Empidonax traillii (willow flycatcher): 114059439
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Entry
114059439 CDS
T05887
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03022
Basal transcription factors
etl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114059439 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
114059439 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etl03021
]
114059439 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
etl03400
]
114059439 (GTF2H1)
Transcription machinery [BR:
etl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114059439 (GTF2H1)
DNA repair and recombination proteins [BR:
etl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114059439 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
114059439
NCBI-ProteinID:
XP_027743690
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKAMVSQGVKNPLIDLTALEDKSLDEGYGVASVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPLKKVKLQEAIEY
EDLSKNNDVKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFNSIRQEMEAYVPKLTQ
VLSSGDAASTIAVLSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAAGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVGHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcatctgaagaagtgttactgattgtaaagaaggtacgtcagaagaagcag
gatggagctctgtacctcatggccgaacggatagcatgggcacctgaaggcaaagaccgc
ttcacagtcagccatatgtatgcagacataaaatgccagaaaatcagtccagaaggtaaa
gctaaaattcagcttcagctggtattgcatgcaggggacacgaccaacttccacttctcc
aatgaaagcacagcagtgaaggagcgagatgcagtaaaggatcttcttcagcaactgttg
cctaagttcaaaaggaaagctaataaagaacttgaggagaagaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcctgaatgcaggggataattctgcagcacctagtaag
caggatgtgggcatctctgcagcattcctggctgatgtacggcctcagacagatggctgc
aatggtctgaggtacaacttgacttcagatattattgagtccatatttcgaacataccct
gcagtaaaaatgaaatatgcagaaaatgttccacacaacatgaccgagagggaattctgg
acccgattttttcagtctcattattttcatcgggacaggctcaatacaggctcaaaagat
ctctttgcagaatgtgccaaactggatgagaaagggttaaaagcaatggtgtctcaagga
gtgaaaaaccccctgatagatttaacagctttggaagataaatccttagatgaaggctat
ggtgttgcttctgtggcctctacatcaaatgcctcaaagtctgctagagaaagtagcaat
gctgccatcataaaacgctttaatcatcatagtgccatggtccttgcagctggcctcagg
aaacaagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagg
gattcagatttctttcaaccaccactgaaaaaggtgaaactgcaggaggccattgaatac
gaagatttatcaaagaataatgacgttaaaactattgcactaaacttaaagaagtctgat
aggtattatcatggtccaactccaattcaatcacagcaatatgcaaccagtcaggatata
attaattcttttaatagtattagacaagaaatggaagcatatgtacctaaactaactcag
gttctttcaagtggtgatgctgccagcactattgcagtcctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgacattcagtctgaa
ctaaaacatttgtacgtggcagcgggggaactgctacgacacttctggtcctgcttccct
gttaacacgccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagattt
caggttacgaagctctgcccattccaagaaaagattcggagacagtatttaagcacaaat
ttggtaggccatatagaggagatgctgcagacggcctacaacaagttccacacgtggcag
tcacggcgcatgctgaagaagacgtga
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