Empidonax traillii (willow flycatcher): 114059456
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Entry
114059456 CDS
T05887
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114059456 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114059456 (NHLRC1)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114059456 (NHLRC1)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114059456 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Prok-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
114059456
NCBI-ProteinID:
XP_027743721
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MPPAKRAILGCRGGQPGPLSAAPPGLARRGRSAASAALSARPARPGGTRGRSGGAVRPPR
AGMAAEDEAELSLLECRVCFEPYGPDGQRRPRNLPCGHVLCGGCVGALGRRRLECPFCRR
PCGPAETSDCRPLLQLLELLGPAGRLARALGGSGGRGAAAPAPAGLGLRLCLGGWGSLVN
PTGVAACRGTGRLAVAHDGKKRIHVFGPGGSCLQRFGERGDAGNDVKYPLDVTVTPDGHV
VVTDGGDRSVKAFDLEGRGVLAVREGFRLPWGLDATPKSEVILADSEAGALYRLTADFGR
GELKKCQMIRAQLVSPRAVAVCQTSGAVAVIEHLKAQGLNKGKGSTRVKIFSAEMDLIGQ
VDSFGLNLVFSSQIYATAVAFDKEGRVIVTDVCSQAVICLGKPEEFPMFNPLISQGLSYP
VGLTYVASDSLVVLDSGDHSIKIFSTT
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgccacctgccaaacgagccattttgggatgtcggggcgggcagcccgggcccctcagc
gccgccccgcccgggctggcccgcagggggcgctcggccgcctcggccgcgctcagcgcc
cgccccgcccggcccgggggaacccgaggccgctccgggggagccgtccgacctcctcgg
gccgggatggcggcggaggacgaggcggagctgagcctgctggagtgccgcgtgtgcttc
gagccgtacggccccgacgggcagcggcggccgcgcaacctgccctgcgggcacgtcctg
tgcgggggctgcgtgggggccctgggccggcggcgcctcgagtgccccttctgccggcgg
ccctgcggccccgccgagaccagcgactgccgcccgctgctgcagctgctggagctcctg
ggccccgccggccgcctcgcccgggccctgggcgggagcggcggccgaggggcggccgcg
ccggcccccgcggggctcgggctgcggctgtgcctgggcggctgggggtcgctggtgaac
cccaccggggtggcggcctgccgcggcacggggcgcctggccgtggcgcacgacggcaag
aagaggatccacgtcttcgggcccggcgggtcgtgcctgcagcggttcggggagcggggg
gacgcgggcaacgacgtgaagtacccgctcgacgtgacggtcacgccggacgggcacgtg
gtggtcaccgacggcggggaccgctccgtgaaggccttcgatttggagggaaggggggtc
ctggcggtccgggaaggcttccgtttgccctggggcttggatgccacccccaagagtgaa
gtcatcctggccgactcggaggcaggcgctctgtaccgcctgacggccgacttcggaagg
ggggaattgaagaagtgtcagatgatccgggctcagctcgtcagccccagagcggtcgcg
gtctgccagacctcgggggctgtcgcggtaatagagcacctgaaggctcaaggactgaac
aagggcaagggcagcacccgagtgaagatattcagtgcggagatggatctcatcgggcag
gtggatagcttcggtctgaacctcgtattcagctcccaaatatatgctacggctgtggcc
tttgacaaagaaggtcgtgttatagtaacggatgtgtgtagccaggccgtgatatgttta
gggaaacctgaggagtttcccatgtttaaccctctaattagccaagggctttcttaccct
gtcggactgacttacgtggcaagtgattccctcgtcgttttagacagtggcgatcattca
ataaaaatatttagcactacctga
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