Empidonax traillii (willow flycatcher): 114059192
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Entry
114059192 CDS
T05887
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114059192 (ZC3H12D)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
114059192 (ZC3H12D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
zf-CCCH_4
zf-CCCH_2
zf-CCCH
HTH_70
Regnase_1_C
Motif
Other DBs
NCBI-GeneID:
114059192
NCBI-ProteinID:
XP_027743174
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MQMPAKMAVAGSISSKPVPPHSKKVSAAGVEVNQSKLDLFCKLGYGKQDICKVLENLGPE
ALEDDVLKELIRMGSKPQAVENQAQPSPLKLVARGSCSTTPGLKRLGEDESDSSDSLRPI
VIDGSNVAMSHGNKLVFSCWGIQLAVDWFRQRGHTYIKVFVPLWRKEPPRQDSPIADQHI
LEELEKQSILVYTPSRKVKGKRVVCYDDRYIVKVAYEKDGVIVSNDHYRDLQNENPEWKW
FIEQRLLMYSFVCNRFMPPDDPLGRHGPTLDNFLSKKPVLPEKKLQPCPYGKKCTYGNKC
KFYHPERLRQAQLSVADELRAKTKVLLTLGKEEDRWNCSPYKSRGEPAPCEACAETLQEA
RGCVGPSSCSERSQRSCPEQISTAWAGGPSSDLGLDQCLPQPEPLQDQPLLEQMSAMAIG
KGTYSYDWSIQTSRDREVMDNPHRRDDLRHKLFSLHHPHSLDHSCPPGRPFQQTALPPAP
GGMCPEHSWPRECCGTHGTGQRSCYVPDGARHKQALGTQQRVLLQSTVLPPDVLHLYSEH
QLQQQQQQRSPSQPSRQPFLLDSSNRPGFFQEALAYPSASYSDYWPTPAERPTSAQQVNI
HRELCSLFPYSEMNQVMTLYPDIKDKGTGTPPL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgcctgctaagatggcagtggccggttcaatttctagcaaaccggtcccacca
cactccaaaaaagtgtctgcagcaggggtggaagtgaaccagagcaagctggatcttttc
tgcaagctgggctatggtaagcaggacatctgcaaagtgctggagaacctgggcccagag
gcccttgaggatgatgtcttgaaagaactgattcgcatggggagtaaacctcaagctgtg
gagaaccaggctcagccttccccactaaaacttgttgcccgtgggtcatgtagcactaca
ccggggttgaagcgacttggagaagacgaaagtgattcttccgattccttgagacccatt
gtgattgatggcagcaatgttgcaatgagccatggaaacaaattggtattctcctgctgg
gggatccagctggcggtggattggtttcggcagagggggcacacatacatcaaggttttt
gtcccactctggagaaaggagccccctcgacaagacagtcccattgcagatcaacacatt
cttgaagagcttgaaaagcaatcgatccttgtctacacaccctctcggaaggtgaaaggc
aagagggtagtttgctacgatgatcgatacatagtgaaagtggcttatgagaaagatgga
gtcattgtttccaatgaccactaccgggatctccaaaatgaaaaccctgaatggaaatgg
tttattgagcagcgactactcatgtactcttttgtctgtaacaggtttatgcctcctgat
gatccgttaggccggcatggacctactcttgataacttcctcagcaaaaagccagtgctt
cctgaaaaaaaattgcagccttgcccctatggtaaaaaatgcacctatggcaataaatgc
aaattttaccatccagagagactacgtcaagctcagctttcagttgctgatgagctcagg
gccaaaacaaaggtcctgttaaccctggggaaagaggaggatagatggaactgctcaccg
tacaagagcagaggagagcctgcaccctgtgaagcctgcgcagaaactctgcaagaagcc
agaggttgtgtagggccttcctcctgctcagagaggtcccagaggagctgtcctgagcag
atatccaccgcctgggctggcggtcccagctctgacctggggctggaccagtgcttgcca
cagccagagccactgcaagatcagccactcctggagcagatgtcagccatggccattggc
aaaggcacctacagctatgactggtccatacaaacctctcgggacagggaggtgatggac
aaccctcatcgccgcgatgacctcaggcacaagctgttctcacttcaccaccctcacagc
ttggaccacagctgcccaccagggcgccctttccagcaaacagctctcccccctgcgccg
ggcgggatgtgcccagagcacagctggcctcgggagtgctgcggcacgcacggaacggga
cagaggagctgctacgtccctgatggtgctcgacacaaacaggccctggggactcagcag
cgtgttttgctgcagtccacagttcttccccctgacgtgcttcacttgtacagcgagcat
cagctgcagcagcagcagcagcagcgttcccccagccagccctcacggcagccctttctg
ttggactccagcaacagaccgggcttcttccaggaagcccttgcataccccagtgcctct
tacagtgactactggcccaccccagctgaaaggccaacctctgcccagcaagtaaacata
cacagggagctgtgctccctttttccttacagtgagatgaaccaggtcatgactttgtac
cctgacatcaaggataaggggactggcactcctcccctatga
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