Empidonax traillii (willow flycatcher): 114059460
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Entry
114059460 CDS
T05887
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etl03036
]
114059460 (KDM1B)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
114059460 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
SWIRM
DAO
Pyr_redox
Pyr_redox_2
HI0933_like
FAD_binding_3
Pyr_redox_3
FAD_binding_2
FAD_oxidored
Lycopene_cycl
2-Hacid_dh_C
GIDA
NAD_binding_9
AlaDh_PNT_C
NAD_binding_7
KARI_N
ThiF
Shikimate_DH
zf-RING_2
YjeF_N
Motif
Other DBs
NCBI-GeneID:
114059460
NCBI-ProteinID:
XP_027743729
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MSTGRVRTKKKACSSDQSPDSLPVRSSGRQVKKKAAEAAADDDDEASEKKYRKCEKAGCT
ATCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTS
NGKSEPSPKAFMADQQLPYWVQCTKPDCGKWRQLTKEIQLTPQIAKTYRCGMKLNNSTKT
EGSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMSPSCTSTNR
LPGESNLVKLEHLKSVPNLTVAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYS
RDPTMYLALRNLILALWYTNCKEALTPQKCIHHIIVRGLVRIRCVQEMERILYFMTRKGL
INTGLLSVSSDQYLLPKEYHNKSVIIVGAGAAGLAAARQLHNFGIKVIVLEAKDRIGGRV
WDDKTFTGVTVGRGAQIVNGCVNNPVALMCEQLGIKMHKLGEKCDLIQEGGRITDPTIDK
RMDFHFNAILDVVSEWRKDKTQHQDVPLGEKIQEIYKAFIQESGIQFSELEEKVLQFHLS
NLEYACGSNLSQVSARSWDHNEFFAQFAGDHTLLTVGYSTLIEKLAEGLDIRLNFPVQSI
DYSGEEVHVTTADRTVWTTQKVLVTVPLALLQKNAIQFNPPLSEKKIKAINSLGAGVIEK
IALQFPYRFWDSKIQGADFFGHVPPNSSQRGLFSVFYDMDPEGKESILMSVVTGDAVATI
KNLDDQQVLQQCMTVLRELFKEQEVPDPVKFFVTRWSNDPWLQMAYSFVKTGGSGEAYDI
IAEDIQGKIFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggaagggtacgaacgaaaaaaaaggcatgttcttcagatcaatctccagac
agccttcctgtgaggagttctggaagacaggtgaagaagaaagcggctgaagcagcagca
gacgatgatgatgaagcgtcagagaagaaatatagaaagtgtgaaaaagctggatgcact
gcaacatgtcctgtttgctttgccagtgcagctgaaagatgtgctaaaaatgggtataca
tctagatggtatcatctttcctgtggggaacacttctgcaatgaatgttttgaccactat
taccgaagccataaagatggttatgagaaatacactgcctggaaaaggatttggacaagt
aatggtaaaagtgagcccagcccaaaagcctttatggctgatcaacagcttccttactgg
gtgcagtgcacaaagccagactgtggtaaatggcgtcagctgacaaaggaaatccagctg
acaccacaaattgcaaaaacatacagatgtggtatgaaactgaacaattccaccaagact
gagggctcagaccagtgttccatgcctgaggacttgagagtggctgaagtttcagaccat
tggtggtactccatgctcatactccctcctttgctgaaagacagtgtggcagctcccttt
ctagctgcatattatccagactgcgtgggcatgagtccatcctgtaccagcactaatcgg
ttacctggggaatccaaccttgtgaagttagagcacttaaagagcgtgcctaatttgact
gttgcaggcatgaacaagtatttccagcctttttaccaacccaacgaatgcgggaaagca
ctttgtgtgaggccggatgtcatggaactggatgagctctatgagttcccagaatattca
cgagaccctaccatgtacctggcactgagaaacttgattttggctctgtggtacacaaac
tgcaaggaggctctcacccctcaaaaatgtatccatcacatcattgttcgggggctcgtg
cgtattcgctgtgtgcaggaaatggagaggatactttattttatgacaaggaaagggcta
atcaatacagggcttctgtcagtcagttctgaccagtaccttcttcctaaggaataccac
aataaatctgtcattattgttggggctggtgcagcaggattagcagcagcccgacaactg
cacaactttggaattaaggtcattgtcttagaagctaaagacagaatcggtggccgagtg
tgggatgataagacgttcacgggagtcactgttggaagaggtgcacaaatcgtcaatgga
tgtgtcaacaacccagtggcactaatgtgtgagcaacttggcattaaaatgcacaaacta
ggggagaaatgtgacttgatccaggaaggcggaaggataacagatcccactattgataaa
cgcatggactttcatttcaatgccatcctagatgtcgtctctgagtggagaaaagataaa
acccaacatcaagacgttcctcttggtgaaaaaatacaagagatctataaagcctttatc
caggagtctggtatccagttcagtgagctggaagaaaaagtactacagttccatctcagt
aatttggagtatgcctgtggcagcaatctatctcaggtatctgcacgctcatgggaccac
aatgaatttttcgcccagtttgctggagatcacactcttctaactgtgggatattcaact
ctgattgagaagctggcagaagggctggacatccggctgaatttcccagtacagagtatt
gactattctggtgaagaagtgcatgtcactactgcagacagaacagtgtggacaacacaa
aaggtattagtgactgtaccgctggcccttcttcagaaaaatgccattcagtttaatcct
ccactgtcagaaaaaaagattaaagccattaatagtttgggagcaggagtcattgagaag
attgccttgcagtttccttacagattttgggacagtaaaattcaaggagctgattttttt
ggtcacgttccacccaactctagccaacgtgggctctttagtgttttctatgatatggat
ccagagggcaaagaaagcattttaatgtcagtggtcactggagatgctgtggcaaccatt
aagaatttagatgatcaacaagtactgcaacagtgtatgactgtactcagagagctgttt
aaggagcaggaggttcctgacccagtgaagttttttgttacccgctggagcaacgaccct
tggctccagatggcatacagctttgtgaaaacagggggcagcggggaagcttatgacatt
atagctgaagacatacaaggaaaaatcttttttgctggtgaggccacaaataggcacttt
cctcagacggttacaggagcttacttgagtggggttcgagaagccagcaaaatagcagca
ttttaa
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