Empidonax traillii (willow flycatcher): 114059518
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Entry
114059518 CDS
T05887
Symbol
NCAPD3
Name
(RefSeq) condensin-2 complex subunit D3
KO
K11491
condensin-2 complex subunit D3
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etl03036
]
114059518 (NCAPD3)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
114059518 (NCAPD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cnd1
HEAT_2
Adaptin_N
Cohesin_HEAT
Cnd3
Motif
Other DBs
NCBI-GeneID:
114059518
NCBI-ProteinID:
XP_027743858
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MPGGDPRTAAPTAHPPPRPGRGRGRGRGPPRSFRGSAATAIGCGRGRDRGWSVRILPGKG
GMAAEPLRAALGPWQLRDLAAGTLPVPVPRSVPVPVSVSVRISLSQSRTICWAQSLSRSL
GLPVSVQVSRSLCLGSGLGLCPVWVNTVWDLDFTDTEPLDSCIAEKITDDGLDNFTSLYS
ALSPFAAEDSENRENIWTVLAESSLSHQALVAVLHHFVHAGQDKRADAQQRVYGLHAAGL
YFLLLEIPGSIGNQLFHEVMFDKCLHTLTKCWPQELRGRKKTHSQSSQSNPGQNRKKGKR
RRNNNSSMEERLEEEEEEEEEEENDEHVYFSTQDLLQIRNAVFLLLKNFLKLLPKFSLKE
KPHCFQSCLKVFVEMANFEPEVHEFQFSSAMDVNEAKNIPELAYYGLYSLCSPLHSTEDK
ALHYVFYQMLYVILMVKSSFGSKYEVLPITSAVTSARNRAVKFISSLVDELKEAVFRLLR
TLLQHICVKVPDKADYRTYAAQALVTLLNKLPRVEFAEFIAWLYKFSLLSKTSYRVFALD
VALALLDVPERSLDDSLPLDHQRFLKHKFLVQVMVFGPCSDKAPAVRSKALSSLAHCLEM
KSAATLESIRDLVQSSSVHTVLEANTNTANGRVSAEAVSNHPQKALPAFRSTELTDSGNT
AVLEEKEVMAMLRERAGDEKTNVRKSALQVLTGILKHEVTPCSAEDLLPLQERCRDPAVS
VRKQSLQSITELLLSQHSNVLVQKAWLNGVVPVVMDAESSVQEKALEYLDQLLLQHIKPY
QKFRSDDVKQGLAWDLLTLLSSECQELNGYLSRAFSTWSQQNKFTPTFIRNLLSHVETER
AVAAWMLLAEVTSSSPRMDYSEVIESWDSVGRQQNTSAVITRHVLCAIGHVAKHLPKNTC
ERLIDNIKCWLKEFQWPLEVMSPAVETLQKLCRGFACVSEKAQELLNQVFGDLVSTCESY
ISNIVLKEDGAKQLQEDLLVRHLLLLGHAAQQCPARVGEHTFLLVQSILASVDKDQLAKS
LDSEESAGFQPLSQFRGSTMPSVVRAHAFIALGKLCLQHEELAKNSIAPLARELEVSQDV
AVRNNVIIVLCDLCIRYTSMVDRYIPNVSLCLKDPSPLIRKQTLILLTNLLQEEYVKWKD
GLFFRFVSVLVDPVPDIARFTEFCLAHLLLKRNPVMFSQHFIECIFHFNSYEKHGKYNRF
PQSARAKHLFSLKGKDNREKRMQIYTFLLEHFTDEQRFRITTKISDSILACFVDGVLPLD
VEADELLSDTFTVLSCKEIKLSTLRSKPEEDLETDEDEMTVASTVVQVAQKKLISQVQKK
NLIENIIPVITALKSLMEEKRMAALKDLMNYLRETMQDYRTEIKDIFAADKRLAAELEYD
MRKYEEQLAREEESGHQQVLAAQAEVVGAVKSASPSLEGAAPLGGQNNTAQPPGSVPSSV
PSELAAARAGALKEQFLGRRARSLNTLAILNSAKKAVEEQLRKCARRSLSAASSTASSKH
VSFQNLNGQSSGDKVALAGRAISTPEQTIDDVSFGAGVSRISLTHTPRLAPGKSSLGSPS
GEERGEPNPNDQTCGFFFFLNTKMCVSFAEDDDEDKPTDIICLPSPEEPPAPPRQWNVES
PARRRSSQQAPPRRSHRKASQKPKQ
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgccggggggggacccgcgcaccgcagctcccaccgcgcacccaccgccacgcccgggc
cggggccggggccggggccggggcccgccccgctccttccggggcagcgccgccaccgcc
attggctgcggccgcgggcgggaccgcggttggagcgttcgtatcctgcccgggaaaggc
gggatggcggccgagccgctgcgggcggcgctcgggccgtggcagctgcgggacctggcg
gcggggactctcccggtcccggtcccgcgctctgtcccggtgccagtctcggtctctgtt
cgcatctctctctctcagtcccggacgatctgctgggctcagtctctgtcccgatctctc
ggtcttcctgtttcggttcaagtctctcgctctctctgtcttggttctggtctcggtctc
tgtcccgtgtgggtgaacacggtgtgggatctggatttcacggacaccgagcctctggat
tcctgtatagcagaaaagattacggacgacgggctcgacaactttaccagcctgtacagt
gctctgtcaccgtttgctgctgaggactcggagaacagagagaatatctggaccgtgctt
gccgagagcagcctgtcccaccaggctctggtggccgtgctccaccactttgtgcacgcg
gggcaggacaagagagcagatgcacagcagagggtttatggtctgcacgcagctgggctg
tacttcctgctgctggagatcccaggcagtatcggtaaccagctgttccatgaggtgatg
tttgataagtgccttcacaccctgacaaagtgttggcctcaagaactgaggggaagaaaa
aagacgcattctcaaagctctcagagcaatccaggacagaatagaaagaaaggaaaacgg
cgcaggaacaacaactccagtatggaagagagattggaagaggaggaagaggaggaggag
gaggaagaaaacgatgaacatgtttacttttcaacacaagatcttcttcaaatccgcaat
gcagtcttccttcttttgaaaaacttcttgaagcttctacccaagttctccctaaaagag
aagcctcattgttttcagagctgcctgaaggtctttgtggaaatggcaaactttgagcca
gaggtgcacgagttccagttttcatcagcaatggatgttaatgaagccaagaacattcct
gagctggcctactatggactgtactcactgtgttcccctctccacagtacagaagataag
gctcttcactatgtcttctatcaaatgctctatgtcattctgatggtgaaaagttctttc
ggttccaaatacgaagtccttcccatcacatcagcggtgaccagtgccaggaatcgggct
gtaaaattcatcagttccctggtagatgagctgaaagaagctgtatttcgtcttcttcga
acgttactgcaacatatctgtgtcaaggtcccagacaaggctgattatcgcacgtacgct
gcacaggccctggtgactctgctgaacaaactgcctcgtgtggagttcgctgaattcatc
gcttggctgtataaattctcactccttagcaaaacttcctacagagtgtttgctcttgac
gtggccttagctttgctggatgtgccagagaggagcctggatgactccttgcccctggat
caccagaggtttctgaagcacaagttcttagtgcaggtcatggtgttcggcccgtgctcg
gacaaagcccccgcggtccggagcaaagctctgagcagccttgcccactgcctggagatg
aagtctgctgctaccctggagagcatccgggacttagtgcagagctcctctgtccataca
gtgctggaggcaaacacaaacactgccaatgggagagtcagtgctgaagctgtgtccaac
catccacagaaggccttacctgctttcagaagtactgagctgacagatagcggcaatacc
gctgtgcttgaggaaaaagaagttatggccatgctgagagagagagctggagatgagaaa
accaacgtgaggaaatctgctctccaggtcctcacgggcatcctgaagcacgaggtgacc
ccttgctctgcagaggatttgctgcccctccaggagcggtgccgggaccccgccgtgtcc
gtgaggaaacagtccctgcaatccatcactgagctcctcctgtctcagcacagcaatgtt
ctagtgcagaaggcctggttaaatggagtggtgcctgttgtgatggatgcagaaagctct
gtccaagaaaaggccttggagtaccttgatcagctcttgttgcaacatataaaaccttac
cagaagttcaggagtgatgatgtgaagcaggggctggcgtgggatctgctcaccctcttg
tcttcagaatgccaggagctgaatggttacttgagcagagctttcagcacctggtcccag
cagaacaagttcacccccactttcatccgtaacctcctgtcccacgtggaaacggaacgt
gctgtggcagcttggatgctgcttgctgaggtgacaagttcttcacccaggatggattat
tcggaggtcattgagtcctgggacagtgtgggcaggcagcagaacacgagcgctgttatc
accagacacgtcctgtgtgccatcgggcacgtggcaaagcacctcccaaaaaacacctgc
gagaggctgattgacaatatcaagtgctggctgaaggagtttcagtggcccttggaggtg
atgagccctgctgtggagaccctgcagaagctctgccgtgggtttgcatgtgtgtcagag
aaggctcaggagctgctcaaccaggtgtttggagatttagtatccacctgtgagagctat
atttcgaatatagtcctcaaagaggatggagcaaagcagctgcaagaagatctcttggtg
agacacctcctcctcctggggcacgctgcccagcagtgcccagccagagtgggcgaacac
accttccttctggttcagtccatcctggcttctgtcgacaaggaccaattggctaaatct
ctggatagtgaggagagtgcgggttttcagccgctgtcccagttcagaggctcaaccatg
ccttccgtggtcagggcccatgccttcatcgctctgggtaaactgtgcttacagcatgag
gagctggcaaagaacagcattgcacctctggcccgggagctggaggtgtcccaggacgtg
gctgtcaggaataacgtcatcattgtgctgtgtgacctgtgcatccgttacacatccatg
gtggacagatacattcccaacgtttccctgtgcctgaaggacccaagtcccctcatccgt
aagcagaccctgatcctgctcaccaacctcctgcaggaggagtacgtgaaatggaaggat
ggtctcttcttccgtttcgtcagtgtcctggtggatccagtcccagacatcgccaggttt
acagagttctgcctggcgcatctcttactgaagaggaacccagtcatgttctcccaacac
ttcattgagtgcatcttccacttcaatagctatgagaaacacgggaagtacaacaggttc
ccccagagtgcacgggcgaagcatctcttctctctgaaggggaaagataacagagaaaaa
aggatgcaaatctacaccttcctgctggagcatttcacagacgagcagaggttccgcatt
acaaccaagatcagcgacagcatcctagcttgctttgtggatggggtccttccactggac
gtggaagccgatgagctgctctcagatacgttcacagtcctcagctgcaaagaaatcaag
ctctcaactctgaggtccaaacccgaggaagaccttgagaccgatgaagacgagatgaca
gtggccagtactgttgtacaggtggcacagaaaaagctcatctcgcaggttcagaagaag
aatctcatagaaaacatcatcccagtaatcacagcactgaagtctctgatggaggagaag
aggatggcagctcttaaggacctgatgaactacctacgggaaacgatgcaggattaccga
accgaaatcaaagacatcttcgccgcggacaagcggctggcggccgagctggagtatgac
atgaggaaatatgaagagcagctggccagggaggaggagtcaggccaccagcaggtcctg
gcagcgcaggcagaggttgttggtgctgttaagtctgcatctccatctttggagggagct
gcacctcttggtggccagaataacactgctcagcctcctggatcagtcccttcctccgtg
ccttctgagctggctgcagctcgtgctggtgccctgaaggagcagttcctgggtcgcagg
gcacgatccctgaacacactggccatcctgaactctgccaagaaggctgtggaagagcag
ctcaggaagtgtgccaggaggagtttatcagctgcatcaagcacagcaagcagcaagcat
gtgtcctttcaaaacctgaatggacagtcctctggagacaaggtggccttggcaggtcgt
gccatcagcaccccagagcagaccattgatgacgtgagttttggtgctggggtcagtcgc
atcagcctgacacacacaccccgtttggctccaggcaagtcatctctgggatccccctct
ggggaggagaggggggaaccaaacccaaatgatcaaacctgtggctttttttttttttta
aataccaaaatgtgtgtgtcctttgcagaggatgacgatgaggataagccaactgatatt
atctgtttgccatcgccggaggaacccccagccccacctcggcagtggaacgtggagtcc
ccagccaggagaaggagcagccagcaagcccctccgagacggtcccaccgcaaagcctcc
cagaaaccgaaacaatga
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