KEGG   Empidonax traillii (willow flycatcher): 114060003
Entry
114060003         CDS       T05887                                 
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
  KO
K05702  afadin
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl04517  IgSF CAM signaling
etl04519  Cadherin signaling
etl04520  Adherens junction
etl04530  Tight junction
Brite
KEGG Orthology (KO) [BR:etl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    114060003 (AFDN)
   04519 Cadherin signaling
    114060003 (AFDN)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    114060003 (AFDN)
   04530 Tight junction
    114060003 (AFDN)
SSDB
Motif
Pfam: RA AFDN DIL PDZ FHA PDZ_6 RA_3 PDZ_2 RA_2 RASSF8-10_RA Yop-YscD_cpl
Other DBs
NCBI-GeneID: 114060003
NCBI-ProteinID: XP_027744909
LinkDB
Position
Unknown
AA seq 1925 aa
MSGGGGGSREEERRKLADIINHWNANRLDLFEISDPTEDLEFHGVMRFYFQDKAAGNFAT
KCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLN
WNKDDREGRFVLKNENDTLPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRREKEA
LRQASDKDDRLLHGDDIENFRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQE
FRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEALEKYGLEKENPKDYC
IARVMLPPGAQHSDDKGAKETILDDDECPLQIFREWPSDKGILVFQLKRRPPDYVPKKTR
KITEGKPLKGKERIDGSGYGSCLPPEKLPYLVELSPGRRNHFAYYNYHAYEDGSDSRDKP
KLYRLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQR
ISETTMLQSGMKVQFGSSHVFKFVDPTQDHIISKRPTDASLMVKGPRHKTGAVQETTFDL
EGDVHSGTALPASKSTSRLDGDRTSSASSTAERGMVKPMIRIEQQDYRRQESRSQDTHGP
ELILPASIEFRESSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDITPA
ERTHKVIAIVNKMVNMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSR
ITVDAQDVLAHLVQMAFKYLVHCLQSDLNNYMPAFLDDPEENNPQRPKIDDVLHTLTGAM
SLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTAPDSGLCSHYWGAIVRQQLGHIEAWA
EKQGLELAADCHLSRIVQATTLLTMDKYSHADVPNINSTCFKLNSLQLQALLQNYHCAPD
EPLIPTELIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNVPS
GLQEFLDPLCQRGFCRLTPHPRSPGTWTIYFEGADYESHLSHENAELAQPLRKEPEIITV
TLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLS
QERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFE
LYNNSTQNGSPESPQLPWTEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKNAYA
SGTTTKITSVSTGNLCTEEQTLPPRPEAYPIPTQTYTREYFTFPASKSQDRMGPAQSQWP
NYEEKPQIQAESNHSINSTMQRVARSQEELRDKVFQPERNRLEVVIRKDVEYIDRKSDSD
QWMNSSVDSSTSSQEHLNHSSKPVSPGSCLAKSGPGRWKTPATSQPTPVAISQPIRTDLP
PPPPPPPVHYAAEFDELQMDLPLPPPPPPNQIGAQASSQVAAAERKKREEHQRWYEKEKA
RLEEERERKRREQERKLGQMRSQPLIPAQPVVPPVPLQQVKSEKPSTLQRSQETVIRELQ
PQQQPRTIERRDLQYITISKEELSSSDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQE
LQNKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDDEEEDDDVDTMLIMQRLEAERR
ARQTAVPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERTRREAEEKR
RQEEEYYSRLEAERRRQHDEAERRLLEPDEPGLYRPPLPREYELPSPTPSSNAPPPPPQR
NTSYLKTQVLSPDTIYTAKFVAYNDDDEEEEDSNLAGQDKYSSTRKSYGDFPPATLKQQQ
PSRQPRPVSDGIFLSNSFQSSPVNANSTTAKKPQPPPPSNKPSFIHSSSSKGINSYTGST
GAAAGEVYRDPRDKRSKSQDADLPGAPENLTFRERQRLFSQGQDVSNKVKASRKLMELEN
ELNTK
NT seq 5778 nt   +upstreamnt  +downstreamnt
atgtcgggcggcggtggcggcagccgggaggaggagcggcgcaaactcgccgacatcatc
aaccactggaacgcgaaccggctggacctgttcgagatcagcgaccccaccgaggatctg
gagtttcatggagtaatgagattctactttcaagacaaagcagctggaaattttgcaaca
aaatgtatccgtgtctctagtactgctacaactcaagatgtgatagaaactcttgcggag
aagtttcgaccagacatgcgaatgttgtcatcccctaaatattcgctttacgaagtgcat
gtcagcggcgaagaaagaagattagatgtagatgagaagcctcttgttgtgcaattaaac
tggaacaaagacgatcgagagggaaggtttgtcctcaagaatgaaaatgatacacttcct
ccaaagaaagctcagagtaatggccctgaaaagcaagaaaaagagggagtaattcagaat
ttcaagcgaactctttcaaaaaaggaaaaaaaagagaaaaagaggcgtgaaaaagaggca
ttgcgacaagcatcagataaagatgatagacttcttcacggggatgatattgagaatttt
cgccttgcagctgaggtttacaaagatatgcctgaaaccagcttcactcgcacaatatcc
aatcctgaggtggttatgaaacggcggcgacagcaaaagctagagaagagaatgcaggag
tttcgcagttctgatggcagaccagactcaggtgggacactgagaatttatgcagacagt
ttaaaaccaaatataccgtacaagacaatcctgctgtccactacagatactgcagacttt
gcagttattgaagcactggaaaaatacggtctggaaaaagaaaatcccaaggattattgt
attgctcgtgtcatgttgcctcctggtgctcagcactctgatgataaaggtgctaaagaa
actattcttgatgatgatgagtgtccactgcagatattcagggagtggcctagtgataaa
ggaatactagtctttcagctgaaaaggcggcctcctgattatgtcccaaagaaaaccagg
aaaataactgaaggaaagccattaaaggggaaggaaagaattgacgggtctggctacggc
tcttgtcttcctcctgagaaactaccatacctagtagaattaagcccagggagaaggaat
cactttgcctactacaactatcacgcttatgaagatggttctgactccagagataaacca
aagctctatcgtctacaattaagtgtcactgaagttggaactgaaaaatttgatgacaat
tccattcagttatttggtccaggaattcagcctcatcactgtgacctcactaatatggat
ggagttgttactgtaaccccaagaagcattgatgctgaaacctatgtggaaggtcagcgt
atttcagaaactaccatgctacaaagtggaatgaaggttcagtttgggtcatctcatgta
tttaagtttgtggatcctactcaggaccatattatttccaaaagacctactgatgcaagt
cttatggtcaagggtccaagacacaaaactggagctgtacaggaaaccacatttgatctg
gagggagatgttcacagtggaacagcactaccagcgagcaagagcaccagcaggcttgat
ggcgacaggacatcatcagcatccagcacagctgaacgaggaatggtgaagccgatgatt
aggatagaacagcaagattaccgcagacaggaaagcagatctcaggacacccatggacca
gaactgatactgcctgccagtattgaattcagggaaagctctgaagatgccttcttatct
gccattataaattacacaaatagctcgacagttcattttaagctgtcacctacgtacgtg
ttgtatatgacatgtcggtatgtattgtccagccagtacagacctgacatcactcctgct
gagcgtactcacaaagtcattgcaatagtcaacaagatggtgaacatgatggaaggagtg
atacaggaggtagaccaggttgatcagaaacagaagaatatagctggggcacttgccttt
tggatggcaaatgcgtctgaattactgaatttcataaagcaagacagagatcttagccga
attactgtggatgcacaagatgttttagcacacctggttcaaatggcattcaagtacctg
gttcattgtctgcagtcagaccttaataactacatgccagcattccttgatgatccagag
gaaaataatcctcagaggcctaaaatagatgatgtgctgcatacattgactggagctatg
tccctgttacgacgatgtagagtgaatgctgctctgactatacagctcttctcccagctg
tttcattttatcaacatgtggctttttaacagattagttacagccccagattcagggtta
tgttcacattactggggagctattgttcgtcaacagttgggccacatcgaagcctgggca
gaaaaacaaggtttagaattggctgctgattgtcacctgagcagaatagtgcaggcaacc
acattgcttaccatggacaaatattcacacgcagatgttccaaatattaacagtacttgc
tttaagctgaattctctgcagctacaagctttgttgcagaattatcactgtgctccagat
gaaccactcatcccaacggaattgatagagaatgtagtaacagttgcagaaaatacggct
gatgaacttgctcgcagcgatggccgagaagtccagctggaagaggatcctgacttacag
ctaccttttcttttaccagaagatggttattcctgcgatgttgtcagaaatgttccgagt
ggtttacaagaatttttagatccgctctgtcaaagaggtttttgtagattaacacctcat
ccacggtcaccaggcacatggacaatatactttgaaggtgcagactatgaaagtcacctg
tcacatgagaatgctgagctggctcagcctttgaggaaagaacctgaaattatcactgta
acactaaaaaaacaaaacggaatgggactgagcattgttgctgccaagggtgctggtcaa
gacaaacttggaatatatgtcaagtctgttgtgaagggaggcgctgcagatgtggatggt
cgtctggctgcaggggatcagttgcttagtgtggatggtcgaagtttggtgggcctgtcc
caggaaagggcagcagaacttatgacaaggacaggttctgtagtaacattagaagtagca
aaacaaggagcaatttaccatggtctggcaaccctgcttaatcagccatccccaatgatg
caaagagtttctgaccgccgtggctcaggtaaaccccgaccaaagagtgaaggatttgag
ctgtataacaactccactcaaaatggatcacctgagagtcctcagctgccgtggacagag
tacagcgaaccaaagaagctgccaggggatgacagattgatgaagaacagagctgatcat
cgatccagtcccaatgtagcaaatcagcctccaagccctgggggaaagaatgcttatgca
tctggaactaccaccaaaataacctcagtctcaactggaaatctttgtacagaggaacag
actctgccaccaagacctgaagcttatcccatcccaacacagacctatactagagaatat
ttcacattcccagcttccaagtcccaggatcgaatgggtccagctcagagtcagtggcca
aattatgaagaaaaaccacagatccaggcagagagcaatcattctatcaatagtacgatg
cagcgtgtagctcgttcccaggaagagctcagagataaagttttccagccagagaggaat
cgtttggaagttgttatacggaaggatgtggagtacattgatcggaaatcagacagcgac
cagtggatgaattcatctgtggattccagcacatctagccaggagcatctgaatcattcc
tccaaaccagtctcacctggttcctgtttagctaaaagtggacctggccgttggaaaact
ccagctactagccagccgactccagtggccatttctcagcccatcagaacagatcttccc
cctccaccaccacctcctccggtgcattatgcagccgaatttgatgaactacaaatggat
ttgcctctgcctccccctcctcctccaaaccagataggagcacaagcatcctctcaggta
gctgctgctgagcgtaaaaaaagagaagagcatcagaggtggtatgaaaaggaaaaggca
cgtttggaagaagaacgagaaaggaaacgtcgtgagcaggagagaaaactgggccaaatg
cgttctcagccactaattcctgctcagcctgtggttcctcccgttccccttcagcaagtg
aaatcagaaaaaccttcaactctgcagaggtctcaagaaacagttattcgagagttgcag
ccccagcagcagcctcggactattgagcggagagatctgcagtacattactatcagcaag
gaagaactgtcatctagtgatagcctctctccagatccctggaaacgggatgctaaagag
aaactggagaagcagcaacagatgcacattgtggacatgctgagtaaagagattcaggag
cttcagaacaagcctgatcgtacagcggaagaaaatgaccgcctccgcaaactcatgctt
gagtggcagttccaaaagcgacttcaagaatcgaaacaaaaggatgaagatgatgatgaa
gaggaggatgatgatgtggatactatgctcatcatgcagcgactggaggcagaaagaaga
gcaaggcagactgcagtgccagcaatctctgttctagatttgttacaggatgaagagcgc
agacggcagcagcaattggaagaaatgaggaaacgagaggcagaagacagggccaggcag
gaagaagagcgacgacagcaagaggaggagcggactaggagagaggctgaagaaaagagg
cgacaggaagaggaatattacagtcgcttagaggctgaaaggcgcaggcagcatgatgaa
gctgaacgaagattactggaacctgacgagcctggtctgtacagacctccacttccacgg
gaatatgaactcccatccccaaccccttcatctaacgctcctcctcccccacctcagcga
aacacctcttacctcaaaacacaggtcctctcccctgacacgatttatactgccaagttt
gttgcatacaatgatgatgatgaggaggaggaggattccaatctagcaggtcaggataag
tactccagcacaagaaaatcttatggtgactttcctcctgccacccttaagcaacagcag
ccctcccgccagcctcgcccagtttcagatggcatctttctttccaactcattccagtca
tctccagtcaatgccaacagtactactgccaaaaaaccccagcccccgcccccatcaaac
aaaccgagtttcatccattccagcagctctaaaggaataaattcatacactggatctaca
ggagcagctgctggggaagtttaccgggatccaagagacaaaagatctaaaagtcaagat
gcagatttacctggagcaccagaaaacctgacgttcagggaacgccaacgacttttttca
cagggtcaggatgtatccaataaagtaaaagcttctaggaaactaatggaactggaaaat
gagttgaacacaaaataa

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