Empidonax traillii (willow flycatcher): 114059713
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Entry
114059713 CDS
T05887
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03250
Viral life cycle - HIV-1
etl04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114059713 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
114059713 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etl03400
]
114059713 (SAMHD1)
DNA repair and recombination proteins [BR:
etl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
114059713 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
PDEase_I
HD_assoc_2
HARE-HTH
PPP1R21_helical
Motif
Other DBs
NCBI-GeneID:
114059713
NCBI-ProteinID:
XP_027744273
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MGSPAGAPAKRARSEGTPGPDPRDPRDTDRGDTDPRVTDRGDPRLWDTERLCQHLSRCGV
GNPSLLRRFRESGVTGRMLLELPACAPEVTRVCCPAEHLEVLACLKQLPQQHMDVMKVFN
DPIHGHIEIHPLLVRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSIGVGYLAGCLV
RTLKDRQPELDITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPMARPDLKWKHETASVK
MFEHLIASNKLEEVMKSYGLVLEEDMLFIKEQIGGPIDETACDKSWPYRGRTKEKSFLYE
IVANKKNGIDVDKWDYFARDCHHLGIPNNFDYKRLLLLTRVCEVKNQKHICTRDKEVGNL
YEMFHTRNSLHRRAYQHKTGNIIELMITEAFQKADKYFEIRGSGGKVYRISTAMEDMEAY
TKLTDSIYLEILHSSHPELEEAREILRKIERRELYKFLGETRPETKKEIVKSNGLAEGIA
NSKPEKDPPDVELKAENFIVDVINMDYGMKEQNPIDNVHFYCKADPSKAVNISKEQVSKF
LPITFTEQVIRVYYKSQDPHTISAAKQYFIQWCMQNDFTKPQDGDVVAPHLTPMKRTWNN
VREDEDRRASEPSCKQRLPFHE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggggagcccggcgggcgctcccgccaagcgcgcgcggagcgaggggacccccggcccc
gacccccgggacccccgggacaccgaccgcggggacactgacccccgggtcaccgaccgg
ggggacccccgtctctgggacaccgagcggctctgccagcacctctcccgctgcggcgtg
ggcaaccccagcctgctgcgccgcttccgagagagcggagtcaccgggaggatgctgctg
gagctgccggcctgcgcccccgaggtcacccgcgtctgctgcccagctgagcacctggaa
gtgctggcctgcctgaagcagctgcctcagcagcacatggacgtgatgaaggtttttaac
gatcctattcatgggcacattgaaatacatcccctgcttgtccgtatcatcgacactcct
cagttccagcgcctccggtacatcaagcagctgggtggcacttactttgtgtttccagga
gcctctcacaaccgctttgaacactccattggggttggttacctagcaggatgtctggtt
cgtacgctaaaggacagacaaccagaactggatataacccagcgagacatcctctgtgtg
gaaattgctgggctttgccacgatttgggtcatgggccattttcacacatgtttgatgga
agatttattccaatggctcgtccagatttgaagtggaagcatgaaactgcttctgttaaa
atgtttgagcaccttatagcttccaataaactagaagaagtcatgaagtcatatggtctt
gtcctggaagaagatatgctctttatcaaggaacaaataggaggacctatagatgaaact
gcttgtgacaaatcgtggccctaccgtggtcgaacaaaggagaaaagtttcctctatgag
atagtagctaacaaaaagaacggcattgacgttgacaagtgggattattttgcaagggat
tgccatcacctggggatcccgaataattttgattataagcgacttcttctcttaactcgg
gtctgtgaagtgaaaaaccagaagcacatctgtaccagggacaaggaagttggaaatttg
tatgaaatgttccacacccggaattccctgcaccggagggcataccagcacaagactggc
aacatcattgaactaatgattacagaagcctttcaaaaagcagacaaatattttgaaata
agaggctctggaggaaaagtgtatcggatttctacagcaatggaggacatggaagcctac
actaagctaactgacagtatctacctggaaattctgcactcgagtcatcccgaactggag
gaggcacgagaaattttgcgtaaaatagaacgacgcgagttatacaagtttttaggagag
actcgacctgaaacaaagaaggaaattgtaaagagtaatggcctggcagaaggtattgct
aattctaagccagagaaggatcctccagacgtggagctaaaggctgagaacttcatagtt
gatgttatcaacatggattatggaatgaaagaacagaatcccattgataacgttcacttc
tattgcaaggctgatccttccaaggcagtcaacatcagtaaagaacaggtttcaaagttt
ttacccataacatttacggagcaggttatccgggtttattacaaaagtcaggatccacat
actatttcagctgcaaaacagtactttattcagtggtgtatgcagaatgatttcaccaaa
ccacaggatggtgatgttgttgcccctcatctgactccaatgaagagaacctggaataat
gtgagagaggatgaagacaggagagcctcagaacccagctgcaaacaaaggcttcctttt
catgagtaa
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