Empidonax traillii (willow flycatcher): 114059180
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Entry
114059180 CDS
T05887
Symbol
HNRNPU
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U isoform X1
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114059180 (HNRNPU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etl03041
]
114059180 (HNRNPU)
Spliceosome [BR:
etl03041
]
Common components
Common spliceosomal components
hnRNP proteins
114059180 (HNRNPU)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
SRP54
Motif
Other DBs
NCBI-GeneID:
114059180
NCBI-ProteinID:
XP_027743134
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MSCSPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDQEEAGGGGPASGAAEPG
NGSVEGEAAESGGGAAQLRQGGGPGQAAASAMEDDDEEGLEAADGDAMELGEENGERAGA
GGGPMEEEAGGEEEEEEEEEDENGDDQGFQEGEDELADEEEAVPGDANGHGDQQPPQPQQ
LQQPPPLLPPRGAAAAKEAPGKSAGDASGPAAAAASGPAGPAKQQQQQKKAEGGGGRPGA
QGAGGDGKMEQKPGEKKRGVKRPREDHGRGYFEYIEENKYSRAKSPQPPVEEEDEHFDDT
VVCLDTYNCDLHFKISRDRFSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPV
KHLYTKDIDIHEVRVGWSLNTSGMLLGEEEFSYGYSLKGIKTCNCETEDFGEKFDENDVI
GCFANFDGDEVELSYSKNGQELGVAFKISKEVLDGRPLFPHVLCHNCAVEFNFGQKEEPY
FPVPEEYTFIQKVPLEDRVRGPKGPEQKKDCEVVMMIGLPGAGKTTWVTKHAAANPGKYN
ILGTNTIMDKMMVAGFKRQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQTNVSA
AAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGNFTLPEVA
ECFDEIIYVELQKEEAQKLLEQYKEESKKALPPEKKQNTGSKKNKKSNKNQFNRGQRGRG
GFNMRGNFRGGVPGNRGGYNRRGGNMPQRGGGGGGGGGGSSGAIGYPYPRGPVFPSRGGY
SNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQWQQGQFWGQKPWSQHYHQGYY
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgagctgctcgcccgtgaacgtgaagaagctgaaggtgtcggagctgaaggaggagctg
aaaaagcggcgcctctccgacaagggcctcaaggccgagctcatggagcggctccaggcc
gcgcttgaccaggaggaggccggcgggggcggccctgccagcggcgcggccgagcccggc
aacggcagcgtggagggggaggcggccgagagcggcggaggcgccgcgcagctccgccag
gggggaggccccggccaggccgcggcctccgccatggaggacgacgacgaggaagggctg
gaggccgccgatggcgacgccatggagctgggcgaggagaacggcgagcgggcgggggcc
gggggcggccccatggaggaggaggcgggcggcgaggaggaggaagaggaggaggaggag
gatgagaacggcgacgaccagggattccaagagggggaggacgagctggccgacgaggag
gaggccgtgcccggagacgccaacgggcacggcgaccagcagccgccacagccccagcag
ctgcagcagcccccgccgctcctcccgccgcgcggcgccgccgccgccaaggaagccccg
ggcaagagcgccggggacgcctcggggcccgccgcggccgctgcctccggcccggcgggc
cccgccaagcagcagcagcagcagaagaaagcggaaggcggcggcggccgccccggggct
cagggcgccgggggagatggtaaaatggaacaaaaacctggtgagaagaagagaggagtg
aaaagaccacgtgaagaccatggccgtggatatttcgaatacattgaggaaaataagtat
agcagggccaagtcccctcagccacctgttgaagaagaagatgaacattttgatgacaca
gtggtttgtcttgatacttataactgtgacctgcattttaaaatctcaagagaccggttt
agtgcttcctctctgaccatggaaagctttgctttcctttgggctggagggagagcctcc
tatggagtttctaaaggcaaagtctgctttgagatgaaggttactgaaaagattcctgtt
aaacacctgtatacaaaagacattgacatacatgaagtgcgagttggctggtcactgaac
acaagtggaatgttgcttggtgaagaagaattttcttatgggtattctctaaaaggaata
aagacttgcaattgtgagactgaagactttggtgagaagtttgatgaaaatgatgtgatt
ggatgttttgctaattttgatggtgatgaagtggaactctcatattccaagaatggacaa
gagcttggtgttgcattcaaaataagcaaggaagttcttgatgggcgaccactctttcca
catgttctctgccataactgtgcagttgagtttaactttggtcagaaggaggaaccttac
tttcctgttcctgaagagtataccttcatccagaaggtccccctggaggatagggtccga
ggaccaaagggacctgagcaaaagaaagattgtgaggtggtgatgatgattggtttgcct
ggggctggcaagactacatgggttaccaaacatgcagcagcaaatcctgggaaatacaac
attcttgggacaaatactattatggacaaaatgatggttgcaggttttaagcgtcagatg
gcagacactgggaaacttaacacactgttgcagagagctccgcagtgtcttgggaagttc
attgagattgcagctcgtaagaagcggaatttcattttggatcagacaaatgtgtctgca
gctgcgcagaggagaaaaatgtgcctgtttgcaggcttccagcgcaaagcagttgttgtt
tgcccaaaagatgaagactacaagcaaagaacacaaaagaaggcagaggtggagggaaaa
gatcttccagagcatgcagttctcaaaatgaaagggaacttcacactgccagaggtagca
gaatgttttgatgaaataatctatgtagagttgcaaaaagaagaagctcagaagcttttg
gaacagtacaaagaagaaagtaagaaagctcttccgccagaaaagaaacagaacactggc
tcaaagaagaacaagaagagcaataaaaatcagtttaataggggtcagagaggacgtgga
ggattcaacatgcggggcaacttcagaggaggagtccctggcaatcgtggtggatacaac
agaaggggaggcaacatgcctcagcgaggtggtggaggtggcggtggtggcggtggcagc
agcggtgcgattggctacccgtatcctcgcggccctgtctttccaagcagaggtggctac
tcaaacagaggaaactataacagaggtggaatgcccaacagggggaactacaaccagaac
ttcagaggaaggggaaataatcgtggctacaaaaaccaatctcagggctacaaccagtgg
cagcagggtcaattctggggtcagaagccatggagtcagcattatcaccaaggatattat
tga
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