctgctcgcttggccgtggagggaatgctggacgacctcatcaactgccacgcagac
gtcaacgccgtggatgatctaggcaagtcagccctgcactgggcagctgctgtgaataat
gttgaggctgcagtggtcctcctgaagaatggtgccaataaggacatgcagaacaataag
gaggagaccccactgttcctcgcagccagggaagggagctacgaaaccgccaaggtcctg
ctggaccactttgccaaccgggacatcacggaccacatggaccgcctgccgcgggacatc
gcccaggagcgcatgcaccacgacatcgtgaggctgctggacgagtacaacctggtgagg
agccccccgctgcacaacggccccctgggagcgcccaccctgtcccccccgctctgctcc
cccaacagctacatcggcaacctcaaacccgccgtccagggcaagaaggccaggaagccg
agcaccaagggcctgagctgcaacggcaaggatgccaaagacctcaaagcccggaggaaa
aaatcccaggacgggaaaggatgtctgctggacaactccagcgtgttgtccccagtggac
tccctggagtcgccccatgggtacctctcagacgtggcctctcctccgctgatgacctcc
ccgtttcagcagtccccttccatgcccctgaaccacctgccgggcatgccggatgcccac
atgagcatcaaccacctcaacatggcggggaagcaggatatggccatggggaactccagc
aggatggccttcgactcggtgccgccgcgcctctcgcacctgccggtgtccagccccagc
acggtgatgagcagcgccccgatgagcttctccgtcggcggagcggccgggctgaacggg
cagtgtgactggctcaccaggctgcagaacgggatggtgcagagccagtacaaccccctg
aggggcaacatccaacccggggcgcaccagcagccccaaaacctccagcacggcatgatg
acctccctgcacaacggcctgcccaccaccagcttgtcgcagatgatgagctaccaggcc
atgcccagcacccggctggcgtcccagccccacctgatgcagagccagcagctccagcag
atgcagcagcagcagctccagcagcagaacctgcagccgccgcagcagcagccccagcag
cagccccagcagccaccgccaccaccgcagcagccgcagcagcaccacaaccccggctcc
aacgggagcggccacctgggccagaatttcctcggtacggagctgagccagcccgacatg
cagccggtgagcggcagcgccatggcagtgcacaccatcctgccccaggattcccagatg
ctgcccacgtccctgccctcctccctcgcccagcccatgaccaccacgcagttcctaacc
ccgccttcccagcacagttattcctcccccttggacaacacccccagccatcagctccag
gtgcccgaccaccccttcctcacgccctctccggagtcgccggaccagtggtccagctcg
tctcctcattccaacgtgtccgactggtccgagggcatctccagccctcctacgagtatg
cagtcacagatgggacacatccccgaggccttcaagtga
DBGET
integrated database retrieval system
