Empidonax traillii (willow flycatcher): 114059315
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Entry
114059315 CDS
T05887
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04140
Autophagy - animal
etl04148
Efferocytosis
etl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114059315 (VPS18)
04148 Efferocytosis
114059315 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114059315 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114059315 (VPS18)
Membrane trafficking [BR:
etl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114059315 (VPS18)
Hops complex
114059315 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_2
Nup54_57_C
DUF2229
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
114059315
NCBI-ProteinID:
XP_027743403
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLHRSASLQQSRASVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTILRIDLGKPDEPNQVELGRKDEARVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTSQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAMHADHLPSFREFPANLGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGLLTCMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKSHHRPKDADTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcctggacgagtacgaggattccctgcaccgctccgcctccctgcagcag
agccgcgccagcgtgggcatcccgcactccggatatgtgaatgcacgactggagaaggaa
acgccaatatttaacaagcaaaggattgattttgctcctccagagaaaatcaacagctta
gtggtctcctctaaccagctctgtatgagccttggcaaagacaccattctcaggattgat
cttgggaagccagatgaacccaatcaggtagagctgggacgcaaagatgaagccagagtc
tacaagatgtttctggaccacacaggctcccatctcctgattgctctgaacaccagtgaa
tgcctttacctgaacagaagtgttcagaaagtgcgggcgctctcccgctggaaaggacac
ttgattgaaagtgtgggctggaacaaatttcttggttcagagaccaacactgggcccatc
ctggtggggacatcccaggggcagatctatgaggctgaaatctctgtcagcgaaggaagc
ctcttcagcactaaccctgaccagtacttccgacaggtctacactctggaggaggaatca
ggacctgccccagtctgctgcttggagattgaacgagggatagaagggaaattttttatt
atagcaaccactaggaagaggctcttccagtttgttggcaaagtgcctgaaggaacagag
cagcaaggcttcagctccatatttgctatgcatgctgaccatttgcccagctttcgggag
tttccagccaacttgggattcagtgagatagccttttacactccaaaactgcgttccaac
ccacgctcctttgcctggatgatgggaaatggtgttttatatggtacattggattatagt
cgtcccgattccattttgagtgatgaacgggtctgggtttatccttctgatattgacata
actgtgaacaagcccatatccattgtacttacccagttccatttccttttgctgctgcct
gaccgggtgaaggctgtatgtactctgaatgggcaggttgttttccaagatctcttcctg
gagaagtttggcctgctgacgtgcatgatcaaagatcccacagtccagcagatatggatc
cacactgagaaagtagtgtttcgctaccatgtccaacgggaatctagagatgtgtggaag
atgtatatgaacatgaacaaatttgatttagctaaagaatattgcaaggaccgtccggag
tgtctagatattgtactggcaaaggaggcagagcactgtttccaaaacaagagatatcta
gacagtgccaaatgttacgcactgacccagaactactttgaggaaattgctctgaagttc
attgaagccaagcaagaggaggccctgatggagtttctgattaagaagctaagtaaccta
aaaccttcagagaagacacagaccactctgctgaccacgtggttgacagaactgtacctg
aactggttaggtatattggaaggagatccctcccaacgaaatctctacttggatacacgg
gagaagtttcgcactttcttgagcagtcctaaaaacaaagactgtctttttaataatcgg
gcatctatttacgagctgttggcaagccatggcgacacagagcacatggtgtactttgcg
gtcatcatgcaggattacgagcgtgtagtagctcaccactgccagcacgacgagtacgat
gaggctctaaatgtgttgtccaggcacagagacgagaaactgttctacaagttctctcca
gttctcatccagcatattcccaagaaggtagttgatgcctggatttctatgggctctaga
ctggatgccaggaatctcattccagcccttgttaactatagccagagtgccagcacccag
cagatcaatgaagccattagatacatggagttctgtgtctatcagttggaggaaacccag
caagccattcacaactacctgttgtctctttatgctttatgtcggccagactcactgctg
tcgtacctggagcaagcaggaaccaatccaaacaggatccactatgacctgaagtatgca
ctgcgcctgtgtgcagagcatgggcaccaccatgcatgtgtccatatttacaaagtgatg
gaattatatgaggaggctgtggatcttgctttacaggtggatgttgatcttgccaagtcc
tgtgcagatcttcctgaagatgatgaggaactccggaagaagctgtggttgaagatcgct
cggcatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctgtccagttgt
gccctgctgaagattgaagatgtgctgccattttttccagactttgtcactattgaccac
tttaaggaggcaatctgtaactcactggaggactacaacaaacacattgaggagctgaaa
agggagatggaggaagccacacagagtgccaagaggatccgagaggacatccaagaaatg
agaaataagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgccctttttacctttttctgtgcggtcacatgtttcactatgattgtctcctc
caagcagttttcccaaaccttcctgcctataagcaggcaaaacttgaagatcttcagaag
aagctggcagctaccagtcagccgtccaagagccaccatcgtcccaaggatgcagatacc
attagcttggggaaggggcagcagagtcgggaacagatcaaagctgacattgatgatatc
gtggcagcagaatgtgtgtactgtggtgagctgatgatccgatccattgacaaacctttt
attgatccccagaagtatgaagaggagatgcaaagctggctgtag
DBGET
integrated database retrieval system
