Empidonax traillii (willow flycatcher): 114059372
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Entry
114059372 CDS
T05887
Symbol
RNF180
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114059372 (RNF180)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114059372 (RNF180)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114059372 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF180_C
Motif
Other DBs
NCBI-GeneID:
114059372
NCBI-ProteinID:
XP_027743519
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MLSPVLVTVSPQEAKTPRKCKLSLGLAGSFPFAAPLARTCRRSLTPGLTPPQLHPCQSGG
NRTYSLQGSARRGHCPPSRSSRAGPRPAESRAPERRGTRQLLGRTEPPRVTPAAGQGPRC
RSAFHRHLSPISSRSQEHLLLRNPFPARSSATSPCALPDELSGAGGGRRRRCPWGRAGPW
LGGRGHGVSAEVRERLSAPPAPGRAQRPPEGALSAEAAALLPSEPLAPQPLGLAGSGMFG
HRRARPRAAGPAAVPPGDLRPGARVALGQGRHVPAYFVLYFVQVTSQPSAAAQESCNVWY
VNLEAILEWVXCVIEKAKWTIGKLHCPFCEACLGGFNFVCNKRYSHGQLVNIHFCKTQAD
SQPSFSDKLSKSSGKHVPVLKMQSSFSKHTCHEVVTATLEIKNQGLSYVARNNNRSGRLT
EALCLEVKSPRREMKSKKLPLKALNQNRNLSSSYSMNNACTVKPLHIRSHSLDLHIRERL
VFSPVLYETCSMGTITXGQNKNPHAYAXDGLQXEIXGSSFQDLHSSSADKLQNQFXITSF
TTLLYRGTESEFGAHGQSSASVVADRSPFVMKLSSPTRAVXHKDCITAVGLVQPTSISFN
QKLRKXKRSKLKSLRRKQRRRERXVRKQSGNGNLHKDDEQEFRRDKDSYLCAVFISILTC
HHTFCEPGXRILAKDNPTSTSCPLRHTTVARVFFQTAKKRKIYLKLKENFQKSNSAKWPL
PSCKKAFRVFEADFQRCSDTVTRRHFPHAAHRMDYMDFEDDSCGWRFDMDMVIIYIYSVN
WIIGFIVFCFLCYFFFPF
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgttatctccagttctagtcactgtatccccgcaagaggccaaaacaccacggaagtgc
aaactgtccctgggactcgccggctcgtttcccttcgccgcaccgctggctcgcacctgc
cgtcgcagcctgacgccggggctgaccccaccccagctccatccctgccagtcaggaggc
aacaggacgtattccctccagggctcggcacggcgcgggcactgccctccttcccgcagc
agcagggctggccctcgcccggcagagtcccgggctcccgagaggcgagggacgcggcag
ctgctggggaggaccgagcccccccgggtgactcccgcggccgggcaggggccgcgctgt
cggagcgctttccaccgccatttgtctcccatctcttcccgttcgcaagagcacctgctg
ctgcgcaaccccttccccgcccgctccagcgccacctccccctgtgcgctgcccgatgag
ctgagtggggccgggggcgggaggcgccgccgctgcccgtggggccgagccgggccctgg
ctgggcgggcgggggcacggggtaagcgcggaggtgcgggaacgcctgtccgcaccgccc
gcaccgggcagagcccagcgcccgcccgagggggcgctcagcgcggaggcggcagcgctg
ctcccctcggagcccttagcgccgcagcccctgggcctggcgggctcagggatgttcggg
caccggcgggcgcggccgcgggcagcagggcctgcggcggtgccccctggtgacttgagg
ccaggagctcgcgttgcgctgggacaagggcgccacgttcctgcatatttcgtcctttat
tttgtacaagtgacatcacaaccttcagctgctgctcaggagtcttgcaacgtatggtat
gtgaacttagaagccattctagagtgggtgnaatgtgtcattgaaaaggcaaagtggaca
attgggaaactgcactgtccattctgtgaggcttgcttagggggctttaactttgtttgc
aacaaaagatattcccatggacagttagtaaatatacatttctgcaaaactcaagctgac
tctcaaccatctttctctgataaattgtcaaaatcatcaggaaaacacgtgcctgtcctc
aaaatgcagtctagttttagcaagcatacctgccatgaagtggtaactgcaactttagaa
atcaaaaatcaagggctttcctatgtggccagaaataataaccgttctggaagattaaca
gaagcactttgtctagaagtaaaatctccaagacgtgagatgaaaagtaaaaaacttccc
ttaaaggcattaaaccaaaacagaaatctctcttcttcctattctatgaataatgcatgt
actgtaaaacctcttcacataagatcacatagtttggatttgcatattagagagagactg
gttttttcaccagtgttatatgaaacttgcagtatgggaacaatcaccntcggccaaaat
aaaaacccacatgcttatgcataggatggcttgcagtaagaaatanntggtagttctttt
caggacctgcatagttccagtgctgacaaactacaaaaccaattttgaattacatcattt
accacattactatacagaggaacagaaagtgagtttggagctcatgggcaatcttctgcg
agtgtcgttgctgataggtcaccatttgtgatgaaactttcttcacctacaagggctgta
taacacaaagattgcatcacagctgttggtcttgtacagcctacaagtatttccttcaat
caaaagctgagaaagngaaaaagaagcaagttgaaaagcttgaggagaaagcaaaggcgg
cgagaacgataggtacggaagcaatctggaaatggtaacctgcataaagatgatgagcag
gaattcagaagagataaagacagctatctctgtgcagtatttatttcaatccttacatgt
caccacaccttttgtgaacctggctgaaggatccttgccaaagacaatccaaccagcact
tcatgtccactgcgtcacactacagttgccagagtatttttccaaacagctaaaaaaagg
aaaatctatttgaagctaaaggaaaattttcaaaaatcaaattctgcaaaatggcctcta
ccaagctgtaagaaggccttcagagtttttgaagcagattttcaaagatgctcagatact
gtaacgaggaggcatttcccacatgctgcgcacaggatggactatatggacttcgaggat
gatagctgtggatggaggtttgatatggacatggtgataatctacatttattcagtcaac
tggataataggatttattgttttctgttttctttgttatttttttttccctttctag
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