Empidonax traillii (willow flycatcher): 114059340
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Entry
114059340 CDS
T05887
Symbol
RNF8
Name
(RefSeq) E3 ubiquitin-protein ligase RNF8 isoform X1
KO
K10667
E3 ubiquitin-protein ligase RNF8 [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114059340 (RNF8)
03400 DNA repair and recombination proteins [BR:
etl03400
]
114059340 (RNF8)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114059340 (RNF8)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114059340 (RNF8)
DNA repair and recombination proteins [BR:
etl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
114059340 (RNF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FHA
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
DUF6939
zf-RING_5
zf-rbx1
Yop-YscD_cpl
Prok-RING_4
zf-ANAPC11
zf-RING_6
RING_XB3-XBAT31
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
114059340
NCBI-ProteinID:
XP_027743448
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MAVRGAPRLAWCLRRVGASCDWLLLEAGTQVTIGRGLDITYQLVSKTCPLMISRKHCVFQ
QNAEGQWTVKDNKSLNGVWLNKQRLDPSKVYPIAEGDRIQLGVPLENRETAEYEYEVIKE
EWEKIRPFLAQRSDLGKAKSSRTKRKFSLEESETSGSEGPSNSRCKRDRVSCDSEPLDKS
WERVEEAKRLTEKMDVKLPAPGPSEGDSALVHTSPVHSKKAVPVPHKDQKGSGLTESWTG
LKMLRKTLVDVMKLKVKVQEKQTAVLNVKQKRRKCAQKEILVMEQELQELQDQLCMEQEH
QQQQVEELERTFCKEQQKLEGEKWHHGEENLKEQLAQVLQEHHALMEELSRSKKDFEEII
RAKNKELEETKEEKEKVRAQKEEVLNQMNDVLENELQCTICSEHFIEAVTLNCAHSFCSY
CIDEWTKRKVECPICRQEIKSKTRSLVLDNCIDRMVEKLDVEMKEHRLTLIRRRKEKQNV
MVKPVTDNDNSVTSSTYSILPISSCDSEDSEEDSYYNESYYII
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcgcggggcgccgcgcctggcctggtgcctccgccgagtcggggccagctgc
gactggctgctgctggaggccggcacgcaggtaactataggtcgaggattagatatcacg
taccagctggtgtccaaaacgtgtcccttgatgatctctcgtaagcactgtgttttccag
cagaatgcagaaggccagtggactgtcaaggataacaagagtctaaatggagtctggctt
aacaaacagcgcctggatccatcaaaagtctatcctattgctgaaggagaccgtatccag
ttgggagtgcctttggaaaacagagagactgctgaatatgagtatgaagtaattaaagag
gaatgggagaaaattaggccctttttagcccaaagaagtgacctggggaaagctaagagt
tcaagaactaaacgtaaatttagtttggaggaatcggagacatctggatcagaaggccct
tcaaactccagatgcaaaagagacagagtgtcctgtgacagtgaacctttggataaatca
tgggaacgggtagaagaggccaaacgcttaacagagaagatggatgtcaagctgcctgct
cctggaccaagtgagggggatagcgctctggtgcataccagccctgttcactccaagaaa
gctgtgcctgtcccccataaggaccagaagggctctggtcttacagagtcatggactggc
ttgaaaatgctgaggaaaactctagtagatgtaatgaaattaaaggtcaaagtgcaggag
aagcagacagcagttctgaatgtgaagcagaagcgtaggaagtgtgctcagaaggagatc
ctggtaatggagcaggagctgcaggagttgcaggaccagctgtgcatggaacaagagcat
cagcagcaacaggtggaagagctggagaggacgttttgtaaagagcagcagaagctagag
ggagaaaagtggcatcatggggaggagaatttgaaggagcagctggcccaggtcctacaa
gagcatcatgctttgatggaagagttgagccgtagtaaaaaagattttgaggagataatt
cgagccaagaataaagaactggaagaaacaaaggaggagaaggaaaaggtgagagctcag
aaagaagaggtgctgaatcagatgaatgatgtgttggagaatgagttgcaatgcacaatc
tgttctgagcactttattgaggcggtcactctgaactgtgctcacagcttctgctcctac
tgcatcgatgagtggacgaaacgtaaagtggagtgccccatctgcaggcaggagatcaaa
tcaaagacacgctctcttgtgctggataactgcattgacaggatggtagaaaaactggat
gtggaaatgaaagagcatcgcctgacccttatcagaaggcggaaagagaaacagaatgtg
atggtgaaaccagtcacagacaatgacaacagtgtcacttcttccacctactccatcttg
cccataagcagttgtgacagtgaggactctgaggaggattcttactataatgaaagctat
tacattatctga
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integrated database retrieval system
