Empidonax traillii (willow flycatcher): 114060003
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Entry
114060003 CDS
T05887
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04517
IgSF CAM signaling
etl04519
Cadherin signaling
etl04520
Adherens junction
etl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
114060003 (AFDN)
04519 Cadherin signaling
114060003 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114060003 (AFDN)
04530 Tight junction
114060003 (AFDN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
AFDN
DIL
PDZ
FHA
PDZ_6
RA_3
PDZ_2
RA_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
114060003
NCBI-ProteinID:
XP_027744909
LinkDB
All DBs
Position
Unknown
AA seq
1925 aa
AA seq
DB search
MSGGGGGSREEERRKLADIINHWNANRLDLFEISDPTEDLEFHGVMRFYFQDKAAGNFAT
KCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLN
WNKDDREGRFVLKNENDTLPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRREKEA
LRQASDKDDRLLHGDDIENFRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQE
FRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEALEKYGLEKENPKDYC
IARVMLPPGAQHSDDKGAKETILDDDECPLQIFREWPSDKGILVFQLKRRPPDYVPKKTR
KITEGKPLKGKERIDGSGYGSCLPPEKLPYLVELSPGRRNHFAYYNYHAYEDGSDSRDKP
KLYRLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQR
ISETTMLQSGMKVQFGSSHVFKFVDPTQDHIISKRPTDASLMVKGPRHKTGAVQETTFDL
EGDVHSGTALPASKSTSRLDGDRTSSASSTAERGMVKPMIRIEQQDYRRQESRSQDTHGP
ELILPASIEFRESSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDITPA
ERTHKVIAIVNKMVNMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSR
ITVDAQDVLAHLVQMAFKYLVHCLQSDLNNYMPAFLDDPEENNPQRPKIDDVLHTLTGAM
SLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTAPDSGLCSHYWGAIVRQQLGHIEAWA
EKQGLELAADCHLSRIVQATTLLTMDKYSHADVPNINSTCFKLNSLQLQALLQNYHCAPD
EPLIPTELIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNVPS
GLQEFLDPLCQRGFCRLTPHPRSPGTWTIYFEGADYESHLSHENAELAQPLRKEPEIITV
TLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLS
QERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFE
LYNNSTQNGSPESPQLPWTEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKNAYA
SGTTTKITSVSTGNLCTEEQTLPPRPEAYPIPTQTYTREYFTFPASKSQDRMGPAQSQWP
NYEEKPQIQAESNHSINSTMQRVARSQEELRDKVFQPERNRLEVVIRKDVEYIDRKSDSD
QWMNSSVDSSTSSQEHLNHSSKPVSPGSCLAKSGPGRWKTPATSQPTPVAISQPIRTDLP
PPPPPPPVHYAAEFDELQMDLPLPPPPPPNQIGAQASSQVAAAERKKREEHQRWYEKEKA
RLEEERERKRREQERKLGQMRSQPLIPAQPVVPPVPLQQVKSEKPSTLQRSQETVIRELQ
PQQQPRTIERRDLQYITISKEELSSSDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQE
LQNKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDDEEEDDDVDTMLIMQRLEAERR
ARQTAVPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERTRREAEEKR
RQEEEYYSRLEAERRRQHDEAERRLLEPDEPGLYRPPLPREYELPSPTPSSNAPPPPPQR
NTSYLKTQVLSPDTIYTAKFVAYNDDDEEEEDSNLAGQDKYSSTRKSYGDFPPATLKQQQ
PSRQPRPVSDGIFLSNSFQSSPVNANSTTAKKPQPPPPSNKPSFIHSSSSKGINSYTGST
GAAAGEVYRDPRDKRSKSQDADLPGAPENLTFRERQRLFSQGQDVSNKVKASRKLMELEN
ELNTK
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcggtggcggcagccgggaggaggagcggcgcaaactcgccgacatcatc
aaccactggaacgcgaaccggctggacctgttcgagatcagcgaccccaccgaggatctg
gagtttcatggagtaatgagattctactttcaagacaaagcagctggaaattttgcaaca
aaatgtatccgtgtctctagtactgctacaactcaagatgtgatagaaactcttgcggag
aagtttcgaccagacatgcgaatgttgtcatcccctaaatattcgctttacgaagtgcat
gtcagcggcgaagaaagaagattagatgtagatgagaagcctcttgttgtgcaattaaac
tggaacaaagacgatcgagagggaaggtttgtcctcaagaatgaaaatgatacacttcct
ccaaagaaagctcagagtaatggccctgaaaagcaagaaaaagagggagtaattcagaat
ttcaagcgaactctttcaaaaaaggaaaaaaaagagaaaaagaggcgtgaaaaagaggca
ttgcgacaagcatcagataaagatgatagacttcttcacggggatgatattgagaatttt
cgccttgcagctgaggtttacaaagatatgcctgaaaccagcttcactcgcacaatatcc
aatcctgaggtggttatgaaacggcggcgacagcaaaagctagagaagagaatgcaggag
tttcgcagttctgatggcagaccagactcaggtgggacactgagaatttatgcagacagt
ttaaaaccaaatataccgtacaagacaatcctgctgtccactacagatactgcagacttt
gcagttattgaagcactggaaaaatacggtctggaaaaagaaaatcccaaggattattgt
attgctcgtgtcatgttgcctcctggtgctcagcactctgatgataaaggtgctaaagaa
actattcttgatgatgatgagtgtccactgcagatattcagggagtggcctagtgataaa
ggaatactagtctttcagctgaaaaggcggcctcctgattatgtcccaaagaaaaccagg
aaaataactgaaggaaagccattaaaggggaaggaaagaattgacgggtctggctacggc
tcttgtcttcctcctgagaaactaccatacctagtagaattaagcccagggagaaggaat
cactttgcctactacaactatcacgcttatgaagatggttctgactccagagataaacca
aagctctatcgtctacaattaagtgtcactgaagttggaactgaaaaatttgatgacaat
tccattcagttatttggtccaggaattcagcctcatcactgtgacctcactaatatggat
ggagttgttactgtaaccccaagaagcattgatgctgaaacctatgtggaaggtcagcgt
atttcagaaactaccatgctacaaagtggaatgaaggttcagtttgggtcatctcatgta
tttaagtttgtggatcctactcaggaccatattatttccaaaagacctactgatgcaagt
cttatggtcaagggtccaagacacaaaactggagctgtacaggaaaccacatttgatctg
gagggagatgttcacagtggaacagcactaccagcgagcaagagcaccagcaggcttgat
ggcgacaggacatcatcagcatccagcacagctgaacgaggaatggtgaagccgatgatt
aggatagaacagcaagattaccgcagacaggaaagcagatctcaggacacccatggacca
gaactgatactgcctgccagtattgaattcagggaaagctctgaagatgccttcttatct
gccattataaattacacaaatagctcgacagttcattttaagctgtcacctacgtacgtg
ttgtatatgacatgtcggtatgtattgtccagccagtacagacctgacatcactcctgct
gagcgtactcacaaagtcattgcaatagtcaacaagatggtgaacatgatggaaggagtg
atacaggaggtagaccaggttgatcagaaacagaagaatatagctggggcacttgccttt
tggatggcaaatgcgtctgaattactgaatttcataaagcaagacagagatcttagccga
attactgtggatgcacaagatgttttagcacacctggttcaaatggcattcaagtacctg
gttcattgtctgcagtcagaccttaataactacatgccagcattccttgatgatccagag
gaaaataatcctcagaggcctaaaatagatgatgtgctgcatacattgactggagctatg
tccctgttacgacgatgtagagtgaatgctgctctgactatacagctcttctcccagctg
tttcattttatcaacatgtggctttttaacagattagttacagccccagattcagggtta
tgttcacattactggggagctattgttcgtcaacagttgggccacatcgaagcctgggca
gaaaaacaaggtttagaattggctgctgattgtcacctgagcagaatagtgcaggcaacc
acattgcttaccatggacaaatattcacacgcagatgttccaaatattaacagtacttgc
tttaagctgaattctctgcagctacaagctttgttgcagaattatcactgtgctccagat
gaaccactcatcccaacggaattgatagagaatgtagtaacagttgcagaaaatacggct
gatgaacttgctcgcagcgatggccgagaagtccagctggaagaggatcctgacttacag
ctaccttttcttttaccagaagatggttattcctgcgatgttgtcagaaatgttccgagt
ggtttacaagaatttttagatccgctctgtcaaagaggtttttgtagattaacacctcat
ccacggtcaccaggcacatggacaatatactttgaaggtgcagactatgaaagtcacctg
tcacatgagaatgctgagctggctcagcctttgaggaaagaacctgaaattatcactgta
acactaaaaaaacaaaacggaatgggactgagcattgttgctgccaagggtgctggtcaa
gacaaacttggaatatatgtcaagtctgttgtgaagggaggcgctgcagatgtggatggt
cgtctggctgcaggggatcagttgcttagtgtggatggtcgaagtttggtgggcctgtcc
caggaaagggcagcagaacttatgacaaggacaggttctgtagtaacattagaagtagca
aaacaaggagcaatttaccatggtctggcaaccctgcttaatcagccatccccaatgatg
caaagagtttctgaccgccgtggctcaggtaaaccccgaccaaagagtgaaggatttgag
ctgtataacaactccactcaaaatggatcacctgagagtcctcagctgccgtggacagag
tacagcgaaccaaagaagctgccaggggatgacagattgatgaagaacagagctgatcat
cgatccagtcccaatgtagcaaatcagcctccaagccctgggggaaagaatgcttatgca
tctggaactaccaccaaaataacctcagtctcaactggaaatctttgtacagaggaacag
actctgccaccaagacctgaagcttatcccatcccaacacagacctatactagagaatat
ttcacattcccagcttccaagtcccaggatcgaatgggtccagctcagagtcagtggcca
aattatgaagaaaaaccacagatccaggcagagagcaatcattctatcaatagtacgatg
cagcgtgtagctcgttcccaggaagagctcagagataaagttttccagccagagaggaat
cgtttggaagttgttatacggaaggatgtggagtacattgatcggaaatcagacagcgac
cagtggatgaattcatctgtggattccagcacatctagccaggagcatctgaatcattcc
tccaaaccagtctcacctggttcctgtttagctaaaagtggacctggccgttggaaaact
ccagctactagccagccgactccagtggccatttctcagcccatcagaacagatcttccc
cctccaccaccacctcctccggtgcattatgcagccgaatttgatgaactacaaatggat
ttgcctctgcctccccctcctcctccaaaccagataggagcacaagcatcctctcaggta
gctgctgctgagcgtaaaaaaagagaagagcatcagaggtggtatgaaaaggaaaaggca
cgtttggaagaagaacgagaaaggaaacgtcgtgagcaggagagaaaactgggccaaatg
cgttctcagccactaattcctgctcagcctgtggttcctcccgttccccttcagcaagtg
aaatcagaaaaaccttcaactctgcagaggtctcaagaaacagttattcgagagttgcag
ccccagcagcagcctcggactattgagcggagagatctgcagtacattactatcagcaag
gaagaactgtcatctagtgatagcctctctccagatccctggaaacgggatgctaaagag
aaactggagaagcagcaacagatgcacattgtggacatgctgagtaaagagattcaggag
cttcagaacaagcctgatcgtacagcggaagaaaatgaccgcctccgcaaactcatgctt
gagtggcagttccaaaagcgacttcaagaatcgaaacaaaaggatgaagatgatgatgaa
gaggaggatgatgatgtggatactatgctcatcatgcagcgactggaggcagaaagaaga
gcaaggcagactgcagtgccagcaatctctgttctagatttgttacaggatgaagagcgc
agacggcagcagcaattggaagaaatgaggaaacgagaggcagaagacagggccaggcag
gaagaagagcgacgacagcaagaggaggagcggactaggagagaggctgaagaaaagagg
cgacaggaagaggaatattacagtcgcttagaggctgaaaggcgcaggcagcatgatgaa
gctgaacgaagattactggaacctgacgagcctggtctgtacagacctccacttccacgg
gaatatgaactcccatccccaaccccttcatctaacgctcctcctcccccacctcagcga
aacacctcttacctcaaaacacaggtcctctcccctgacacgatttatactgccaagttt
gttgcatacaatgatgatgatgaggaggaggaggattccaatctagcaggtcaggataag
tactccagcacaagaaaatcttatggtgactttcctcctgccacccttaagcaacagcag
ccctcccgccagcctcgcccagtttcagatggcatctttctttccaactcattccagtca
tctccagtcaatgccaacagtactactgccaaaaaaccccagcccccgcccccatcaaac
aaaccgagtttcatccattccagcagctctaaaggaataaattcatacactggatctaca
ggagcagctgctggggaagtttaccgggatccaagagacaaaagatctaaaagtcaagat
gcagatttacctggagcaccagaaaacctgacgttcagggaacgccaacgacttttttca
cagggtcaggatgtatccaataaagtaaaagcttctaggaaactaatggaactggaaaat
gagttgaacacaaaataa
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integrated database retrieval system